# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/001011
#=GF DE Mitochondrial splicing system-related protein
#=GF AC 1.25.40.10/FF/001011
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 6.572
#=GS P40990/100-242_275-341      AC P40990
#=GS P40990/100-242_275-341      OS Saccharomyces cerevisiae S288C
#=GS P40990/100-242_275-341      DE Protein MSS2, mitochondrial
#=GS P40990/100-242_275-341      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P40990/100-242_275-341      DR GO; GO:0005759; GO:0031314; GO:0032979; 
#=GS A0A0L8VSH0/100-242_275-348  AC A0A0L8VSH0
#=GS A0A0L8VSH0/100-242_275-348  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VSH0/100-242_275-348  DE MSS2p Peripherally bound inner membrane protein of the mitochondrial matrix
#=GS A0A0L8VSH0/100-242_275-348  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS H0GDP5/100-242_275-348      AC H0GDP5
#=GS H0GDP5/100-242_275-348      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GDP5/100-242_275-348      DE Mss2p
#=GS H0GDP5/100-242_275-348      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS N1PA92/100-242_275-341      AC N1PA92
#=GS N1PA92/100-242_275-341      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1PA92/100-242_275-341      DE Mss2p
#=GS N1PA92/100-242_275-341      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VFG1/100-242_275-348      AC B5VFG1
#=GS B5VFG1/100-242_275-348      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VFG1/100-242_275-348      DE YDL107Wp-like protein
#=GS B5VFG1/100-242_275-348      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LGZ8/100-242_275-348      AC B3LGZ8
#=GS B3LGZ8/100-242_275-348      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LGZ8/100-242_275-348      DE Cox2 pre-mRNA splicing factor
#=GS B3LGZ8/100-242_275-348      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z6J7/100-242_275-348      AC C8Z6J7
#=GS C8Z6J7/100-242_275-348      OS Saccharomyces cerevisiae EC1118
#=GS C8Z6J7/100-242_275-348      DE Mss2p
#=GS C8Z6J7/100-242_275-348      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WC55/101-242_275-344      AC G2WC55
#=GS G2WC55/101-242_275-344      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WC55/101-242_275-344      DE K7_Mss2p
#=GS G2WC55/101-242_275-344      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZXM2/100-242_275-348      AC A6ZXM2
#=GS A6ZXM2/100-242_275-348      OS Saccharomyces cerevisiae YJM789
#=GS A6ZXM2/100-242_275-348      DE Mitochondrial splicing system-related protein
#=GS A6ZXM2/100-242_275-348      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 9
P40990/100-242_275-341              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANEFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGNDKDKKTMINVFLESRKD-------
A0A0L8VSH0/100-242_275-348          DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
H0GDP5/100-242_275-348              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKIYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
N1PA92/100-242_275-341              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANEFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGNDKDKKTMINVFLESRKD-------
B5VFG1/100-242_275-348              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
B3LGZ8/100-242_275-348              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
C8Z6J7/100-242_275-348              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
G2WC55/101-242_275-344              -KLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANEFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLESSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERSSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGNDKDKKTMINVFLESRKDSIK----
A6ZXM2/100-242_275-348              DKLLNIAAELGNNDAISILSFNVIHEYKKENVKSSYEKDIETANKFIKKLYARNHHLTVKLIGDLFFENKTYDKAEKYYQEFLKLENSTKLAGEVHGKLGEIQIKQVNGFLKAEKSWLSCIELLEIERCSRWYFLLARLYMSSNNYERAKEWFKTGMEIMDLECFFGFFDCCVKEENFKGARDCLESVKKLGSDNDKKTMINVFLESRKDSIKLLDK
#=GC scorecons                      6999999999999999999999999999999999999999999959999999999999999999999999799999999999999979999999999999999999999999999999999999999979999999999999999999999999999999999999999999999999999999999999995959999999999999993332222
#=GC scorecons_70                   _*******************************************_***************************************************************************************************************************************************_*_***************_______
#=GC scorecons_80                   _*******************************************_***************************************************************************************************************************************************_*_***************_______
#=GC scorecons_90                   _*******************************************_*************************_***************_*****************************************_***************************************************************_*_***************_______
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