PDB 6cdi

PDB Information

PDB6CDI
MethodELECTRON MICROSCOPY
Host OrganismHomo sapiens
Gene SourceHuman immunodeficiency virus 1
Primary Citation
Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
Xu, K., Acharya, P., Kong, R., Cheng, C., Chuang, G.Y., Liu, K., Louder, M.K., O'Dell, S., Rawi, R., Sastry, M., Shen, C.H., Zhang, B., Zhou, T., Asokan, M., Bailer, R.T., Chambers, M., Chen, X., Choi, C.W., Dandey, V.P., Doria-Rose, N.A., Druz, A., Eng, E.T., Farney, S.K., Foulds, K.E., Geng, H., Georgiev, I.S., Gorman, J., Hill, K.R., Jafari, A.J., Kwon, Y.D., Lai, Y.T., Lemmin, T., McKee, K., Ohr, T.Y., Ou, L., Peng, D., Rowshan, A.P., Sheng, Z., Todd, J.P., Tsybovsky, Y., Viox, E.G., Wang, Y., Wei, H., Yang, Y., Zhou, A.F., Chen, R., Yang, L., Scorpio, D.G., McDermott, A.B., Shapiro, L., Carragher, B., Potter, C.S., Mascola, J.R., Kwong, P.D.
Nat. Med.
HeaderViral Protein
Released2018-02-08
Resolution3.600
CATH Insert Date03 Jun, 2018

PDB Images (52)

PDB Prints

PDB Chains (24)

Chain ID Date inserted into CATH CATH Status
2 03 Jun, 2018 Chopped
3 03 Jun, 2018 Chopped
4 03 Jun, 2018 Chopped
5 03 Jun, 2018 Chopped
6 03 Jun, 2018 Chopped
7 03 Jun, 2018 Chopped
8 03 Jun, 2018 Chopped
A 03 Jun, 2018 Holding pen
c 03 Jun, 2018 Holding pen
C 03 Jun, 2018 Chopped
d 03 Jun, 2018 Chopped
D 03 Jun, 2018 Holding pen
h 03 Jun, 2018 Chopped
H 03 Jun, 2018 Chopped
l 03 Jun, 2018 Chopped
L 03 Jun, 2018 Chopped
m 03 Jun, 2018 Chopped
M 03 Jun, 2018 Chopped
n 03 Jun, 2018 Chopped
N 03 Jun, 2018 Chopped
q 03 Jun, 2018 Chopped
Q 03 Jun, 2018 Chopped
r 03 Jun, 2018 Chopped
R 03 Jun, 2018 Chopped

CATH Domains (27)

Domain ID Date inserted into CATH Superfamily CATH Status
6cdi201 28 Jun, 2018 Holding pen
6cdi202 28 Jun, 2018 Holding pen
6cdi203 28 Jun, 2018 Holding pen
6cdi300 28 Jun, 2018 Holding pen
6cdi400 28 Jun, 2018 2.60.40.10 Assigned
6cdi500 28 Jun, 2018 Holding pen
6cdi600 28 Jun, 2018 2.60.40.10 Assigned
6cdi700 28 Jun, 2018 2.60.40.10 Assigned
6cdi800 28 Jun, 2018 2.60.40.10 Assigned
6cdiC01 28 Jun, 2018 Holding pen
6cdiC02 28 Jun, 2018 Holding pen
6cdiC03 28 Jun, 2018 Holding pen
6cdid01 28 Jun, 2018 Holding pen
6cdid02 28 Jun, 2018 Holding pen
6cdid03 28 Jun, 2018 Holding pen
6cdih00 28 Jun, 2018 Holding pen
6cdiH00 28 Jun, 2018 Holding pen
6cdil00 28 Jun, 2018 2.60.40.10 Assigned
6cdiL00 28 Jun, 2018 2.60.40.10 Assigned
6cdim00 28 Jun, 2018 Holding pen
6cdiM00 28 Jun, 2018 Holding pen
6cdin00 28 Jun, 2018 2.60.40.10 Assigned
6cdiN00 28 Jun, 2018 2.60.40.10 Assigned
6cdiq00 28 Jun, 2018 2.60.40.10 Assigned
6cdiQ00 28 Jun, 2018 2.60.40.10 Assigned
6cdir00 28 Jun, 2018 2.60.40.10 Assigned
6cdiR00 28 Jun, 2018 2.60.40.10 Assigned

UniProtKB Entries (6)

Accession Gene ID Taxon Description
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S7 Q2N0S7_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160
Q2N0S5 Q2N0S5_9HIV1 Human immunodeficiency virus 1 Envelope glycoprotein gp160