# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/001201
#=GF DE RNA polymerase sigma factor sigD, chloroplastic
#=GF AC 1.10.10.10/FF/001201
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 13.272
#=GS Q9ZSL6/333-412      AC Q9ZSL6
#=GS Q9ZSL6/333-412      OS Arabidopsis thaliana
#=GS Q9ZSL6/333-412      DE RNA polymerase sigma factor sigD, chloroplastic
#=GS Q9ZSL6/333-412      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9ZSL6/333-412      DR GO; GO:0006352; GO:0009507; GO:0016987; GO:0071482; GO:2001141; 
#=GS M4CX60/320-399      AC M4CX60
#=GS M4CX60/320-399      OS Brassica rapa subsp. pekinensis
#=GS M4CX60/320-399      DE Uncharacterized protein
#=GS M4CX60/320-399      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A1J3JPU7/356-434  AC A0A1J3JPU7
#=GS A0A1J3JPU7/356-434  OS Noccaea caerulescens
#=GS A0A1J3JPU7/356-434  DE RNA polymerase sigma factor sigD, chloroplastic
#=GS A0A1J3JPU7/356-434  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0FET2/333-412      AC R0FET2
#=GS R0FET2/333-412      OS Capsella rubella
#=GS R0FET2/333-412      DE Uncharacterized protein
#=GS R0FET2/333-412      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS A0A0D3EFQ2/182-261  AC A0A0D3EFQ2
#=GS A0A0D3EFQ2/182-261  OS Brassica oleracea var. oleracea
#=GS A0A0D3EFQ2/182-261  DE Uncharacterized protein
#=GS A0A0D3EFQ2/182-261  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GF SQ 5
Q9ZSL6/333-412              TRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLK
M4CX60/320-399              TRPEEMVKREHMKEGIKQLLGTLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALAKLRNVHNVNDLR
A0A1J3JPU7/356-434          TRPEEMVKREHMKHEIEQLLGTLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALTKLRNVHYVNDL-
R0FET2/333-412              TRPEEMVKREHIKNEIEQLLGSLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLK
A0A0D3EFQ2/182-261          TRPEEMVKREHMKEGIKQLLGTLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALAKLRNLHNVNDLR
#=GC scorecons              99999999999794595999959999999999999999999999999999999999999999999994999979699993
#=GC scorecons_70           *************__*_****_*********************************************_******_****_
#=GC scorecons_80           *************__*_****_*********************************************_****_*_****_
#=GC scorecons_90           ***********_*__*_****_*********************************************_****_*_****_
//