PDB 5yxy

PDB Information

PDB5YXY
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli BL21(DE3)
Gene SourceThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Primary Citation
Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA.
Kwon, S., Watanabe, S., Nishitani, Y., Kawashima, T., Kanai, T., Atomi, H., Miki, K.
Proc. Natl. Acad. Sci. U.S.A.
HeaderMetal Binding Protein
Released2017-12-07
Resolution3.300
CATH Insert Date06 Jul, 2018

PDB Images (16)

PDB Prints

PDB Chains (6)

Chain ID Date inserted into CATH CATH Status
A 06 Jul, 2018 Chopped
B 06 Jul, 2018 Chopped
C 06 Jul, 2018 Chopped
D 06 Jul, 2018 Chopped
E 06 Jul, 2018 Chopped
F 06 Jul, 2018 Chopped

CATH Domains (9)

Domain ID Date inserted into CATH Superfamily CATH Status
5yxyA00 19 Jul, 2018 Holding pen
5yxyB00 19 Jul, 2018 Write scan list
5yxyC00 19 Jul, 2018 Holding pen
5yxyD01 19 Jul, 2018 3.30.2320.50 Assigned
5yxyD02 19 Jul, 2018 Holding pen
5yxyE01 19 Jul, 2018 3.30.2320.50 Assigned
5yxyE02 19 Jul, 2018 Holding pen
5yxyF01 19 Jul, 2018 3.30.2320.50 Assigned
5yxyF02 19 Jul, 2018 Holding pen

UniProtKB Entries (6)

Accession Gene ID Taxon Description
Q8NKS2 Q8NKS2_THEKO Thermococcus kodakarensis KOD1 Cytosolic NiFe-hydrogenase, alpha subunit
Q8NKS2 Q8NKS2_THEKO Thermococcus kodakarensis KOD1 Cytosolic NiFe-hydrogenase, alpha subunit
Q5JIH3 HYPA_THEKO Thermococcus kodakarensis KOD1 Hydrogenase maturation factor HypA
Q8NKS2 Q8NKS2_THEKO Thermococcus kodakarensis KOD1 Cytosolic NiFe-hydrogenase, alpha subunit
Q5JIH3 HYPA_THEKO Thermococcus kodakarensis KOD1 Hydrogenase maturation factor HypA
Q5JIH3 HYPA_THEKO Thermococcus kodakarensis KOD1 Hydrogenase maturation factor HypA