# STOCKHOLM 1.0 #=GF ID 1.25.40.10/FF/000408 #=GF DE Pentatricopeptide repeat domain 1 #=GF AC 1.25.40.10/FF/000408 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 35.472 #=GS O75127/143-224 AC O75127 #=GS O75127/143-224 OS Homo sapiens #=GS O75127/143-224 DE Pentatricopeptide repeat-containing protein 1, mitochondrial #=GS O75127/143-224 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS O75127/143-224 DR GO; GO:0000049; GO:0003723; GO:0005739; GO:0005759; GO:0042780; #=GS Q5R655/141-220 AC Q5R655 #=GS Q5R655/141-220 OS Pongo abelii #=GS Q5R655/141-220 DE Pentatricopeptide repeat-containing protein 1, mitochondrial #=GS Q5R655/141-220 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS Q5R655/141-220 DR GO; GO:0000049; GO:0005759; GO:0042780; #=GS G3V325/189-271 AC G3V325 #=GS G3V325/189-271 OS Homo sapiens #=GS G3V325/189-271 DE ATP5MF-PTCD1 readthrough #=GS G3V325/189-271 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A4D273/143-224 AC A4D273 #=GS A4D273/143-224 OS Homo sapiens #=GS A4D273/143-224 DE Pentatricopeptide repeat domain 1 #=GS A4D273/143-224 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS F1RNS9/108-188 AC F1RNS9 #=GS F1RNS9/108-188 OS Sus scrofa #=GS F1RNS9/108-188 DE Uncharacterized protein #=GS F1RNS9/108-188 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS F1RNS9/108-188 DR GO; GO:0000049; GO:0003723; GO:0005739; GO:0005759; GO:0042780; #=GS H0UX11/147-228 AC H0UX11 #=GS H0UX11/147-228 OS Cavia porcellus #=GS H0UX11/147-228 DE Uncharacterized protein #=GS H0UX11/147-228 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Caviidae; Cavia; Cavia porcellus; #=GS A0A2K6FIU0/141-225 AC A0A2K6FIU0 #=GS A0A2K6FIU0/141-225 OS Propithecus coquereli #=GS A0A2K6FIU0/141-225 DE Uncharacterized protein #=GS A0A2K6FIU0/141-225 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; #=GS A0A2K6T532/142-223 AC A0A2K6T532 #=GS A0A2K6T532/142-223 OS Saimiri boliviensis boliviensis #=GS A0A2K6T532/142-223 DE Uncharacterized protein #=GS A0A2K6T532/142-223 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; #=GS A0A2K5HRX4/141-222 AC A0A2K5HRX4 #=GS A0A2K5HRX4/141-222 OS Colobus angolensis palliatus #=GS A0A2K5HRX4/141-222 DE Uncharacterized protein #=GS A0A2K5HRX4/141-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS G1RJM7/34-114 AC G1RJM7 #=GS G1RJM7/34-114 OS Nomascus leucogenys #=GS G1RJM7/34-114 DE Uncharacterized protein #=GS G1RJM7/34-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; #=GS F7IAC7/143-222 AC F7IAC7 #=GS F7IAC7/143-222 OS Callithrix jacchus #=GS F7IAC7/143-222 DE Uncharacterized protein #=GS F7IAC7/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; #=GS A0A0D9RYX8/142-223 AC A0A0D9RYX8 #=GS A0A0D9RYX8/142-223 OS Chlorocebus sabaeus #=GS A0A0D9RYX8/142-223 DE Uncharacterized protein #=GS A0A0D9RYX8/142-223 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; #=GS G3S810/139-223 AC G3S810 #=GS G3S810/139-223 OS Gorilla gorilla gorilla #=GS G3S810/139-223 DE Uncharacterized protein #=GS G3S810/139-223 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS A0A2K6MVU9/141-222 AC A0A2K6MVU9 #=GS A0A2K6MVU9/141-222 OS Rhinopithecus bieti #=GS A0A2K6MVU9/141-222 DE Uncharacterized protein #=GS A0A2K6MVU9/141-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GS H2QV03/143-223 AC H2QV03 #=GS H2QV03/143-223 OS Pan troglodytes #=GS H2QV03/143-223 DE Uncharacterized protein #=GS H2QV03/143-223 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS G7P0A6/143-222 AC G7P0A6 #=GS G7P0A6/143-222 OS Macaca fascicularis #=GS G7P0A6/143-222 DE Uncharacterized protein #=GS G7P0A6/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS A0A2K5NEX0/143-222 AC A0A2K5NEX0 #=GS A0A2K5NEX0/143-222 OS Cercocebus atys #=GS A0A2K5NEX0/143-222 DE Uncharacterized protein #=GS A0A2K5NEX0/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS A0A096NGE8/143-222 AC A0A096NGE8 #=GS A0A096NGE8/143-222 OS Papio anubis #=GS A0A096NGE8/143-222 DE Uncharacterized protein #=GS A0A096NGE8/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; #=GS A0A2K6Q975/141-222 AC A0A2K6Q975 #=GS A0A2K6Q975/141-222 