# STOCKHOLM 1.0
#=GF ID 1.20.144.10/FF/000032
#=GF DE PAP2 superfamily protein
#=GF AC 1.20.144.10/FF/000032
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 98.178
#=GS A2FQV1/9-252   AC A2FQV1
#=GS A2FQV1/9-252   OS Trichomonas vaginalis
#=GS A2FQV1/9-252   DE PAP2 superfamily protein
#=GS A2FQV1/9-252   DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2EKG7/22-245  AC A2EKG7
#=GS A2EKG7/22-245  OS Trichomonas vaginalis
#=GS A2EKG7/22-245  DE PAP2 superfamily protein
#=GS A2EKG7/22-245  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2ES10/16-247  AC A2ES10
#=GS A2ES10/16-247  OS Trichomonas vaginalis
#=GS A2ES10/16-247  DE PAP2 superfamily protein
#=GS A2ES10/16-247  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2DI86/2-201   AC A2DI86
#=GS A2DI86/2-201   OS Trichomonas vaginalis
#=GS A2DI86/2-201   DE PAP2 superfamily protein
#=GS A2DI86/2-201   DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2D810/9-248   AC A2D810
#=GS A2D810/9-248   OS Trichomonas vaginalis
#=GS A2D810/9-248   DE PAP2 superfamily protein
#=GS A2D810/9-248   DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2DYB5/20-264  AC A2DYB5
#=GS A2DYB5/20-264  OS Trichomonas vaginalis
#=GS A2DYB5/20-264  DE PAP2 superfamily protein
#=GS A2DYB5/20-264  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2EPP6/19-259  AC A2EPP6
#=GS A2EPP6/19-259  OS Trichomonas vaginalis
#=GS A2EPP6/19-259  DE PAP2 superfamily protein
#=GS A2EPP6/19-259  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2F6F1/11-261  AC A2F6F1
#=GS A2F6F1/11-261  OS Trichomonas vaginalis
#=GS A2F6F1/11-261  DE PAP2 superfamily protein
#=GS A2F6F1/11-261  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2FWS2/17-258  AC A2FWS2
#=GS A2FWS2/17-258  OS Trichomonas vaginalis
#=GS A2FWS2/17-258  DE PAP2 superfamily protein
#=GS A2FWS2/17-258  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2EZR4/7-240   AC A2EZR4
#=GS A2EZR4/7-240   OS Trichomonas vaginalis
#=GS A2EZR4/7-240   DE PAP2 superfamily protein
#=GS A2EZR4/7-240   DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2F5R7/14-235  AC A2F5R7
#=GS A2F5R7/14-235  OS Trichomonas vaginalis
#=GS A2F5R7/14-235  DE PAP2 superfamily protein
#=GS A2F5R7/14-235  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2F9V4/44-238  AC A2F9V4
#=GS A2F9V4/44-238  OS Trichomonas vaginalis
#=GS A2F9V4/44-238  DE PAP2 superfamily protein
#=GS A2F9V4/44-238  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2DNA2/14-246  AC A2DNA2
#=GS A2DNA2/14-246  OS Trichomonas vaginalis
#=GS A2DNA2/14-246  DE PAP2 superfamily protein
#=GS A2DNA2/14-246  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2EQG2/13-244  AC A2EQG2
