PDB 5z3g

PDB Links
Overview

PDB Information

PDB	5Z3G
Method	ELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation	Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate. Zhou, D., Zhu, X., Zheng, S., Tan, D., Dong, M.Q., Ye, K. Protein Cell
Header	Ribosome
Released	2018-01-06
Resolution	3.650
CATH Insert Date	03 Jun, 2018

PDB Images (57)

5z3g

PDB 5z3g

5z3ga

PDB Chain 5z3ga

5z3gA

PDB Chain 5z3gA

5z3gb

PDB Chain 5z3gb

5z3gB

PDB Chain 5z3gB

5z3gc

PDB Chain 5z3gc

5z3gC

PDB Chain 5z3gC

5z3gd

PDB Chain 5z3gd

5z3gD

PDB Chain 5z3gD

5z3gE

PDB Chain 5z3gE

5z3gF

PDB Chain 5z3gF

5z3gG

PDB Chain 5z3gG

5z3gH

PDB Chain 5z3gH

5z3gi

PDB Chain 5z3gi

5z3gI

PDB Chain 5z3gI

5z3gj

PDB Chain 5z3gj

5z3gJ

PDB Chain 5z3gJ

5z3gK

PDB Chain 5z3gK

5z3gl

PDB Chain 5z3gl

5z3gL

PDB Chain 5z3gL

5z3gm

PDB Chain 5z3gm

5z3gM

PDB Chain 5z3gM

5z3gn

PDB Chain 5z3gn

5z3gN

PDB Chain 5z3gN

5z3gO

PDB Chain 5z3gO

5z3gP

PDB Chain 5z3gP

5z3gQ

PDB Chain 5z3gQ

5z3gR

PDB Chain 5z3gR

5z3gS

PDB Chain 5z3gS

5z3gT

PDB Chain 5z3gT

5z3gU

PDB Chain 5z3gU

5z3gV

PDB Chain 5z3gV

5z3gW

PDB Chain 5z3gW

5z3gX

PDB Chain 5z3gX

5z3gY

PDB Chain 5z3gY

5z3gZ

PDB Chain 5z3gZ

5z3gc00

CATH Domain 5z3gc00

5z3gD00

CATH Domain 5z3gD00

5z3gi00

CATH Domain 5z3gi00

5z3gI00

CATH Domain 5z3gI00

5z3gj00

CATH Domain 5z3gj00

5z3gJ00

CATH Domain 5z3gJ00

5z3gl01

CATH Domain 5z3gl01

5z3gL01

CATH Domain 5z3gL01

5z3gl02

CATH Domain 5z3gl02

5z3gL02

CATH Domain 5z3gL02

5z3gN00

CATH Domain 5z3gN00

5z3gP00

CATH Domain 5z3gP00

5z3gQ01

CATH Domain 5z3gQ01

5z3gR00

CATH Domain 5z3gR00

5z3gS01

CATH Domain 5z3gS01

5z3gS02

CATH Domain 5z3gS02

5z3gT00

CATH Domain 5z3gT00

5z3gU00

CATH Domain 5z3gU00

5z3gV00

CATH Domain 5z3gV00

5z3gW01

CATH Domain 5z3gW01

5z3gW02

CATH Domain 5z3gW02

PDB Prints

PDB Chains (35)

