# STOCKHOLM 1.0 #=GF ID 1.25.40.10/FF/000459 #=GF DE Pentatricopeptide repeat-containing protein #=GF AC 1.25.40.10/FF/000459 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 75.068 #=GS A0A178WDL1/12-164 AC A0A178WDL1 #=GS A0A178WDL1/12-164 OS Arabidopsis thaliana #=GS A0A178WDL1/12-164 DE Uncharacterized protein #=GS A0A178WDL1/12-164 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LR72/12-164 AC Q9LR72 #=GS Q9LR72/12-164 OS Arabidopsis thaliana #=GS Q9LR72/12-164 DE Putative pentatricopeptide repeat-containing protein At1g03510 #=GS Q9LR72/12-164 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q10AH5/8-165 AC Q10AH5 #=GS Q10AH5/8-165 OS Oryza sativa Japonica Group #=GS Q10AH5/8-165 DE Os03g0852000 protein #=GS Q10AH5/8-165 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0P0X8U1/14-192 AC A0A0P0X8U1 #=GS A0A0P0X8U1/14-192 OS Oryza sativa Japonica Group #=GS A0A0P0X8U1/14-192 DE Os07g0578800 protein #=GS A0A0P0X8U1/14-192 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A078FRI0/12-162 AC A0A078FRI0 #=GS A0A078FRI0/12-162 OS Brassica napus #=GS A0A078FRI0/12-162 DE BnaA08g27460D protein #=GS A0A078FRI0/12-162 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS V4KFP7/12-163 AC V4KFP7 #=GS V4KFP7/12-163 OS Eutrema salsugineum #=GS V4KFP7/12-163 DE Uncharacterized protein #=GS V4KFP7/12-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS R0IKC5/12-163 AC R0IKC5 #=GS R0IKC5/12-163 OS Capsella rubella #=GS R0IKC5/12-163 DE Uncharacterized protein #=GS R0IKC5/12-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7KCF7/12-163 AC D7KCF7 #=GS D7KCF7/12-163 OS Arabidopsis lyrata subsp. lyrata #=GS D7KCF7/12-163 DE Pentatricopeptide repeat-containing protein #=GS D7KCF7/12-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A0D3DIP0/12-163 AC A0A0D3DIP0 #=GS A0A0D3DIP0/12-163 OS Brassica oleracea var. oleracea #=GS A0A0D3DIP0/12-163 DE Uncharacterized protein #=GS A0A0D3DIP0/12-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS I1GKR0/8-165 AC I1GKR0 #=GS I1GKR0/8-165 OS Brachypodium distachyon #=GS I1GKR0/8-165 DE Uncharacterized protein #=GS I1GKR0/8-165 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A0D9ZFX2/8-167 AC A0A0D9ZFX2 #=GS A0A0D9ZFX2/8-167 OS Oryza glumipatula #=GS A0A0D9ZFX2/8-167 DE Uncharacterized protein #=GS A0A0D9ZFX2/8-167 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0P405/8-166 AC A0A0E0P405 #=GS A0A0E0P405/8-166 OS Oryza rufipogon #=GS A0A0E0P405/8-166 DE Uncharacterized protein #=GS A0A0E0P405/8-166 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0EDK7/14-192 AC A0A0E0EDK7 #=GS A0A0E0EDK7/14-192 OS Oryza meridionalis #=GS A0A0E0EDK7/14-192 DE Uncharacterized protein #=GS A0A0E0EDK7/14-192 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0GWM6/8-165 AC A0A0E0GWM6 #=GS A0A0E0GWM6/8-165 OS Oryza sativa f. spontanea #=GS A0A0E0GWM6/8-165 DE Uncharacterized protein #=GS A0A0E0GWM6/8-165 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A078IQN0/12-163 AC A0A078IQN0 #=GS A0A078IQN0/12-163 OS Brassica napus #=GS