#=GS A2EQG2/13-244  OS Trichomonas vaginalis
#=GS A2EQG2/13-244  DE PAP2 superfamily protein
#=GS A2EQG2/13-244  DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GF SQ 14
A2FQV1/9-252           ----DIVELFCMIACVAAWVGFSFLTPNHLYLPPQNAEYNYPYKSREIIPVVVLEIITFPGVWLFFIMFYFIQKKLTKIFKQFNIFPLIWTHISTVSITNSVVLILQNFVGRAGVDFYSRCGAS----ATPDTCT-FLDKNTLHDLLRSFPSTHAASAMSSYLFFTLYLQKLIKYKSTPLTILEFLPVFVGLWIGATRITDYKAHPCDVVAGYVIGTLITLVFWKTSK--HVVFKVINSDDDEN-NEKHEVEQSLV-------
A2EKG7/22-245          -------DMIISILALAVWLGLSTIEPNYLYIPENDGDSNYPM-KKSQIPFLLLSFIVFGGFNLIFIGLYFLARRYPKYFCRFDLFPVAWGLVFAISMSNIFVNVPKSYVGRARPDIYARCGVK-----NLTECP----QKILKEEHKSWPSGHSSTAMSATIYMAAFFIKFLYAKP-YAIIFSALFALFGIYVGATRIVDFRHHPDDVLAGLFIGFIAAYIVWENLS--TKIFIESNQKDETL-------------------
A2ES10/16-247          N------MIIAGMMCSIYEILFYFVNSDPLYVPPEDSNSQFPY-RSSTVAFDKLMLYQFFIYFFSIIAAYLLQRFFPRFFRKFRPFTLAWNIVTIEFSTGIIISIFKNYVGRARPNVFDSCNSTNVN-GGKSNCPKAKTDEYYYESFRSWPSVHSQMGVSGMTVLGLFIQRLIKTKNMFGILISSAPILYGFYVGATIIRDFKHHPDDVLAGFVVGFVWALIGWDIMN--DSIFKKSNNDQY---------------------
A2DI86/2-201           -------------------------------------------------------LYQFLIYFFTIVVAYLLQRFFPKFFRKFRPFTLAWDIVIIEFWSAIIVSIFKNYTGRARPNVFAVCNSTNVN--GRNNCSKVKSDSYYYDLFQSWPSGHAQMGVSGMTVLGLFIQRFIKTKIMFGILLGSAPILYGFYVGASRIRDFKHHPDDVLAGFVVGFIWALIGWDVMR--GCIFEEETEPENAQ---ENSQPENLYNEDKEE-
A2D810/9-248           ---LDLPHLILAIVLFALVGVSMLQPPHPMAIPENDSQSNYPGNGKDTIKVFVLVGILAASGIVVLVLMKILSRFFSKVFKPFHFWSALWNFAIALASCTLAVNVIKNVVGRPRPDIYNVCGKS-VG-KDISTCSKNITKSQFYDEYRSWPSGHSSSAMAGYAFIALFLKKEIYGSTSIAFFIAFCVLVIPLYIGATRIVDYRHHADDVLAGFFVGFLISYFVFSTAK--NDMFEVELSEVSA----DNSD------------
A2DYB5/20-264          ---------VIAIISCLLWGGLWVLKPTPLYVPPNDSGSSFPKDEKNILPTAIMGGVLAAVFVVVFIAAWLLSKFFPKYFADFNGWTFLWAFVAAEGISGFTVSIFKNYVGRTRPDLYSICGSQEINPSDPSTCP-GLSASEFKDQFRSWPSGHSQTAMSGFVIIAFFVQRIIKSKNLVGTFCGSLFIILAIWCGATRIRDYKHRPDDVLAGFFVGYIFAQLVWLQMI--GNVFPEEDLG------QDNKDDKSLPDNENHQY
A2EPP6/19-259          ---------VIAIVSCVLWGVLFILKPTPLVVPENDSGSSFPRDEKNALPTALMGAVLAAVFFIVFISALLSKRYFPKYITNFNGWTFIWAFIAAEGISGLCVSLFKNYVGRSRPDLFAICGKN-VDINNPDSCP-NLTKREFYDQFRSWPSGHSQTAMSGFVIIALFVQKVINANNLISSFCGSLFIILAIWCGATRIRDYKHRPDDVLAGFFIGYIFAQFIWLQMV--NRIFPGEE--------PDIIEDKSVIDVDLQQ-
A2F6F1/11-261          -----IPHLILAVVTLLMALGTSFMKPDPLFIPNNDSNSQFPHLGKNTVPTWFAIVLVVVIGLVTFIGFYIFTLKFPDHIRKFNIFSAIFNFFAVLGISTTIVNILKNFVGRARPDMYSLCGNF-VG-EEYSSCTADVSRKVFDDNYRSWPSGHSAAALSGFMFLALFVQRVMKFSKSLGTFFAALYILLALYIGATRIRDFKHHPDDVLAGFFCGYIISRLVWEQCR--KSLFKNIDNKVEAEREPDNEDDQALNNQEP---
A2FWS2/17-258          -------HLILGVVSLVIFAGLEFAKPNPLYFPPNDSNSLFPHPGKSTIPTWLAIVLVAVIGIVTILVLFAISYKFPKICRKFNVYSALWNCAAVVGVSSILVDVLKNYVGRPRPDMIALCGEN-FT-GAYSTCKSGVSKSAFNDNYRSWPSGHSSSAMSGFIYLALLIQKSLIFSRTIGTFIAALYILFALYIGATRIRDFKHHTDDVLAGFFIGYIISRLIWDQCL--DYIYETNDKEHDIK--LDNEDKSTS--------
