# STOCKHOLM 1.0
#=GF ID 1.25.10.10/FF/000707
#=GF DE MMS19 nucleotide excision repair protein-like protein
#=GF AC 1.25.10.10/FF/000707
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 55.914
#=GS Q0WVF8/875-1131      AC Q0WVF8
#=GS Q0WVF8/875-1131      OS Arabidopsis thaliana
#=GS Q0WVF8/875-1131      DE MMS19 nucleotide excision repair protein homolog
#=GS Q0WVF8/875-1131      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A0Q3NT31/696-935   AC A0A0Q3NT31
#=GS A0A0Q3NT31/696-935   OS Brachypodium distachyon
#=GS A0A0Q3NT31/696-935   DE Uncharacterized protein
#=GS A0A0Q3NT31/696-935   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A1D6HTI0/919-1123  AC A0A1D6HTI0
#=GS A0A1D6HTI0/919-1123  OS Zea mays
#=GS A0A1D6HTI0/919-1123  DE MMS19 nucleotide excision repair protein-like protein
#=GS A0A1D6HTI0/919-1123  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS D7ML19/863-1123      AC D7ML19
#=GS D7ML19/863-1123      OS Arabidopsis lyrata subsp. lyrata
#=GS D7ML19/863-1123      DE Binding protein
#=GS D7ML19/863-1123      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A1B6Q9B9/911-1122  AC A0A1B6Q9B9
#=GS A0A1B6Q9B9/911-1122  OS Sorghum bicolor
#=GS A0A1B6Q9B9/911-1122  DE Uncharacterized protein
#=GS A0A1B6Q9B9/911-1122  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS I1H360/899-1137      AC I1H360
#=GS I1H360/899-1137      OS Brachypodium distachyon
#=GS I1H360/899-1137      DE Uncharacterized protein
#=GS I1H360/899-1137      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A1D6HTH0/727-931   AC A0A1D6HTH0
#=GS A0A1D6HTH0/727-931   OS Zea mays
#=GS A0A1D6HTH0/727-931   DE MMS19 nucleotide excision repair protein-like protein
#=GS A0A1D6HTH0/727-931   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6HTG6/906-1110  AC A0A1D6HTG6
#=GS A0A1D6HTG6/906-1110  OS Zea mays
#=GS A0A1D6HTG6/906-1110  DE MMS19 nucleotide excision repair protein-like protein
#=GS A0A1D6HTG6/906-1110  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6HTH2/687-891   AC A0A1D6HTH2
#=GS A0A1D6HTH2/687-891   OS Zea mays
#=GS A0A1D6HTH2/687-891   DE MMS19 nucleotide excision repair protein-like protein
#=GS A0A1D6HTH2/687-891   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 9
Q0WVF8/875-1131              S------------LDLQTRAITGLAWIGKGLLMRGNERVNEIALVLVECLKS------------NNCSGHALHPSAMKHAADAFSIIMSDSEVCLNRKFHAVIRPLYKQRCFSTIVPILESLIMNSQTSLSRTMLHVALAHVISNVPVTVILDNTKKLQPLILEGLSVLSLDSVEKETLFSLLLVLSGTLTDTKGQQSASDNAHIIIECLIKLTSYPHLMVVRETSIQCLVALLELPHRRIYPFRREVLQAIEKSLDDPKRKVREEAIRCRQAWASITSGS
A0A0Q3NT31/696-935           ---------------------------------RGDEKVKDVSMFLLKCLVSDQNSVNVQPYQKTQNDNVSSDASLATSAADAFHVMMSDSEVCLNKKFHAKIKLLYKQRFFSILMPIFLSKIKETPVLTTKLVLYRAFGHIISNAPVSAVITEAHQILLVMVDSLAKLSVDIQDKDLVYNMLLVLSGMLMDEKGKECILENIHIVVSVLTQLVSYPHMMVVRETALQCFVAMSSFPHSKMYRMRPQVLQAASKALDDKKRAVRQEAVRCRQT--------
A0A1D6HTI0/919-1123          -------------------------------------------------------------------GGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLSKIKETTVVTTKLALYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKIYPVRRKVVQAAVRALDDKKRAVRRVAVRCRH---------
D7ML19/863-1123              TTLSKICLGYCGYLDLQTRTITGLAWIGKGLLMRGYERVNEIALVLVECLKS------------TNCSGHALHPSAMKHAADAFSTLMSDSEVCLNRKFHAVVRPLYKQRFFSTIVPILESLIMNSQTPLSRTMLYVALAHVISNVPVTVILDNTKKLQPLILEGLSVLSLDSVEKETVFSLLLVLSGTLTDTKGQQSASDNAHIIIECLIKLTSYPHLMVVRETAIQCLVALLELPHRRIYPFRREVLQAIEKSLDDPKRRVREEAIRCRQA--------
A0A1B6Q9B9/911-1122          -------------------------------------------------------------HQEEPYSGNSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSILMPIFLSKIKETTAVTTKLAVYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSLDIEDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTLPHSKIYPMRRKVVQAAIKALDDKKRAVRQAAVRCRQT--------
I1H360/899-1137              ----------------------------------GDEKVKDVSMFLLKCLVSDQNSVNVQPYQKTQNDNVSSDASLATSAADAFHVMMSDSEVCLNKKFHAKIKLLYKQRFFSILMPIFLSKIKETPVLTTKLVLYRAFGHIISNAPVSAVITEAHQILLVMVDSLAKLSVDIQDKDLVYNMLLVLSGMLMDEKGKECILENIHIVVSVLTQLVSYPHMMVVRETALQCFVAMSSFPHSKMYRMRPQVLQAASKALDDKKRAVRQEAVRCRQT--------
A0A1D6HTH0/727-931           -------------------------------------------------------------------GGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLSKIKETTVVTTKLALYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKIYPVRRKVVQAAVRALDDKKRAVRRVAVRCRH---------
A0A1D6HTG6/906-1110          -------------------------------------------------------------------GGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLSKIKETTVVTTKLALYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKIYPVRRKVVQAAVRALDDKKRAVRRVAVRCRH---------
A0A1D6HTH2/687-891           -------------------------------------------------------------------GGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLSKIKETTVVTTKLALYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKIYPVRRKVVQAAVRALDDKKRAVRRVAVRCRH---------
#=GC scorecons               00000000000000000000000000000000012021211111121122120000000000002114636555955359959956699999699979999477699999699656996494956645456754874966979996995676566666556667696499594379757767999699595959966655795695755965959999699999976997995546995779649659699537699959959954979996200000000
#=GC scorecons_70            ____________________________________________________________________*_____*____**_**__***************_***********__****_*_*________*__**_**_*****_**__**__*_**__****_*__**_*__***_**********_*_*_****___**_**_*__*__*_******************____**_****_**_****__*_***_**_**__******_________
#=GC scorecons_80            __________________________________________________________________________*____**_**___*****_***_****_*__*****_**___**__*_*___________**_*__*_***_**_________________*__**_*___*__**_****_**_*_*_**_____**__*_*__*__*_****_******__**_**____**__**__*__*_**__*_***_**_**__*_***__________
#=GC scorecons_90            __________________________________________________________________________*____**_**___*****_***_****____*****_**___**__*_*___________*__*__*_***_**_________________*__**_*___*______***_**_*_*_**______*__*____*__*_****_******__**_**____**___*__*__*_**____***_**_**__*_***__________
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