# STOCKHOLM 1.0 #=GF ID 1.25.40.10/FF/000412 #=GF DE Putative pentatricopeptide repeat-containing protein #=GF AC 1.25.40.10/FF/000412 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 96.808 #=GS Q9FNN9/469-593 AC Q9FNN9 #=GS Q9FNN9/469-593 OS Arabidopsis thaliana #=GS Q9FNN9/469-593 DE Putative pentatricopeptide repeat-containing protein At5g08490 #=GS Q9FNN9/469-593 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FNN9/469-593 DR GO; GO:0005739; GO:0009414; GO:0009737; GO:0080156; #=GS A0A1P8BEU2/469-591 AC A0A1P8BEU2 #=GS A0A1P8BEU2/469-591 OS Arabidopsis thaliana #=GS A0A1P8BEU2/469-591 DE Tetratricopeptide repeat (TPR)-like superfamily protein #=GS A0A1P8BEU2/469-591 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178VL32/266-391 AC A0A178VL32 #=GS A0A178VL32/266-391 OS Arabidopsis thaliana #=GS A0A178VL32/266-391 DE Uncharacterized protein #=GS A0A178VL32/266-391 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9SR01/266-391 AC Q9SR01 #=GS Q9SR01/266-391 OS Arabidopsis thaliana #=GS Q9SR01/266-391 DE Pentatricopeptide repeat-containing protein At3g04750, mitochondrial #=GS Q9SR01/266-391 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F6H7D1/319-460 AC F6H7D1 #=GS F6H7D1/319-460 OS Vitis vinifera #=GS F6H7D1/319-460 DE Uncharacterized protein #=GS F6H7D1/319-460 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS Q6K892/526-670 AC Q6K892 #=GS Q6K892/526-670 OS Oryza sativa Japonica Group #=GS Q6K892/526-670 DE Os02g0290000 protein #=GS Q6K892/526-670 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS D7TB26/428-549 AC D7TB26 #=GS D7TB26/428-549 OS Vitis vinifera #=GS D7TB26/428-549 DE Uncharacterized protein #=GS D7TB26/428-549 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS F6GX26/154-281 AC F6GX26 #=GS F6GX26/154-281 OS Vitis vinifera #=GS F6GX26/154-281 DE Uncharacterized protein #=GS F6GX26/154-281 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A0A0P0W2R9/256-369 AC A0A0P0W2R9 #=GS A0A0P0W2R9/256-369 OS Oryza sativa Japonica Group #=GS A0A0P0W2R9/256-369 DE Os03g0743200 protein #=GS A0A0P0W2R9/256-369 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A445KAH7/493-625 AC A0A445KAH7 #=GS A0A445KAH7/493-625 OS Glycine soja #=GS A0A445KAH7/493-625 DE Putative pentatricopeptide repeat-containing protein #=GS A0A445KAH7/493-625 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS B9H423/469-607 AC B9H423 #=GS B9H423/469-607 OS Populus trichocarpa #=GS B9H423/469-607 DE Uncharacterized protein #=GS B9H423/469-607 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A3L6G884/508-633 AC A0A3L6G884 #=GS A0A3L6G884/508-633 OS Zea mays #=GS A0A3L6G884/508-633 DE Putative pentatricopeptide repeat-containing protein #=GS A0A3L6G884/508-633 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS D7M1C9/467-591 AC D7M1C9 #=GS D7M1C9/467-591 OS Arabidopsis lyrata subsp. lyrata #=GS D7M1C9/467-591 DE Pentatricopeptide repeat-containing protein #=GS D7M1C9/467-591 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS I1GNG2/249-372 AC I1GNG2 #=GS I1GNG2/249-372 OS Brachypodium distachyon #=GS I1GNG2/249-372 DE Uncharacterized protein #=GS I1GNG2/249-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS I1KBU0/493-625 AC I1KBU0 #=GS I1KBU0/493-625 OS Glycine max #=GS I1KBU0/493-625 DE Uncharacterized protein #=GS I1KBU0/493-625 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS I1NZI9/522-666 AC I1NZI9 #=GS I1NZI9/522-666 OS Oryza glaberrima #=GS I1NZI9/522-666 DE Uncharacterized protein #=GS