# STOCKHOLM 1.0
#=GF ID 3.30.160.60/FF/1086
#=GF DE 26S proteasome regulatory subunit RPN4
#=GF AC 3.30.160.60/FF/1086
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 1.789
#=GS Q03465/401-469      AC Q03465
#=GS Q03465/401-469      OS Saccharomyces cerevisiae S288C
#=GS Q03465/401-469      DE Protein RPN4
#=GS Q03465/401-469      DR GENE3D; 7c748e3b5a0b98b7ec98e61a64916032/401-469; 
#=GS Q03465/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q03465/401-469      DR GO; GO:0000122; GO:0000978; GO:0001077; GO:0005515; GO:0005634; GO:0006282; GO:0032436; GO:0036003; GO:0045944; GO:0061395; 
#=GS H0GDV7/401-469      AC H0GDV7
#=GS H0GDV7/401-469      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GDV7/401-469      DE Rpn4p
#=GS H0GDV7/401-469      DR GENE3D; bb29afcbb99dc3eca156c4c27629c380/401-469; 
#=GS H0GDV7/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS E7KL46/401-469      AC E7KL46
#=GS E7KL46/401-469      OS Saccharomyces cerevisiae Lalvin QA23
#=GS E7KL46/401-469      DE Rpn4p
#=GS E7KL46/401-469      DR GENE3D; bb29afcbb99dc3eca156c4c27629c380/401-469; 
#=GS E7KL46/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z4P9/401-469      AC C8Z4P9
#=GS C8Z4P9/401-469      OS Saccharomyces cerevisiae EC1118
#=GS C8Z4P9/401-469      DE Rpn4p
#=GS C8Z4P9/401-469      DR GENE3D; bb29afcbb99dc3eca156c4c27629c380/401-469; 
#=GS C8Z4P9/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VSM6/401-469  AC A0A0L8VSM6
#=GS A0A0L8VSM6/401-469  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VSM6/401-469  DE RPN4p Transcription factor
#=GS A0A0L8VSM6/401-469  DR GENE3D; 3640c85307d441fde2d5735825ca2f96/401-469; 
#=GS A0A0L8VSM6/401-469  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS E7KAM8/401-469      AC E7KAM8
#=GS E7KAM8/401-469      OS Saccharomyces cerevisiae AWRI796
#=GS E7KAM8/401-469      DE Rpn4p
#=GS E7KAM8/401-469      DR GENE3D; 3640c85307d441fde2d5735825ca2f96/401-469; 
#=GS E7KAM8/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7QCM3/401-469      AC E7QCM3
#=GS E7QCM3/401-469      OS Saccharomyces cerevisiae VL3
#=GS E7QCM3/401-469      DE Rpn4p
#=GS E7QCM3/401-469      DR GENE3D; 3640c85307d441fde2d5735825ca2f96/401-469; 
#=GS E7QCM3/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZXU9/401-469      AC A6ZXU9
#=GS A6ZXU9/401-469      OS Saccharomyces cerevisiae YJM789
#=GS A6ZXU9/401-469      DE Regulatory particle non-ATPase
#=GS A6ZXU9/401-469      DR GENE3D; f87f6e870eb3fc1da1bf525a6eb47146/401-469; 
#=GS A6ZXU9/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7NGL5/401-469      AC E7NGL5
#=GS E7NGL5/401-469      OS Saccharomyces cerevisiae FostersO
#=GS E7NGL5/401-469      DE Rpn4p
#=GS E7NGL5/401-469      DR GENE3D; f87f6e870eb3fc1da1bf525a6eb47146/401-469; 
#=GS E7NGL5/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P5X6/401-469      AC N1P5X6
#=GS N1P5X6/401-469      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P5X6/401-469      DE Rpn4p
#=GS N1P5X6/401-469      DR GENE3D; 7c748e3b5a0b98b7ec98e61a64916032/401-469; 
#=GS N1P5X6/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LGS5/282-350      AC B3LGS5
#=GS B3LGS5/282-350      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LGS5/282-350      DE 26S proteasome regulatory subunit RPN4
#=GS B3LGS5/282-350      DR GENE3D; 74e8186f62b636a88aa8d923e861ab1b/282-350; 
#=GS B3LGS5/282-350      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WCD5/401-469      AC G2WCD5
#=GS G2WCD5/401-469      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WCD5/401-469      DE K7_Rpn4p
#=GS G2WCD5/401-469      DR GENE3D; c5db822867e7ae81d1f4e8dcdd53913e/401-469; 
#=GS G2WCD5/401-469      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF TC 170.9 1.7E-54
#=GF SQ 12
Q03465/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHTSSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
H0GDV7/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
E7KL46/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
C8Z4P9/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
A0A0L8VSM6/401-469          YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
E7KAM8/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
E7QCM3/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
A6ZXU9/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
E7NGL5/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
N1P5X6/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHTSSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
B3LGS5/282-350              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
G2WCD5/401-469              YTKKHLSSHSSTNSNSKPSTASPSAHASSSDGNNEIFTCQIMNLITNEPCGAQFSRSYDLTRHQNTIHA
#=GC scorecons              999999999999999999999999996999999999999999999999999999999999999999999
#=GC scorecons_70           **************************_******************************************
#=GC scorecons_80           **************************_******************************************
#=GC scorecons_90           **************************_******************************************
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