# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000661
#=GF DE Apoptotic protease-activating factor
#=GF AC 1.10.10.10/FF/000661
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.948
#=GS D6W8K8/363-437      AC D6W8K8
#=GS D6W8K8/363-437      OS Tribolium castaneum
#=GS D6W8K8/363-437      DE Uncharacterized protein
#=GS D6W8K8/363-437      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS E9H1Q9/377-459      AC E9H1Q9
#=GS E9H1Q9/377-459      OS Daphnia pulex
#=GS E9H1Q9/377-459      DE Uncharacterized protein
#=GS E9H1Q9/377-459      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS W4ZC90/514-594      AC W4ZC90
#=GS W4ZC90/514-594      OS Strongylocentrotus purpuratus
#=GS W4ZC90/514-594      DE Uncharacterized protein
#=GS W4ZC90/514-594      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4Z6L0/325-407      AC W4Z6L0
#=GS W4Z6L0/325-407      OS Strongylocentrotus purpuratus
#=GS W4Z6L0/325-407      DE Uncharacterized protein
#=GS W4Z6L0/325-407      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4XPV4/380-459      AC W4XPV4
#=GS W4XPV4/380-459      OS Strongylocentrotus purpuratus
#=GS W4XPV4/380-459      DE Uncharacterized protein
#=GS W4XPV4/380-459      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4XIQ6/368-444      AC W4XIQ6
#=GS W4XIQ6/368-444      OS Strongylocentrotus purpuratus
#=GS W4XIQ6/368-444      DE Uncharacterized protein
#=GS W4XIQ6/368-444      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS C3YZV6/370-450      AC C3YZV6
#=GS C3YZV6/370-450      OS Branchiostoma floridae
#=GS C3YZV6/370-450      DE Uncharacterized protein
#=GS C3YZV6/370-450      DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS B7PB18/369-443      AC B7PB18
#=GS B7PB18/369-443      OS Ixodes scapularis
#=GS B7PB18/369-443      DE Apoptotic protease-activating factor, putative
#=GS B7PB18/369-443      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A162RRZ9/377-458  AC A0A162RRZ9
#=GS A0A162RRZ9/377-458  OS Daphnia magna
#=GS A0A162RRZ9/377-458  DE Apoptotic Protease-activating factor 1
#=GS A0A162RRZ9/377-458  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P6DLU9/423-504  AC A0A0P6DLU9
#=GS A0A0P6DLU9/423-504  OS Daphnia magna
#=GS A0A0P6DLU9/423-504  DE Apoptotic protease-activating factor
#=GS A0A0P6DLU9/423-504  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P5MI22/439-520  AC A0A0P5MI22
#=GS A0A0P5MI22/439-520  OS Daphnia magna
#=GS A0A0P5MI22/439-520  DE Apoptotic protease-activating factor
#=GS A0A0P5MI22/439-520  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P6DJA6/453-534  AC A0A0P6DJA6
#=GS A0A0P6DJA6/453-534  OS Daphnia magna
#=GS A0A0P6DJA6/453-534  DE Apoptotic protease-activating factor
#=GS A0A0P6DJA6/453-534  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P5DGK5/377-458  AC A0A0P5DGK5
#=GS A0A0P5DGK5/377-458  OS Daphnia magna
#=GS A0A0P5DGK5/377-458  DE Apoptotic protease-activating factor
#=GS A0A0P5DGK5/377-458  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0N8CN60/377-458  AC A0A0N8CN60
#=GS A0A0N8CN60/377-458  OS Daphnia magna
#=GS A0A0N8CN60/377-458  DE Putative Apoptotic protease-activating factor
#=GS A0A0N8CN60/377-458  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P6EFW5/416-501  AC A0A0P6EFW5
#=GS A0A0P6EFW5/416-501  OS Daphnia magna
#=GS A0A0P6EFW5/416-501  DE Apoptotic protease-activating factor
#=GS A0A0P6EFW5/416-501  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS A0A0P6HCM2/439-520  AC A0A0P6HCM2
#=GS A0A0P6HCM2/439-520  OS Daphnia magna
#=GS A0A0P6HCM2/439-520  DE Apoptotic protease-activating factor
#=GS A0A0P6HCM2/439-520  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GF SQ 16
D6W8K8/363-437              ----------P--EVQRCFHSLAVFPKHVNIRPEILMKLWDKTYYEVRQIMVELENKSLIVSFYNKDLKS--YIYSIHSLVRTYLVEKA
E9H1Q9/377-459              ----SFDHLDE--DTRHSLKDFVIFLDDVNIPAPVLQVLWKCSRYEMEERISLLVANSLVAQHFQEHSSNCIVLYGIHDLLLDYLKSHM
W4ZC90/514-594              ----SLEQLPQ--ELRDIYKSFAIFAEDVPIPASVLGVMHGEEQESIEDMMEEIINKSLAFQEWNTTYKC--QMYTIHDLQLDFLTEQY
W4Z6L0/325-407              ----SVEELPSRDEVMRLFSWFAVFDQGTRLSSKILSMLEGCSTEEIEDRMKILTQRHLAISGCHSDDKD--QIFWLHDLVYDYLVSEK
W4XPV4/380-459              ----SVEQLTT--SQIEVYSWFAVFEEGIKLSSQVLAMLVECSKEEVEDRMRGITRRSLVSTEWSTYDEC--RVYWIHDLLHDHLVAR-
W4XIQ6/368-444              ----SVEQLTT--SQIEVYSWFAVFEEGIKLSSQVLAMLVECSKEEVEDRMRGITRRSLVSTEWSTYDEC--RVYWIHDLLHDHL----
C3YZV6/370-450              ----SVDHLDT--EIRDLYQQFAVFDNDTLVPTQVLSILWAEEIEFVEDTMDELCKKSLAFQSWDEKQKT--FVYTVHDLQLDYLKEQC
B7PB18/369-443              ----------G--DTEGYFRDFALFMDDVDIPSVVFEVLWNMSKEEVDEVMCHLQSQCLVRVEEDPVEGS--RTYGIHDLYLSFLRKKC
A0A162RRZ9/377-458          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P6DLU9/423-504          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P5MI22/439-520          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P6DJA6/453-534          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P5DGK5/377-458          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0N8CN60/377-458          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P6EFW5/416-501          AIAISFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
A0A0P6HCM2/439-520          ----SFDHLDQ--ETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEERISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSH-
#=GC scorecons              00005344534006444354386693556465537835844464466764633734579634444433441135847979456793340
#=GC scorecons_70           _____________*_______*_**___*_*___**__*______*_**_*__*___**_______________*_****__***____
#=GC scorecons_80           _____________________*__*_________**__*________*__________*_______________*_****____*____
#=GC scorecons_90           ________________________*__________*__*___________________*_______________*__*_*____*____
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