PDB 5z58
PDB Information
| PDB | 5Z58 |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Structure of the human activated spliceosome in three conformational states.
Cell Res.
|
| Header | Splicing |
| Released | 2018-01-17 |
| Resolution | 4.900 |
| CATH Insert Date | 23 Sep, 2018 |
PDB Images (47)
5z58
PDB 5z58
5z581
PDB Chain 5z581
5z582
PDB Chain 5z582
5z583
PDB Chain 5z583
5z584
PDB Chain 5z584
5z585
PDB Chain 5z585
5z586
PDB Chain 5z586
5z587
PDB Chain 5z587
5z58a
PDB Chain 5z58a
5z58A
PDB Chain 5z58A
5z58b
PDB Chain 5z58b
5z58B
PDB Chain 5z58B
5z58c
PDB Chain 5z58c
5z58C
PDB Chain 5z58C
5z58d
PDB Chain 5z58d
5z58D
PDB Chain 5z58D
5z58e
PDB Chain 5z58e
5z58E
PDB Chain 5z58E
5z58f
PDB Chain 5z58f
5z58F
PDB Chain 5z58F
5z58g
PDB Chain 5z58g
5z58G
PDB Chain 5z58G
5z58h
PDB Chain 5z58h
5z58H
PDB Chain 5z58H
5z58i
PDB Chain 5z58i
5z58j
PDB Chain 5z58j
5z58J
PDB Chain 5z58J
5z58k
PDB Chain 5z58k
5z58l
PDB Chain 5z58l
5z58L
PDB Chain 5z58L
5z58m
PDB Chain 5z58m
5z58M
PDB Chain 5z58M
5z58n
PDB Chain 5z58n
5z58o
PDB Chain 5z58o
5z58p
PDB Chain 5z58p
5z58P
PDB Chain 5z58P
5z58R
PDB Chain 5z58R
5z58T
PDB Chain 5z58T
5z58u
PDB Chain 5z58u
5z58v
PDB Chain 5z58v
5z58V
PDB Chain 5z58V
5z58w
PDB Chain 5z58w
5z58x
PDB Chain 5z58x
5z58X
PDB Chain 5z58X
5z58Y
PDB Chain 5z58Y
5z58z
PDB Chain 5z58z
5z58Z
PDB Chain 5z58Z
PDB Prints
PDB Chains (46)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 1 | 23 Sep, 2018 | Rejected |
| 2 | 23 Sep, 2018 | Rejected |
| 3 | 23 Sep, 2018 | Rejected |
| 4 | 23 Sep, 2018 | Rejected |
| 5 | 23 Sep, 2018 | Rejected |
| 6 | 23 Sep, 2018 | Rejected |
| 7 | 23 Sep, 2018 | Rejected |
| a | 23 Sep, 2018 | Rejected |
| A | 23 Sep, 2018 | Rejected |
| b | 23 Sep, 2018 | Rejected |
| B | 23 Sep, 2018 | Rejected |
| c | 23 Sep, 2018 | Rejected |
| C | 23 Sep, 2018 | Rejected |
| d | 23 Sep, 2018 | Rejected |
| D | 23 Sep, 2018 | Rejected |
| e | 23 Sep, 2018 | Rejected |
| E | 23 Sep, 2018 | Rejected |
| f | 23 Sep, 2018 | Rejected |
| F | 23 Sep, 2018 | Rejected |
| g | 23 Sep, 2018 | Rejected |
| G | 23 Sep, 2018 | Rejected |
| h | 23 Sep, 2018 | Rejected |
| H | 23 Sep, 2018 | Rejected |
| i | 23 Sep, 2018 | Rejected |
| j | 23 Sep, 2018 | Rejected |
| J | 23 Sep, 2018 | Rejected |
| k | 23 Sep, 2018 | Rejected |
| l | 23 Sep, 2018 | Rejected |
| L | 23 Sep, 2018 | Rejected |
| m | 23 Sep, 2018 | Rejected |
| M | 23 Sep, 2018 | Rejected |
| n | 23 Sep, 2018 | Rejected |
| o | 23 Sep, 2018 | Rejected |
| p | 23 Sep, 2018 | Rejected |
| P | 23 Sep, 2018 | Rejected |
| R | 23 Sep, 2018 | Rejected |
| T | 23 Sep, 2018 | Rejected |
| u | 23 Sep, 2018 | Rejected |
| v | 23 Sep, 2018 | Rejected |
| V | 23 Sep, 2018 | Rejected |
| w | 23 Sep, 2018 | Rejected |
| x | 23 Sep, 2018 | Rejected |
| X | 23 Sep, 2018 | Rejected |
| Y | 23 Sep, 2018 | Rejected |
| z | 23 Sep, 2018 | Rejected |
| Z | 23 Sep, 2018 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (35)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q6UX04 | CWC27_HUMAN | Homo sapiens | Spliceosome-associated protein CWC27 homolog |
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| Q15459 | SF3A1_HUMAN | Homo sapiens | Splicing factor 3A subunit 1 |
| Q15428 | SF3A2_HUMAN | Homo sapiens | Splicing factor 3A subunit 2 |
| Q15393 | SF3B3_HUMAN | Homo sapiens | Splicing factor 3B subunit 3 |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| Q9Y388 | RBMX2_HUMAN | Homo sapiens | RNA-binding motif protein, X-linked 2 |
| Q9Y3B4 | SF3B6_HUMAN | Homo sapiens | Splicing factor 3B subunit 6 |
| Q96DI7 | SNR40_HUMAN | Homo sapiens | U5 small nuclear ribonucleoprotein 40 kDa protein |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| Q9BZJ0 | CRNL1_HUMAN | Homo sapiens | Crooked neck-like protein 1 |
| Q8TAD8 | SNIP1_HUMAN | Homo sapiens | Smad nuclear-interacting protein 1 |
| Q9HCG8 | CWC22_HUMAN | Homo sapiens | Pre-mRNA-splicing factor CWC22 homolog |
| P08579 | RU2B_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein B'' |
| O60231 | DHX16_HUMAN | Homo sapiens | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 |
| Q99459 | CDC5L_HUMAN | Homo sapiens | Cell division cycle 5-like protein |
| O43660 | PLRG1_HUMAN | Homo sapiens | Pleiotropic regulator 1 |
| P09661 | RU2A_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein A' |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
| O75643 | U520_HUMAN | Homo sapiens | U5 small nuclear ribonucleoprotein 200 kDa helicase |
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| O75533 | SF3B1_HUMAN | Homo sapiens | Splicing factor 3B subunit 1 |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| Q6P2Q9 | PRP8_HUMAN | Homo sapiens | Pre-mRNA-processing-splicing factor 8 |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| Q15427 | SF3B4_HUMAN | Homo sapiens | Splicing factor 3B subunit 4 |
| O15541 | R113A_HUMAN | Homo sapiens | E3 ubiquitin-protein ligase RNF113A |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| Q15029 | U5S1_HUMAN | Homo sapiens | 116 kDa U5 small nuclear ribonucleoprotein component |
