PDB Information

PDB6ICZ
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Structures of the human spliceosomes before and after release of the ligated exon.
Zhang, X., Zhan, X., Yan, C., Zhang, W., Liu, D., Lei, J., Shi, Y.
Cell Res.
HeaderSplicing
Released2018-09-07
Resolution3.000
CATH Insert Date17 Mar, 2019

PDB Images (74)

PDB Prints

PDB Chains (51)

Chain ID Date inserted into CATH CATH Status
a 17 Mar, 2019 Chopped
A 17 Mar, 2019 Holding pen
b 17 Mar, 2019 Chopped
B 17 Mar, 2019 Rejected
c 17 Mar, 2019 Chopped
C 17 Mar, 2019 Holding pen
d 17 Mar, 2019 Chopped
D 17 Mar, 2019 Holding pen
e 17 Mar, 2019 Chopped
E 17 Mar, 2019 Chopped
f 17 Mar, 2019 Chopped
F 17 Mar, 2019 Rejected
g 17 Mar, 2019 Chopped
G 17 Mar, 2019 Rejected
h 17 Mar, 2019 Chopped
H 17 Mar, 2019 Rejected
i 17 Mar, 2019 Chopped
I 17 Mar, 2019 Holding pen
j 17 Mar, 2019 Chopped
J 17 Mar, 2019 Holding pen
k 17 Mar, 2019 Chopped
K 17 Mar, 2019 Chopped
l 17 Mar, 2019 Chopped
L 17 Mar, 2019 Holding pen
m 17 Mar, 2019 Chopped
M 17 Mar, 2019 Holding pen
n 17 Mar, 2019 Chopped
N 17 Mar, 2019 Holding pen
o 17 Mar, 2019 Chopped
O 17 Mar, 2019 Holding pen
p 17 Mar, 2019 Chopped
P 17 Mar, 2019 Holding pen
q 17 Mar, 2019 Holding pen
Q 17 Mar, 2019 Holding pen
r 17 Mar, 2019 Holding pen
R 17 Mar, 2019 Holding pen
s 17 Mar, 2019 Holding pen
S 17 Mar, 2019 Chopped
t 17 Mar, 2019 Holding pen
T 17 Mar, 2019 Holding pen
u 17 Mar, 2019 Holding pen
U 17 Mar, 2019 Rejected
v 17 Mar, 2019 Chopped
V 17 Mar, 2019 Write scan list
w 17 Mar, 2019 Chopped
W 17 Mar, 2019 Holding pen
x 17 Mar, 2019 Rejected
X 17 Mar, 2019 Write scan list
y 17 Mar, 2019 Chopped
Y 17 Mar, 2019 Holding pen
Z 17 Mar, 2019 Write scan list

CATH Domains (22)

Domain ID Date inserted into CATH Superfamily CATH Status
6icza00 18 Mar, 2019 2.30.30.100 Assigned
6iczb00 18 Mar, 2019 Holding pen
6iczc00 18 Mar, 2019 2.30.30.100 Assigned
6iczd00 18 Mar, 2019 2.30.30.100 Assigned
6icze00 18 Mar, 2019 2.30.30.100 Assigned
6iczE00 18 Mar, 2019 2.130.10.10 Assigned
6iczf00 18 Mar, 2019 2.30.30.100 Assigned
6iczg00 18 Mar, 2019 2.30.30.100 Assigned
6iczh00 18 Mar, 2019 2.30.30.100 Assigned
6iczi00 18 Mar, 2019 Holding pen
6iczj00 18 Mar, 2019 2.30.30.100 Assigned
6iczk00 18 Mar, 2019 2.30.30.100 Assigned
6iczK00 18 Mar, 2019 Holding pen
6iczl00 18 Mar, 2019 2.30.30.100 Assigned
6iczm00 18 Mar, 2019 2.30.30.100 Assigned
6iczn00 18 Mar, 2019 2.30.30.100 Assigned
6iczo00 18 Mar, 2019 3.80.10.10 Assigned
6iczp00 18 Mar, 2019 3.30.70.330 Assigned
6iczS00 18 Mar, 2019 2.40.100.10 Assigned
6iczv00 18 Mar, 2019 3.30.1560.10 Assigned
6iczw00 18 Mar, 2019 3.30.70.330 Assigned
6iczy00 18 Mar, 2019 3.30.70.330 Assigned

UniProtKB Entries (38)

Accession Gene ID Taxon Description
Q9Y5S9 RBM8A_HUMAN Homo sapiens RNA-binding protein 8A
P08579 RU2B_HUMAN Homo sapiens U2 small nuclear ribonucleoprotein B''
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
Q9Y3C6 PPIL1_HUMAN Homo sapiens Peptidyl-prolyl cis-trans isomerase-like 1
O43660 PLRG1_HUMAN Homo sapiens Pleiotropic regulator 1
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G
Q99459 CDC5L_HUMAN Homo sapiens Cell division cycle 5-like protein
O60508 PRP17_HUMAN Homo sapiens Pre-mRNA-processing factor 17
Q96A72 MGN2_HUMAN Homo sapiens Protein mago nashi homolog 2
P09661 RU2A_HUMAN Homo sapiens U2 small nuclear ribonucleoprotein A'
Q96DI7 SNR40_HUMAN Homo sapiens U5 small nuclear ribonucleoprotein 40 kDa protein
Q14562 DHX8_HUMAN Homo sapiens ATP-dependent RNA helicase DHX8
Q9HCG8 CWC22_HUMAN Homo sapiens Pre-mRNA-splicing factor CWC22 homolog
Q9HCS7 SYF1_HUMAN Homo sapiens Pre-mRNA-splicing factor SYF1
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G
Q9UMS4 PRP19_HUMAN Homo sapiens Pre-mRNA-processing factor 19
Q9UMS4 PRP19_HUMAN Homo sapiens Pre-mRNA-processing factor 19
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
Q9UNP9 PPIE_HUMAN Homo sapiens Peptidyl-prolyl cis-trans isomerase E
Q9UMS4 PRP19_HUMAN Homo sapiens Pre-mRNA-processing factor 19
Q9NW64 RBM22_HUMAN Homo sapiens Pre-mRNA-splicing factor RBM22
P38919 IF4A3_HUMAN Homo sapiens Eukaryotic initiation factor 4A-III
Q9UMS4 PRP19_HUMAN Homo sapiens Pre-mRNA-processing factor 19
O60306 AQR_HUMAN Homo sapiens RNA helicase aquarius
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
Q6P2Q9 PRP8_HUMAN Homo sapiens Pre-mRNA-processing-splicing factor 8
Q9BZJ0 CRNL1_HUMAN Homo sapiens Crooked neck-like protein 1
O75643 U520_HUMAN Homo sapiens U5 small nuclear ribonucleoprotein 200 kDa helicase
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
Q15029 U5S1_HUMAN Homo sapiens 116 kDa U5 small nuclear ribonucleoprotein component