Chain ID	Date inserted into CATH	CATH Status
a	03 Jun, 2018	Holding pen
A	03 Jun, 2018	Rejected
b	03 Jun, 2018	Holding pen
B	03 Jun, 2018	Rejected
c	03 Jun, 2018	Chopped
C	03 Jun, 2018	Rejected
d	03 Jun, 2018	Write scan list
D	03 Jun, 2018	Chopped
E	03 Jun, 2018	Holding pen
F	03 Jun, 2018	Holding pen
G	03 Jun, 2018	Holding pen
H	03 Jun, 2018	Holding pen
i	03 Jun, 2018	Chopped
I	03 Jun, 2018	Chopped
j	03 Jun, 2018	Chopped
J	03 Jun, 2018	Chopped
K	03 Jun, 2018	Holding pen
l	03 Jun, 2018	Chopped
L	03 Jun, 2018	Chopped
m	03 Jun, 2018	Holding pen
M	03 Jun, 2018	Holding pen
n	03 Jun, 2018	Holding pen
N	03 Jun, 2018	Chopped
O	03 Jun, 2018	Holding pen
P	03 Jun, 2018	Chopped
Q	03 Jun, 2018	Chopped
R	03 Jun, 2018	Chopped
S	03 Jun, 2018	Chopped
T	03 Jun, 2018	Chopped
U	03 Jun, 2018	Chopped
V	03 Jun, 2018	Chopped
W	03 Jun, 2018	Chopped
X	03 Jun, 2018	Holding pen
Y	03 Jun, 2018	Holding pen
Z	03 Jun, 2018	Holding pen

CATH Domains (21)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5z3gc00	28 Jun, 2018	2.30.30.30	Assigned
5z3gD00	28 Jun, 2018		Holding pen
5z3gi00	28 Jun, 2018		Holding pen
5z3gI00	28 Jun, 2018		Holding pen
5z3gj00	28 Jun, 2018	2.40.10.190	Assigned
5z3gJ00	28 Jun, 2018		Holding pen
5z3gl01	28 Jun, 2018		Holding pen
5z3gL01	28 Jun, 2018	3.90.930.12	Assigned
5z3gl02	28 Jun, 2018	6.10.250.3450	Assigned
5z3gL02	28 Jun, 2018	3.90.930.12	Assigned
5z3gN00	28 Jun, 2018	3.75.10.10	Assigned
5z3gP00	28 Jun, 2018		Holding pen
5z3gQ01	28 Jun, 2018	2.30.30.30	Assigned
5z3gR00	28 Jun, 2018	3.40.1120.10	Assigned
5z3gS01	28 Jun, 2018	3.90.1180.10	Assigned
5z3gS02	28 Jun, 2018	1.20.5.4280	Assigned
5z3gT00	28 Jun, 2018		Holding pen
5z3gU00	28 Jun, 2018	3.100.10.10	Assigned
5z3gV00	28 Jun, 2018		Holding pen
5z3gW01	28 Jun, 2018	3.10.20.10	Assigned
5z3gW02	28 Jun, 2018	3.10.20.10	Assigned

UniProtKB Entries (26)

Accession	Gene ID	Taxon	Description
Q08235	BRX1_YEAST	Saccharomyces cerevisiae S288C	Ribosome biogenesis protein BRX1
P05740	RL17A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L17-A
P26784	RL16A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L16-A
P05744	RL33A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L33-A
Q02326	RL6A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L6-A
P53927	NOP15_YEAST	Saccharomyces cerevisiae S288C	Ribosome biogenesis protein 15
P49166	RL37A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L37-A
P38805	RPF1_YEAST	Saccharomyces cerevisiae S288C	Ribosome production factor 1
P0CX84	RL35A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L35-A
P14126	RL3_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L3
P05745	RL36A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L36-A
P05738	RL9A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L9-A
Q12690	RL13A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L13-A
P05748	RL15A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L15-A
P05737	RL7A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L7-A
P0CX49	RL18A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L18-A
P17076	RL8A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L8-A
P0CX23	RL20A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L20-A
P36105	RL14A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L14-A
P10962	MAK16_YEAST	Saccharomyces cerevisiae S288C	Protein MAK16
Q03532	HAS1_YEAST	Saccharomyces cerevisiae S288C	ATP-dependent RNA helicase HAS1
P05743	RL26A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L26-A
Q12522	IF6_YEAST	Saccharomyces cerevisiae S288C	Eukaryotic translation initiation factor 6
P10664	RL4A_YEAST	Saccharomyces cerevisiae S288C	60S ribosomal protein L4-A
P53261	PESC_YEAST	Saccharomyces cerevisiae S288C	Pescadillo homolog
P40693	RLP7_YEAST	Saccharomyces cerevisiae S288C	Ribosome biogenesis protein RLP7