PDB 6gym
PDB Information
| PDB | 6GYM |
| Method | ELECTRON MICROSCOPY |
| Host Organism | Trichoplusia ni |
| Gene Source | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Primary Citation | Promoter Distortion and Opening in the RNA Polymerase II Cleft.
Mol. Cell
|
| Header | Transcription |
| Released | 2018-06-30 |
| Resolution | 6.700 |
| CATH Insert Date | 16 Dec, 2018 |
PDB Images (32)
6gym
PDB 6gym
6gym0
PDB Chain 6gym0
6gym1
PDB Chain 6gym1
6gym2
PDB Chain 6gym2
6gym3
PDB Chain 6gym3
6gym4
PDB Chain 6gym4
6gym5
PDB Chain 6gym5
6gym6
PDB Chain 6gym6
6gym7
PDB Chain 6gym7
6gymA
PDB Chain 6gymA
6gymB
PDB Chain 6gymB
6gymC
PDB Chain 6gymC
6gymD
PDB Chain 6gymD
6gymE
PDB Chain 6gymE
6gymF
PDB Chain 6gymF
6gymG
PDB Chain 6gymG
6gymH
PDB Chain 6gymH
6gymI
PDB Chain 6gymI
6gymJ
PDB Chain 6gymJ
6gymK
PDB Chain 6gymK
6gymL
PDB Chain 6gymL
6gymM
PDB Chain 6gymM
6gymN
PDB Chain 6gymN
6gymO
PDB Chain 6gymO
6gymQ
PDB Chain 6gymQ
6gymR
PDB Chain 6gymR
6gymT
PDB Chain 6gymT
6gymU
PDB Chain 6gymU
6gymV
PDB Chain 6gymV
6gymW
PDB Chain 6gymW
6gymX
PDB Chain 6gymX
6gymZ
PDB Chain 6gymZ
PDB Prints
PDB Chains (31)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 0 | 16 Dec, 2018 | Rejected |
| 1 | 16 Dec, 2018 | Rejected |
| 2 | 16 Dec, 2018 | Rejected |
| 3 | 16 Dec, 2018 | Rejected |
| 4 | 16 Dec, 2018 | Rejected |
| 5 | 16 Dec, 2018 | Rejected |
| 6 | 16 Dec, 2018 | Rejected |
| 7 | 16 Dec, 2018 | Rejected |
| A | 16 Dec, 2018 | Rejected |
| B | 16 Dec, 2018 | Rejected |
| C | 16 Dec, 2018 | Rejected |
| D | 16 Dec, 2018 | Rejected |
| E | 16 Dec, 2018 | Rejected |
| F | 16 Dec, 2018 | Rejected |
| G | 16 Dec, 2018 | Rejected |
| H | 16 Dec, 2018 | Rejected |
| I | 16 Dec, 2018 | Rejected |
| J | 16 Dec, 2018 | Rejected |
| K | 16 Dec, 2018 | Rejected |
| L | 16 Dec, 2018 | Rejected |
| M | 16 Dec, 2018 | Rejected |
| N | 16 Dec, 2018 | Rejected |
| O | 16 Dec, 2018 | Rejected |
| Q | 16 Dec, 2018 | Rejected |
| R | 16 Dec, 2018 | Rejected |
| T | 16 Dec, 2018 | Rejected |
| U | 16 Dec, 2018 | Rejected |
| V | 16 Dec, 2018 | Rejected |
| W | 16 Dec, 2018 | Rejected |
| X | 16 Dec, 2018 | Rejected |
| Z | 16 Dec, 2018 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (26)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P04050 | RPB1_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB1 |
| Q04673 | SSL1_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH subunit SSL1 |
| P06839 | RAD3_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH helicase subunit XPD |
| P22139 | RPAB5_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC5 |
| P32773 | TOA1_YEAST | Saccharomyces cerevisiae S288C | Transcription initiation factor IIA large subunit |
| P34087 | RPB7_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB7 |
| P32774 | T2AG_YEAST | Saccharomyces cerevisiae S288C | Transcription initiation factor IIA subunit 2 |
| Q3E7C1 | TFB5_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH subunit TFB5 |
| Q00578 | RAD25_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH helicase subunit XPB |
| P08518 | RPB2_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB2 |
| Q02939 | TFB2_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH subunit TFB2 |
| P13393 | TBP_YEAST | Saccharomyces cerevisiae S288C | TATA-box-binding protein |
| P20434 | RPAB1_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC1 |
| Q12004 | TFB4_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH subunit TFB4 |
| P20435 | RPAB2_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC2 |
| P41896 | T2FB_YEAST | Saccharomyces cerevisiae S288C | Transcription initiation factor IIF subunit beta |
| P36100 | T2EA_YEAST | Saccharomyces cerevisiae S288C | Transcription initiation factor IIE subunit alpha |
| Q03290 | TFB3_YEAST | Saccharomyces cerevisiae S288C | RNA polymerase II transcription factor B subunit 3 |
| P32776 | TFB1_YEAST | Saccharomyces cerevisiae S288C | General transcription and DNA repair factor IIH subunit TFB1 |
| P40422 | RPAB4_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC4 |
| P38902 | RPB11_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB11 |
| P27999 | RPB9_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB9 |
| P16370 | RPB3_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB3 |
| P29055 | TF2B_YEAST | Saccharomyces cerevisiae S288C | Transcription initiation factor IIB |
| P20436 | RPAB3_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
| P20433 | RPB4_YEAST | Saccharomyces cerevisiae S288C | DNA-directed RNA polymerase II subunit RPB4 |