OS Rhinopithecus roxellana #=GS A0A2K6Q975/141-222 DE Uncharacterized protein #=GS A0A2K6Q975/141-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; #=GS A0A1D5Q3R2/192-271 AC A0A1D5Q3R2 #=GS A0A1D5Q3R2/192-271 OS Macaca mulatta #=GS A0A1D5Q3R2/192-271 DE Uncharacterized protein #=GS A0A1D5Q3R2/192-271 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS A0A2K6E1F6/143-222 AC A0A2K6E1F6 #=GS A0A2K6E1F6/143-222 OS Macaca nemestrina #=GS A0A2K6E1F6/143-222 DE Uncharacterized protein #=GS A0A2K6E1F6/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; #=GS A0A287A478/108-190 AC A0A287A478 #=GS A0A287A478/108-190 OS Sus scrofa #=GS A0A287A478/108-190 DE Uncharacterized protein #=GS A0A287A478/108-190 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS F7DP81/143-222 AC F7DP81 #=GS F7DP81/143-222 OS Macaca mulatta #=GS F7DP81/143-222 DE Uncharacterized protein #=GS F7DP81/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS A0A2K5WVI4/143-222 AC A0A2K5WVI4 #=GS A0A2K5WVI4/143-222 OS Macaca fascicularis #=GS A0A2K5WVI4/143-222 DE Uncharacterized protein #=GS A0A2K5WVI4/143-222 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS H2PLI8/103-181 AC H2PLI8 #=GS H2PLI8/103-181 OS Pongo abelii #=GS H2PLI8/103-181 DE Uncharacterized protein #=GS H2PLI8/103-181 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GF SQ 25 O75127/143-224 ----CKHLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWK- Q5R655/141-220 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAESP--- G3V325/189-271 -FLQCKHLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESP--- A4D273/143-224 ----CKHLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWK- F1RNS9/108-188 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPLECNYTVLIGGCGRTGYLKKAFRLYNDMKKRDLEPSDATYTALFNVCAESPW-- H0UX11/147-228 ----CKRLIKEG----KLAEALELFERQMLKEERLQPLECNYTVLIGGCGRAGYLKKAFRLYNDMKKRDLEPSDATYTALFNVCAESPWK- A0A2K6FIU0/141-225 YFLQCKRLIKEG----KLAEALDLFERQMLKEERLQPLESNYTVLIGGCGRAGYLKKAFMLYNDMKKRELEPSDATYTALFNVCAESPW-- A0A2K6T532/142-223 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNEMKKRGLEPSDATYTALFNVCAESPWK- A0A2K5HRX4/141-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPTESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESPWK- G1RJM7/34-114 --------GREGLMWPVLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESPW-- F7IAC7/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRTGYLKKAFKLYNEMKKRGLEPSDATYTALFNVCAESP--- A0A0D9RYX8/142-223 --LQCKRLIKEG----KLVEALDLFERQMLKEERVQPMESNYTVLIGGCGRVGYLRKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- G3S810/139-223 YFLQCKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAESPW-- A0A2K6MVU9/141-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPTESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESPWK- H2QV03/143-223 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPW-- G7P0A6/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A2K5NEX0/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A096NGE8/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A2K6Q975/141-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPTESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESPWK- A0A1D5Q3R2/192-271 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A2K6E1F6/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A287A478/108-190 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPLECNYTVLIGGCGRTGYLKKAFRLYNDMKKRDLEPSDATYTALFNVCAESPWKD F7DP81/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- A0A2K5WVI4/143-222 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESP--- H2PLI8/103-181 ----CKRLIKEG----KLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALFNVCAES---- #=GC scorecons 0000776778990000797999899999999999899697999899999996999899949996999979999999999999999998300 #=GC scorecons_70 ____**_*****____*******************************************_****************************___ #=GC scorecons_80 ____**_*****____*********************_*************_*******_***_************************___ #=GC scorecons_90 _________***_____*_******************_*_***********_*******_***_****_*******************___ //