A0A078IQN0/12-163 DE BnaC08g46300D protein #=GS A0A078IQN0/12-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0E0QAB2/378-556 AC A0A0E0QAB2 #=GS A0A0E0QAB2/378-556 OS Oryza rufipogon #=GS A0A0E0QAB2/378-556 DE Uncharacterized protein #=GS A0A0E0QAB2/378-556 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0I2T7/13-192 AC A0A0E0I2T7 #=GS A0A0E0I2T7/13-192 OS Oryza sativa f. spontanea #=GS A0A0E0I2T7/13-192 DE Uncharacterized protein #=GS A0A0E0I2T7/13-192 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A0E0ALU8/574-752 AC A0A0E0ALU8 #=GS A0A0E0ALU8/574-752 OS Oryza glumipatula #=GS A0A0E0ALU8/574-752 DE Uncharacterized protein #=GS A0A0E0ALU8/574-752 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0ALV0/14-192 AC A0A0E0ALV0 #=GS A0A0E0ALV0/14-192 OS Oryza glumipatula #=GS A0A0E0ALV0/14-192 DE Uncharacterized protein #=GS A0A0E0ALV0/14-192 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0QAB1/387-564 AC A0A0E0QAB1 #=GS A0A0E0QAB1/387-564 OS Oryza rufipogon #=GS A0A0E0QAB1/387-564 DE Uncharacterized protein #=GS A0A0E0QAB1/387-564 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0I2T8/13-191 AC A0A0E0I2T8 #=GS A0A0E0I2T8/13-191 OS Oryza sativa f. spontanea #=GS A0A0E0I2T8/13-191 DE Uncharacterized protein #=GS A0A0E0I2T8/13-191 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GF SQ 21 A0A178WDL1/12-164 LISLTKQLSSYANQGNHEQALNLFLQMHSSFAL-----PLDAHVFSL--ALKSCAAAFRPV-LGG---SVHAHSVKS-NFLSNPFVGCALLDMYGKC--LSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSY---- Q9LR72/12-164 LISLTKQLSSYANQGNHEQALNLFLQMHSSFAL-----PLDAHVFSL--ALKSCAAAFRPV-LGG---SVHAHSVKS-NFLSNPFVGCALLDMYGKC--LSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSY---- Q10AH5/8-165 LASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPL--ALKSSSALRLPS-AAAAADSLHALAAKC-GFLSSPFFASALVASYGAC--ASPAL--------------------ARRLFDELPHRNAIVCSAMISVHIRSGDLAGALRELDLM---DVAPTASCFNSVIAAVAESGE------- A0A0P0X8U1/14-192 --SWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A078FRI0/12-162 LITLTKQLSSYANQGSHEQALNLFRQMHSSFAL-----PLDAHVFSL--ALKSCAAAFRPL-LGA---SIHAHALKS-NFLSNPFVGSALLDMYGKC--VSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHCGNIREAVELYEAM---DVMPNESSFNAIIKGLVSTEDG------ V4KFP7/12-163 LISLTKQLSSYANQGNHEQALSLFRQMHSSFSL-----PLDAHVFSL--ALKSCAAAFRPV-LGA---SVHAHTLKS-NFLSNPFVGCALLDMYGKC--VSVSH--------------------ARKLFDEIPHRNAVVWNAMISNYTHCGKIREAVELYEAM---DVMPNESSFNAIIKGLVGTEDGS----- R0IKC5/12-163 LISLTKQLSSYANQGHHVQALNLFRQMHSSFAL-----PLDAHVFSL--ALKSCAAAFRPV-LGE---SVHAHSLKS-NFLANPFVGCALLDMYGKC--VSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHCGKIREAVELYEAM---DVLPNESSFNAIIKGLVGTEDGS----- D7KCF7/12-163 LISLTKQLSSYANQGFHEQALTLFRQMHSSFAL-----PLDAHVFSL--ALKSCAAAFHPV-LGG---SVHAHSVKS-NFLSNPFVGCALLDMYGKC--LSVTH--------------------ARKLFDEIPQRNAVVWNAMISHYTHCGKIQEAVELYEAM---DVMPNESSFNAIIKGFVGTEDGS----- A0A0D3DIP0/12-163 LITLTKQLSSYANQGNHEQALNLFRQMQSSFAL-----PLDAHVFSL--ALKSCAAAFRPA-LGE---SIHAHTLKS-NFLSNPFVGSALLDMYGKC--VSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHRGNIREAVELYEAM---DVMPNESSFNAIIKGLVSTEDGS----- I1GKR0/8-165 