PDB 6id1
PDB Information
| PDB | 6ID1 |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Structures of the human spliceosomes before and after release of the ligated exon.
Cell Res.
|
| Header | Splicing |
| Released | 2018-09-07 |
| Resolution | 2.860 |
| CATH Insert Date | 17 Mar, 2019 |
PDB Images (64)
6id1
PDB 6id1
6id1a
PDB Chain 6id1a
6id1A
PDB Chain 6id1A
6id1b
PDB Chain 6id1b
6id1B
PDB Chain 6id1B
6id1c
PDB Chain 6id1c
6id1C
PDB Chain 6id1C
6id1d
PDB Chain 6id1d
6id1e
PDB Chain 6id1e
6id1E
PDB Chain 6id1E
6id1f
PDB Chain 6id1f
6id1F
PDB Chain 6id1F
6id1g
PDB Chain 6id1g
6id1G
PDB Chain 6id1G
6id1h
PDB Chain 6id1h
6id1H
PDB Chain 6id1H
6id1i
PDB Chain 6id1i
6id1I
PDB Chain 6id1I
6id1j
PDB Chain 6id1j
6id1J
PDB Chain 6id1J
6id1k
PDB Chain 6id1k
6id1K
PDB Chain 6id1K
6id1l
PDB Chain 6id1l
6id1L
PDB Chain 6id1L
6id1m
PDB Chain 6id1m
6id1M
PDB Chain 6id1M
6id1n
PDB Chain 6id1n
6id1N
PDB Chain 6id1N
6id1o
PDB Chain 6id1o
6id1O
PDB Chain 6id1O
6id1p
PDB Chain 6id1p
6id1P
PDB Chain 6id1P
6id1q
PDB Chain 6id1q
6id1Q
PDB Chain 6id1Q
6id1r
PDB Chain 6id1r
6id1R
PDB Chain 6id1R
6id1s
PDB Chain 6id1s
6id1S
PDB Chain 6id1S
6id1t
PDB Chain 6id1t
6id1T
PDB Chain 6id1T
6id1U
PDB Chain 6id1U
6id1V
PDB Chain 6id1V
6id1W
PDB Chain 6id1W
6id1y
PDB Chain 6id1y
6id1a00
CATH Domain 6id1a00
6id1b00
CATH Domain 6id1b00
6id1c00
CATH Domain 6id1c00
6id1d00
CATH Domain 6id1d00
6id1e00
CATH Domain 6id1e00
6id1E00
CATH Domain 6id1E00
6id1f00
CATH Domain 6id1f00
6id1g00
CATH Domain 6id1g00
6id1h00
CATH Domain 6id1h00
6id1i00
CATH Domain 6id1i00
6id1j00
CATH Domain 6id1j00
6id1k00
CATH Domain 6id1k00
6id1K00
CATH Domain 6id1K00
6id1l00
CATH Domain 6id1l00
6id1m00
CATH Domain 6id1m00
6id1n00
CATH Domain 6id1n00
6id1o00
CATH Domain 6id1o00
6id1p00
CATH Domain 6id1p00
6id1S00
CATH Domain 6id1S00
6id1y00
CATH Domain 6id1y00
PDB Prints
PDB Chains (43)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| a | 17 Mar, 2019 | Chopped |
| A | 17 Mar, 2019 | Holding pen |
| b | 17 Mar, 2019 | Chopped |
| B | 17 Mar, 2019 | Rejected |
| c | 17 Mar, 2019 | Chopped |
| C | 17 Mar, 2019 | Holding pen |
| d | 17 Mar, 2019 | Chopped |
| e | 17 Mar, 2019 | Chopped |
| E | 17 Mar, 2019 | Chopped |
| f | 17 Mar, 2019 | Chopped |
| F | 17 Mar, 2019 | Rejected |
| g | 17 Mar, 2019 | Chopped |
| G | 17 Mar, 2019 | Rejected |
| h | 17 Mar, 2019 | Chopped |
| H | 17 Mar, 2019 | Rejected |
| i | 17 Mar, 2019 | Chopped |
| I | 17 Mar, 2019 | Write scan list |
| j | 17 Mar, 2019 | Chopped |
| J | 17 Mar, 2019 | Holding pen |
| k | 17 Mar, 2019 | Chopped |
| K | 17 Mar, 2019 | Chopped |
| l | 17 Mar, 2019 | Chopped |
| L | 17 Mar, 2019 | Holding pen |
| m | 17 Mar, 2019 | Chopped |
| M | 17 Mar, 2019 | Write scan list |
| n | 17 Mar, 2019 | Chopped |
| N | 17 Mar, 2019 | Holding pen |
| o | 17 Mar, 2019 | Chopped |
| O | 17 Mar, 2019 | Holding pen |
| p | 17 Mar, 2019 | Chopped |
| P | 17 Mar, 2019 | Holding pen |
| q | 17 Mar, 2019 | Holding pen |
| Q | 17 Mar, 2019 | Holding pen |
| r | 17 Mar, 2019 | Holding pen |
| R | 17 Mar, 2019 | Holding pen |
| s | 17 Mar, 2019 | Holding pen |
| S | 17 Mar, 2019 | Chopped |
