PDB 6ap1

PDB Links
Overview

PDB Information

PDB	6AP1
Method	ELECTRON MICROSCOPY
Host Organism	Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Gene Source	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Primary Citation	The AAA ATPase Vps4 binds ESCRT-III substrates through a repeating array of dipeptide-binding pockets. Han, H., Monroe, N., Sundquist, W.I., Shen, P.S., Hill, C.P. Elife
Header	Transport Protein
Released	2017-08-16
Resolution	3.200
CATH Insert Date	17 Dec, 2017

PDB Images (44)

6ap1

PDB 6ap1

6ap1A

PDB Chain 6ap1A

6ap1B

PDB Chain 6ap1B

6ap1C

PDB Chain 6ap1C

6ap1D

PDB Chain 6ap1D

6ap1E

PDB Chain 6ap1E

6ap1F

PDB Chain 6ap1F

6ap1G

PDB Chain 6ap1G

6ap1H

PDB Chain 6ap1H

6ap1I

PDB Chain 6ap1I

6ap1J

PDB Chain 6ap1J

6ap1K

PDB Chain 6ap1K

6ap1L

PDB Chain 6ap1L

6ap1M

PDB Chain 6ap1M

6ap1N

PDB Chain 6ap1N

6ap1O

PDB Chain 6ap1O

6ap1P

PDB Chain 6ap1P

6ap1Q

PDB Chain 6ap1Q

6ap1R

PDB Chain 6ap1R

6ap1S

PDB Chain 6ap1S

6ap1A01

CATH Domain 6ap1A01

6ap1A02

CATH Domain 6ap1A02

6ap1B01

CATH Domain 6ap1B01

6ap1B02

CATH Domain 6ap1B02

6ap1C01

CATH Domain 6ap1C01

6ap1C02

CATH Domain 6ap1C02

6ap1D01

CATH Domain 6ap1D01

6ap1D02

CATH Domain 6ap1D02

6ap1E01

CATH Domain 6ap1E01

6ap1E02

CATH Domain 6ap1E02

6ap1F01

CATH Domain 6ap1F01

6ap1F02

CATH Domain 6ap1F02

6ap1H00

CATH Domain 6ap1H00

6ap1I00

CATH Domain 6ap1I00

6ap1J00

CATH Domain 6ap1J00

6ap1K00

CATH Domain 6ap1K00

6ap1L00

CATH Domain 6ap1L00

6ap1M00

CATH Domain 6ap1M00

6ap1N00

CATH Domain 6ap1N00

6ap1O00

CATH Domain 6ap1O00

6ap1P00

CATH Domain 6ap1P00

6ap1Q00

CATH Domain 6ap1Q00

6ap1R00

CATH Domain 6ap1R00

6ap1S00

CATH Domain 6ap1S00

PDB Prints

PDB Chains (19)

Chain ID	Date inserted into CATH	CATH Status
A	17 Dec, 2017	Chopped
B	17 Dec, 2017	Chopped
C	17 Dec, 2017	Chopped
D	17 Dec, 2017	Chopped
E	17 Dec, 2017	Chopped
F	17 Dec, 2017	Chopped
G	17 Dec, 2017	Rejected
H	17 Dec, 2017	Chopped
I	17 Dec, 2017	Chopped
J	17 Dec, 2017	Chopped
K	17 Dec, 2017	Chopped
L	17 Dec, 2017	Chopped
M	17 Dec, 2017	Chopped
N	17 Dec, 2017	Chopped
O	17 Dec, 2017	Chopped
P	17 Dec, 2017	Chopped
Q	17 Dec, 2017	Chopped
R	17 Dec, 2017	Chopped
S	17 Dec, 2017	Chopped

CATH Domains (24)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
6ap1A01	23 Dec, 2017	3.40.50.300	Assigned
6ap1A02	23 Dec, 2017	1.10.8.60	Assigned
6ap1B01	23 Dec, 2017	3.40.50.300	Assigned
6ap1B02	23 Dec, 2017	1.10.8.60	Assigned
6ap1C01	23 Dec, 2017	3.40.50.300	Assigned
6ap1C02	23 Dec, 2017	1.10.8.60	Assigned
6ap1D01	23 Dec, 2017	3.40.50.300	Assigned
6ap1D02	23 Dec, 2017	1.10.8.60	Assigned
6ap1E01	23 Dec, 2017	3.40.50.300	Assigned
6ap1E02	23 Dec, 2017	1.10.8.60	Assigned
6ap1F01	23 Dec, 2017	3.40.50.300	Assigned
6ap1F02	23 Dec, 2017	1.10.8.60	Assigned
6ap1H00	23 Dec, 2017	1.20.5.420	Assigned
6ap1I00	23 Dec, 2017	1.20.5.420	Assigned
6ap1J00	23 Dec, 2017	1.20.5.420	Assigned
6ap1K00	23 Dec, 2017	1.20.5.420	Assigned
6ap1L00	23 Dec, 2017	1.20.5.420	Assigned
6ap1M00	23 Dec, 2017	1.20.5.420	Assigned
6ap1N00	23 Dec, 2017	1.20.5.420	Assigned
6ap1O00	23 Dec, 2017	1.20.5.420	Assigned
6ap1P00	23 Dec, 2017	1.20.5.420	Assigned
6ap1Q00	23 Dec, 2017	1.20.5.420	Assigned
6ap1R00	23 Dec, 2017	1.20.5.420	Assigned
6ap1S00	23 Dec, 2017	1.20.5.420	Assigned

UniProtKB Entries (25)

Accession	Gene ID	Taxon	Description
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
P36108	DID4_YEAST	Saccharomyces cerevisiae S288C	DOA4-independent degradation protein 4
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
P52917	VPS4_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein 4
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
Q9I747	HCP1_PSEAE	Pseudomonas aeruginosa PAO1	Protein hcp1
Q06263	VTA1_YEAST	Saccharomyces cerevisiae S288C	Vacuolar protein sorting-associated protein VTA1