LASLTKQLTSHVNAGRHRDALAFFARMASDPALPPLSDPSFAYAFPL--ALKSAAALRVPS-AAA---TIHALAVKCGGLLCSPFVASALVASYGACGPSSPDV--------------------ARRLFDELPCRNGFVWSAMISVYARSGDVAAAVRALDLV---DVAPTASCFNSVIAAVVESGE------- A0A0D9ZFX2/8-167 LASLTKLLTSHVNAGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPL--ALKSSSALRLPSAAAAAADSLHALAAKC-GFLSSPFFASALVASYGAC--ASPAL--------------------ARRLFDELPHRNAIVCSAMISVHIRSGDLAGALRELDLM---DVAPTASCFNSVIAAVAESGEH------ A0A0E0P405/8-166 LASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPL--ALKSSSALRLPS-AAAAADSLHALAAKC-GFLSSPFFASALVASYGAC--ASPAL--------------------ARRLFDELPHRNAIVCSAMISVHIRSGDLAGALRELDLM---DVAPTASCFNSVIAAVAESGEH------ A0A0E0EDK7/14-192 --SWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTDGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A0E0GWM6/8-165 LASLTKLLTSHVNAGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPL--ALKSSSALRLPS-AAAAADSLHALAAKC-GFLSSPFFASALVASYGAC--ASPAL--------------------ARRLFDELPHRNAIVCSAMISVHIRSGDLAGALRELDLM---DVAPTASCFNSVIAAVAESGE------- A0A078IQN0/12-163 LITLTKQLSSYANQGNHEQALNLFRQMQSSFAL-----PLDAHVFSL--ALKSCAAAFRPA-LGE---SIHAHTLKS-NFLSNPFVGSALLDMYGKC--VSVSH--------------------ARKLFDEIPQRNAVVWNAMISHYTHRGNIREAVELYEAM---DVMPNESSFNAIIKGLVSTEDGS----- A0A0E0QAB2/378-556 --SWAYQIRMAASQGQFLHAISLFLQMRASVV------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTNGPSGEGGLESAAYESMRKVFDDMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A0E0I2T7/13-192 -TSWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTDGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSLVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A0E0ALU8/574-752 --SWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLKRDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A0E0ALV0/14-192 --SWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLKRDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV A0A0E0QAB1/387-564 --SWAYQIRMAASQGQFLHAISLFLQMRASVV------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTNGPSGEGGLESAAYESMRKVFDDMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV- A0A0E0I2T8/13-191 -TSWAYQIRMAASQGQFLHAISLFLQMRASVA------PRSSVPASLPAALKSCAGLGLCT-LAA---SLHALAIRS-GSFADRFTANALLNLCIKL--PGFHHPFGTDGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSLVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV- #=GC scorecons 32756566454665946359657947946646300000933644569119999676534540666000869956576065655594659975465650046445111101111111111111115976998564968757666953555454446964445481116669545466576445654472211110 #=GC scorecons_70 __*_*_**___**_*____**_**_**_**________*__*___**__*******_______**___*_**_*_**___*___*_*_***__*______*________________________******___****_*****__________***_____*___*__*____**_**_______*_______ #=GC scorecons_80 __*___________*____*___*__*___________*_______*__****_______________*_**___*________*___**___________________________________**_***___*_*______*___________*______*______*_______*________*_______ #=GC scorecons_90 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