I1NZI9/522-666 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0E0JYL4/526-670 AC A0A0E0JYL4 #=GS A0A0E0JYL4/526-670 OS Oryza punctata #=GS A0A0E0JYL4/526-670 DE Uncharacterized protein #=GS A0A0E0JYL4/526-670 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0ND95/524-668 AC A0A0E0ND95 #=GS A0A0E0ND95/524-668 OS Oryza rufipogon #=GS A0A0E0ND95/524-668 DE Uncharacterized protein #=GS A0A0E0ND95/524-668 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0G509/521-669 AC A0A0E0G509 #=GS A0A0E0G509/521-669 OS Oryza sativa f. spontanea #=GS A0A0E0G509/521-669 DE Uncharacterized protein #=GS A0A0E0G509/521-669 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS I1JXT7/404-518 AC I1JXT7 #=GS I1JXT7/404-518 OS Glycine max #=GS I1JXT7/404-518 DE Uncharacterized protein #=GS I1JXT7/404-518 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7TTG1/508-633 AC K7TTG1 #=GS K7TTG1/508-633 OS Zea mays #=GS K7TTG1/508-633 DE Putative pentatricopeptide repeat-containing protein #=GS K7TTG1/508-633 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS D7L2Y2/267-395 AC D7L2Y2 #=GS D7L2Y2/267-395 OS Arabidopsis lyrata subsp. lyrata #=GS D7L2Y2/267-395 DE Pentatricopeptide repeat-containing protein #=GS D7L2Y2/267-395 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A1D6L3Q1/253-378 AC A0A1D6L3Q1 #=GS A0A1D6L3Q1/253-378 OS Zea mays #=GS A0A1D6L3Q1/253-378 DE Methyltransferase small domain #=GS A0A1D6L3Q1/253-378 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0E0P150/258-377 AC A0A0E0P150 #=GS A0A0E0P150/258-377 OS Oryza rufipogon #=GS A0A0E0P150/258-377 DE Uncharacterized protein #=GS A0A0E0P150/258-377 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS I1PFC5/263-376 AC I1PFC5 #=GS I1PFC5/263-376 OS Oryza glaberrima #=GS I1PFC5/263-376 DE Uncharacterized protein #=GS I1PFC5/263-376 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GF SQ 25 Q9FNN9/469-593 ------------------EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS--TTDLTTWSLMVRIYAESCCPNEAI-GVFREI-QARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY-------- A0A1P8BEU2/469-591 ------------------EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS--TTDLTTWSLMVRIYAESCCPNEAI-GVFREI-QARGMRPNTVTIMNLLPVCAQLASLHLVRQCH---------- A0A178VL32/266-391 ----------------SSNLILSNALLDMYFKCKESGLAKRAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH---------- Q9SR01/266-391 ----------------SSNLILSNALLDMYFKCKESGLAKRAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH---------- F6H7D1/319-460 ------IHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFS-VKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEAL-SMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVV----- Q6K892/526-670 ----QESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLA-GRNIVTGNTMISCYLKNNCVEDAEMTFNHMA--EKDLTTWNLMSRLYAQNDLCDQAF-CLFHQL-QSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE- D7TB26/428-549 -------------------PTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMS--ETDLTTWNLMVRVYAENDFPDQAL-SLFHEL-QGQGMKPDIVTIMSILPACAHMASVHMLRQCH---------- F6GX26/154-281 ----KGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMA-EKDTVSWNIMMSSYLQIGDMQKSVDLFRQLP--GKDAASWNTMIDGLMRNGCERVAL-ELLYKM-VAAGPAFNKLTFSIALVLASSLSV------------------ A0A0P0W2R9/256-369 ----------------DRGLILSNALLDMYAKCGEMNTAMRVFDEAG-ERDGISWNTMVAGFANAGLLDLASKYFGEAP--ARDIISWNALLAGYARYEEFSATM-ILFHDM-LASSVIPDKVTAVTLISAVAGK-------------------- A0A445KAH7/493-625 ------------------APTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMS--ETDLTTWNLMVRVYAENDCPEQAL-GLCHEL-QARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFKD B9H423/469-607 --------HRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMP--SSDLSVWNLMVRLYAENDCSSQAL-GLFHEL-QAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRS---- A0A3L6G884/508-633 --------GWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHA-GRNIVTDNIMISCYLKSNCIEDAEVIFNHMA--EKDLTSWNLMIQLYAQNDMDGQAF-SLFNHL-QSEGLKPDIVSIANILEACIHLCSVQ---------------- D7M1C9/467-591 ----------------EEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMS--TTDLTTWSLMVRIYAESCFPNEAI-GVFREI-QARGMRPNTVTIMNLLPVCAQLASLHLVRQCH---------- I1GNG2/249-372 -------------DIKDRGLILSNALLDMYAKCGEMNTAMRVFGEAK-EKDDISWNTMIAGFANDGMLDLASKFFFDAP--CRDLISWNTLLAGYGRCREFAAVM-ELFNDM-LSSRVRPDKVTAVTLISAAVSKGALNLGK------------- I1KBU0/493-625 ------------------APTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMS--ETDLTTWNLMVRVYAENDCPEQAL-GLCHEL-QARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFKD I1NZI9/522-666 IKMVRESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLA-GRNIVTGNTMISCYLKNNCVEDAEMTFNHMA--EKDLTTWNLMSRLYAQNDLCDQAF-CLFHQL-QSEGLSPDTISITNILSACIHLSSVQLVKQCHGYMLR----- A0A0E0JYL4/526-670 -----ESHGYSLRVGYTGDSSVANAILDVYAKCGYLHDAETFFRSLA-GRNIVTDNTMISCYLKNNCVEDAEMTFNQMA--EKDLTTWNLMSRLYAQNNLCDQAF-CLFHQL-QSEGLNPDTISITNILLACIHLSSVQLVKQCHGYMLRASLED A0A0E0ND95/524-668 ----RESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLA-VRNIVTDNTMISCYLKNNCVEDAEMTFNHMA--EKDLTTWNLMSRLYAQNDLCDQAF-CLFHQL-QSEGLNPDTISITNILLACIHLSSVQLVKQCHGYMLRASLE- A0A0E0G509/521-669 IKMVRESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLA-GRNIVTGNTMISCYLKNNCVEDAEMTFNHMA--EKDLTTWNLMSRLYAQNDLCDQAF-CLFHQL-QSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE- I1JXT7/404-518 ---------------SDAAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDAHMIFSGMS--ETDLTTRNLMVRVYAENDCPEQAL-GLCYEL-QARGMKSDTVTIMSLLPVCTG--------------------- K7TTG1/508-633 --------GWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHA-GRNIVTDNIMISCYLKSNCIEDAEVIFNHMA--EKDLTSWNLMIQLYAQNDMDGQAF-SLFNHL-QSEGLKPDIVSIANILEACIHLCSVQ---------------- D7L2Y2/267-395 ------------------NLILRNALLDMYFKCKESGLAKRAFDALK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--QRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIR----- A0A1D6L3Q1/253-378 -------------DAGDHGLILVNALLDMYAKCGRMNAAKTIFGETG-EKDAISWNTMVSGFVNAGMLDLASRFFSEAP--SRDLISWNALLAGYARYKSFNEVM-KLFHDM-VASCVNLDKVTAVTLISAATGKGSLNHAKSV----------- A0A0E0P150/258-377 -----------RISVADRGLILSNALLDMYAKCGEMNTAMRVFDEAG-ERDGISWNTMVAGFANAGLLDLASKYFGEAP--ARDIISWNALLAGYARYEEFSATM-ILFHDM-LASSVIPDKVTAVTLISAVAGKG------------------- I1PFC5/263-376 ----------------DRGLILSNALLDMYAKCGEMNTAMRVFDEAG-ERDGISWNTMVAGFANAGLLDLASKYFGEAP--ARDIISWNALLAGYARYEEFSATM-ILFHDM-LASSVIPDKVTAVTLISAVAGK-------------------- #=GC scorecons 00000000100111112244464976894948963443934493344047546638576557543634548334944650045965587474438654433446403775560454554774765456645554334322232231100100000 #=GC scorecons_70 _____________________*_*****_*_***____*___*______*_____*_**__*________*___*__*_____**__**_*___**_______*___**__*_______**_**____*__________________________ #=GC scorecons_80 _______________________**_**_*_**_____*___*______*_____*_*___*________*___*________*___**_____*____________**___________*__________________________________ #=GC scorecons_90 _______________________*__**_*_**_____*___*____________*______________*___*________*___*______*____________________________________________________________ //