PDB 6c0f

PDB Information

PDB6C0F
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Modular assembly of the nucleolar pre-60S ribosomal subunit.
Sanghai, Z.A., Miller, L., Molloy, K.R., Barandun, J., Hunziker, M., Chaker-Margot, M., Wang, J., Chait, B.T., Klinge, S.
Nature
HeaderRibosome
Released2017-12-29
Resolution3.700
CATH Insert Date03 Jun, 2018

PDB Images (64)

PDB Prints

PDB Chains (43)

Chain ID Date inserted into CATH CATH Status
1 03 Jun, 2018 Rejected
2 03 Jun, 2018 Rejected
6 03 Jun, 2018 Rejected
7 03 Jun, 2018 Holding pen
8 03 Jun, 2018 Write scan list
A 03 Jun, 2018 Chopped
b 03 Jun, 2018 Write scan list
B 03 Jun, 2018 Write scan list
C 03 Jun, 2018 Holding pen
D 03 Jun, 2018 Holding pen
e 03 Jun, 2018 Chopped
E 03 Jun, 2018 Chopped
f 03 Jun, 2018 Chopped
F 03 Jun, 2018 Chopped
G 03 Jun, 2018 Write scan list
h 03 Jun, 2018 Chopped
i 03 Jun, 2018 Write scan list
I 03 Jun, 2018 Holding pen
j 03 Jun, 2018 Holding pen
K 03 Jun, 2018 Holding pen
L 03 Jun, 2018 Chopped
m 03 Jun, 2018 Write scan list
M 03 Jun, 2018 Chopped
n 03 Jun, 2018 Holding pen
N 03 Jun, 2018 Chopped
o 03 Jun, 2018 Holding pen
O 03 Jun, 2018 Chopped
p 03 Jun, 2018 Write scan list
P 03 Jun, 2018 Chopped
q 03 Jun, 2018 Write scan list
Q 03 Jun, 2018 Chopped
s 03 Jun, 2018 Holding pen
S 03 Jun, 2018 Chopped
t 03 Jun, 2018 Chopped
u 03 Jun, 2018 Write scan list
v 03 Jun, 2018 Write scan list
V 03 Jun, 2018 Chopped
w 03 Jun, 2018 Write scan list
W 03 Jun, 2018 Write scan list
x 03 Jun, 2018 Rejected
y 03 Jun, 2018 Chopped
Y 03 Jun, 2018 Chopped
z 03 Jun, 2018 Holding pen

CATH Domains (20)

Domain ID Date inserted into CATH Superfamily CATH Status
6c0fA00 28 Jun, 2018 Holding pen
6c0fe00 28 Jun, 2018 Holding pen
6c0fE00 28 Jun, 2018 Holding pen
6c0ff00 28 Jun, 2018 2.40.10.190 Assigned
6c0fF00 28 Jun, 2018 Holding pen
6c0fh01 28 Jun, 2018 Holding pen
6c0fh02 28 Jun, 2018 6.10.250.3450 Assigned
6c0fL00 28 Jun, 2018 Holding pen
6c0fM01 28 Jun, 2018 2.30.30.30 Assigned
6c0fN00 28 Jun, 2018 3.40.1120.10 Assigned
6c0fO01 28 Jun, 2018 3.90.1180.10 Assigned
6c0fO02 28 Jun, 2018 1.20.5.4280 Assigned
6c0fP00 28 Jun, 2018 Holding pen
6c0fQ00 28 Jun, 2018 3.100.10.10 Assigned
6c0fS01 28 Jun, 2018 3.10.20.10 Assigned
6c0fS02 28 Jun, 2018 3.10.20.10 Assigned
6c0ft00 28 Jun, 2018 Holding pen
6c0fV00 28 Jun, 2018 2.40.150.20 Assigned
6c0fy00 28 Jun, 2018 3.75.10.10 Assigned
6c0fY00 28 Jun, 2018 2.30.30.30 Assigned

UniProtKB Entries (29)

Accession Gene ID Taxon Description
Q07915 RLP24_YEAST Saccharomyces cerevisiae S288C Ribosome biogenesis protein RLP24
P14126 RL3_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L3
Q03532 HAS1_YEAST Saccharomyces cerevisiae S288C ATP-dependent RNA helicase HAS1
P05748 RL15A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L15-A
Q12522 IF6_YEAST Saccharomyces cerevisiae S288C Eukaryotic translation initiation factor 6
P05745 RL36A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L36-A
Q08235 BRX1_YEAST Saccharomyces cerevisiae S288C Ribosome biogenesis protein BRX1
Q04660 ERB1_YEAST Saccharomyces cerevisiae S288C Ribosome biogenesis protein ERB1
P10664 RL4A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L4-A
P40693 RLP7_YEAST Saccharomyces cerevisiae S288C Ribosome biogenesis protein RLP7
Q02326 RL6A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L6-A
P05740 RL17A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L17-A
P05737 RL7A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L7-A
Q02892 NOG1_YEAST Saccharomyces cerevisiae S288C Nucleolar GTP-binding protein 1
P17076 RL8A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L8-A
P49166 RL37A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L37-A
P26784 RL16A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L16-A
P0CX23 RL20A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L20-A
P53261 PESC_YEAST Saccharomyces cerevisiae S288C Pescadillo homolog
P10962 MAK16_YEAST Saccharomyces cerevisiae S288C Protein MAK16
P0CX41 RL23A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L23-A
P53927 NOP15_YEAST Saccharomyces cerevisiae S288C Ribosome biogenesis protein 15
P38805 RPF1_YEAST Saccharomyces cerevisiae S288C Ribosome production factor 1
P0CX84 RL35A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L35-A
P36105 RL14A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L14-A
Q12690 RL13A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L13-A
P05744 RL33A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L33-A
P0CX49 RL18A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L18-A
P05743 RL26A_YEAST Saccharomyces cerevisiae S288C 60S ribosomal protein L26-A