PDB 6em5
PDB Information
| PDB | 6EM5 |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell
|
| Header | Ribosome |
| Released | 2017-10-01 |
| Resolution | 4.300 |
| CATH Insert Date | 07 Jan, 2018 |
PDB Images (58)
6em5
PDB 6em5
6em51
PDB Chain 6em51
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PDB Chain 6em53
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PDB Chain 6em5Z
PDB Prints
PDB Chains (57)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 1 | 07 Jan, 2018 | Rejected |
| 2 | 07 Jan, 2018 | Rejected |
| 3 | 07 Jan, 2018 | Rejected |
| 4 | 07 Jan, 2018 | Rejected |
| 5 | 07 Jan, 2018 | Rejected |
| 6 | 07 Jan, 2018 | Rejected |
| A | 07 Jan, 2018 | Rejected |
| b | 07 Jan, 2018 | Rejected |
| B | 07 Jan, 2018 | Rejected |
| c | 07 Jan, 2018 | Rejected |
| C | 07 Jan, 2018 | Rejected |
| d | 07 Jan, 2018 | Rejected |
| D | 07 Jan, 2018 | Rejected |
| e | 07 Jan, 2018 | Rejected |
| E | 07 Jan, 2018 | Rejected |
| f | 07 Jan, 2018 | Rejected |
| F | 07 Jan, 2018 | Rejected |
| g | 07 Jan, 2018 | Rejected |
| G | 07 Jan, 2018 | Rejected |
| h | 07 Jan, 2018 | Rejected |
| H | 07 Jan, 2018 | Rejected |
| i | 07 Jan, 2018 | Rejected |
| I | 07 Jan, 2018 | Rejected |
| j | 07 Jan, 2018 | Rejected |
| J | 07 Jan, 2018 | Rejected |
| k | 07 Jan, 2018 | Rejected |
| K | 07 Jan, 2018 | Rejected |
| l | 07 Jan, 2018 | Rejected |
| L | 07 Jan, 2018 | Rejected |
| m | 07 Jan, 2018 | Rejected |
| M | 07 Jan, 2018 | Rejected |
| n | 07 Jan, 2018 | Rejected |
| N | 07 Jan, 2018 | Rejected |
| o | 07 Jan, 2018 | Rejected |
| O | 07 Jan, 2018 | Rejected |
| p | 07 Jan, 2018 | Rejected |
| P | 07 Jan, 2018 | Rejected |
| q | 07 Jan, 2018 | Rejected |
| Q | 07 Jan, 2018 | Rejected |
| r | 07 Jan, 2018 | Rejected |
| R | 07 Jan, 2018 | Rejected |
| s | 07 Jan, 2018 | Rejected |
| S | 07 Jan, 2018 | Rejected |
| t | 07 Jan, 2018 | Rejected |
| T | 07 Jan, 2018 | Rejected |
| u | 07 Jan, 2018 | Rejected |
| U | 07 Jan, 2018 | Rejected |
| v | 07 Jan, 2018 | Rejected |
| V | 07 Jan, 2018 | Rejected |
| w | 07 Jan, 2018 | Rejected |
| W | 07 Jan, 2018 | Rejected |
| x | 07 Jan, 2018 | Rejected |
| X | 07 Jan, 2018 | Rejected |
| y | 07 Jan, 2018 | Rejected |
| Y | 07 Jan, 2018 | Rejected |
| z | 07 Jan, 2018 | Rejected |
| Z | 07 Jan, 2018 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (46)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q08235 | BRX1_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein BRX1 |
| P14120 | RL30_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L30 |
| P0CX82 | RL19A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L19-A |
| P0CX23 | RL20A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L20-A |
| P40991 | NOP2_YEAST | Saccharomyces cerevisiae S288C | 25S rRNA (cytosine(2870)-C(5))-methyltransferase |
| P0C2H8 | RL31A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L31-A |
| P05743 | RL26A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L26-A |
| P38805 | RPF1_YEAST | Saccharomyces cerevisiae S288C | Ribosome production factor 1 |
| P05738 | RL9A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L9-A |
| P10664 | RL4A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L4-A |
| Q12024 | YTM1_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein YTM1 |
| Q02753 | RL21A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L21-A |
| Q02326 | RL6A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L6-A |
| Q12522 | IF6_YEAST | Saccharomyces cerevisiae S288C | Eukaryotic translation initiation factor 6 |
| P14126 | RL3_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L3 |
| P49166 | RL37A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L37-A |
| P25582 | SPB1_YEAST | Saccharomyces cerevisiae S288C | 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase |
| Q12690 | RL13A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L13-A |
| P33201 | MRT4_YEAST | Saccharomyces cerevisiae S288C | Ribosome assembly factor MRT4 |
| Q02892 | NOG1_YEAST | Saccharomyces cerevisiae S288C | Nucleolar GTP-binding protein 1 |
| P17076 | RL8A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L8-A |
| P10962 | MAK16_YEAST | Saccharomyces cerevisiae S288C | Protein MAK16 |
| P05748 | RL15A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L15-A |
| P0CX49 | RL18A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L18-A |
| Q07915 | RLP24_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein RLP24 |
| P87262 | RL34A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L34-A |
| P05744 | RL33A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L33-A |
| P05740 | RL17A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L17-A |
| P53261 | PESC_YEAST | Saccharomyces cerevisiae S288C | Pescadillo homolog |
| Q03532 | HAS1_YEAST | Saccharomyces cerevisiae S288C | ATP-dependent RNA helicase HAS1 |
| P40693 | RLP7_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein RLP7 |
| Q04660 | ERB1_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein ERB1 |
| P04456 | RL25_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L25 |
| P40010 | NUG1_YEAST | Saccharomyces cerevisiae S288C | Nuclear GTP-binding protein NUG1 |
| P0C2H6 | RL27A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L27-A |
| P40078 | NSA2_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein NSA2 |
| O14455 | RL36B_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L36-B |
| P05737 | RL7A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L7-A |
| P05749 | RL22A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L22-A |
| P0CX84 | RL35A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L35-A |
| P36105 | RL14A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L14-A |
| Q08962 | NIP7_YEAST | Saccharomyces cerevisiae S288C | 60S ribosome subunit biogenesis protein NIP7 |
| P53927 | NOP15_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein 15 |
| P26784 | RL16A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L16-A |
| P0CX41 | RL23A_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L23-A |
| P49167 | RL38_YEAST | Saccharomyces cerevisiae S288C | 60S ribosomal protein L38 |