A2EZR4/7-240           IRKFCILDIITVIGLLVAGYCIEYAPLKSQNYPWAYSFIDQKT-KLGIFSYGYLCIFTYGIGSALIILLTLIFQ------SYSYILKNITSYLFSISFSCFVTSIIKKIVQRPMPDTEQIC-TV----ASVDVCSFYLTGHDLIAQFTSFPSRSACEAAASGIFLTNVLIDYWKSDSMFSALFKVIPIVWSLIVGAVEIVCRRAYPDDVLAGLLLGSLVAYFSYKNLKLQGILSPERKEESQSSII-----------------
A2F5R7/14-235          ---YNVLDWMLIIGINVAGFIALGIKFDKDFNEFLDIDIDQER-KTATIPYIIILVVEYGAVPILMLLIIIFVS------QTISIRKTLTAYYFAIGLNLLISNSLARFIGRPRPDTIAICGGD----GSFQRCYNVLSATELRTQFTSFPSVHTSEAMTSLLFLSFFFSDLWSQFHMGILVLRLFPVCLAFLVGATRIWDRNSHVDDVLAGLFIGGVLCTTVYTVYR---KGQRAKYN------------------------
A2F9V4/44-238          ----------------------------------INSDINNPK-RTTTVSYPQLCIFLYGIGALITLFIWILHR------RDYTISAILSSYYFSIAFTIFIGSILKHLVGRPRPDTMQVCGGD----GSYLQCSTVLSGASLYDQFFSFPSGHASESMAAAIFIAHLITEIWPSGSMFAAMLKLAPIVWSLFVGASRIWDRAHHVDDVLAGFLLGGIIGFFTFRTFKI-GVAVEQKKGGA----------------------
A2DNA2/14-246          ----GIVDWLVSIIVLVAALIIRFIPFNSDFTPMISSDISNQL-STSTLSYAQTYIITFGIGLAIVACIWLIAF------YDVNVFKVTASYVFGISASMLACAAVAKIIRRPRPDTIALCGGD----GSFLACSAYLSKSQLTYQFSSFPSSESAEAMASAIFLCLYLGLFMGYANNFSTLLMLLPLVFGIFVSAACIWDRRNHIDDAIAGMVIGLIFGYISFQPVK---KVVKQKKFERRPQALTETSS------------
A2EQG2/13-244          ---YAIIDWIVNILLLVPAYILKYTTFGENFTPFITSDIDNPI-STNSLTYGILCIVIFGVGSLIVILLWLLIY------YDVNVIKATASYIFSIASAMLVCAAIGKIVGRPRPDTIAICGGD----GSYLTCTGFLDQKQLASQFSSFPATEAAEAMAAAIFLCLYIGELIPYYNNVTSLLMASPIFFAIFVVAACIWDRRNHIDDAVCAMIIGAVMGLISFHTFK---KVIKQKKIELRPAAVTET--------------
#=GC scorecons         00000102142252223212221222322232513453433520333444322424434343244453435533122212335433334344434443534444545547795787444496330100343339412443325344649598465436655345645553434333333445433446445545795593745574797788555936343435333400224433332311100002111000000000000
#=GC scorecons_70      _____________________________________________________________________________________________________________***_***____*____________*____________*_*_**_*___**___________________________________**__*_*___*_******___*_______________________________________________
#=GC scorecons_80      ______________________________________________________________________________________________________________**__**____*____________*______________*_**__________________________________________**__*_*___*_***_**___*_______________________________________________
#=GC scorecons_90      _______________________________________________________________________________________________________________*________*____________*______________*_**___________________________________________*__*________*___*___*_______________________________________________
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