| t | 17 Mar, 2019 | Write scan list |
| T | 17 Mar, 2019 | Holding pen |
| U | 17 Mar, 2019 | Write scan list |
| V | 17 Mar, 2019 | Holding pen |
| W | 17 Mar, 2019 | Holding pen |
| y | 17 Mar, 2019 | Chopped |
CATH Domains (20)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 6id1a00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1b00 | 18 Mar, 2019 | Holding pen | |
| 6id1c00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1d00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1e00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1E00 | 18 Mar, 2019 | 2.130.10.10 | Assigned |
| 6id1f00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1g00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1h00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1i00 | 18 Mar, 2019 | Holding pen | |
| 6id1j00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1k00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1K00 | 18 Mar, 2019 | Holding pen | |
| 6id1l00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1m00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1n00 | 18 Mar, 2019 | 2.30.30.100 | Assigned |
| 6id1o00 | 18 Mar, 2019 | 3.80.10.10 | Assigned |
| 6id1p00 | 18 Mar, 2019 | 3.30.70.330 | Assigned |
| 6id1S00 | 18 Mar, 2019 | 2.40.100.10 | Assigned |
| 6id1y00 | 18 Mar, 2019 | 3.30.70.330 | Assigned |
UniProtKB Entries (34)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q2TBE0 | C19L2_HUMAN | Homo sapiens | CWF19-like protein 2 |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| Q9UNP9 | PPIE_HUMAN | Homo sapiens | Peptidyl-prolyl cis-trans isomerase E |
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| P09661 | RU2A_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein A' |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| Q9BZJ0 | CRNL1_HUMAN | Homo sapiens | Crooked neck-like protein 1 |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| O43660 | PLRG1_HUMAN | Homo sapiens | Pleiotropic regulator 1 |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
| Q96DI7 | SNR40_HUMAN | Homo sapiens | U5 small nuclear ribonucleoprotein 40 kDa protein |
| O60508 | PRP17_HUMAN | Homo sapiens | Pre-mRNA-processing factor 17 |
| Q6P2Q9 | PRP8_HUMAN | Homo sapiens | Pre-mRNA-processing-splicing factor 8 |
| P08579 | RU2B_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein B'' |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| O60306 | AQR_HUMAN | Homo sapiens | RNA helicase aquarius |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| Q15029 | U5S1_HUMAN | Homo sapiens | 116 kDa U5 small nuclear ribonucleoprotein component |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| Q99459 | CDC5L_HUMAN | Homo sapiens | Cell division cycle 5-like protein |
| Q9HCS7 | SYF1_HUMAN | Homo sapiens | Pre-mRNA-splicing factor SYF1 |
| Q9Y3C6 | PPIL1_HUMAN | Homo sapiens | Peptidyl-prolyl cis-trans isomerase-like 1 |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| O43143 | DHX15_HUMAN | Homo sapiens | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| Q9NW64 | RBM22_HUMAN | Homo sapiens | Pre-mRNA-splicing factor RBM22 |
