PDB 5xnl

PDB Links
Overview

PDB Information

PDB	5XNL
Method	ELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation	Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex Su, X., Ma, J., Wei, X., Cao, P., Zhu, D., Chang, W., Liu, Z., Zhang, X., Li, M. Science
Header	Membrane Protein
Released	2017-05-23
Resolution	2.700
CATH Insert Date	14 Nov, 2017

PDB Images (101)

5xnl

PDB 5xnl

5xnl1

PDB Chain 5xnl1

5xnl2

PDB Chain 5xnl2

5xnl3

PDB Chain 5xnl3

5xnl4

PDB Chain 5xnl4

5xnl5

PDB Chain 5xnl5

5xnl6

PDB Chain 5xnl6

5xnl7

PDB Chain 5xnl7

5xnl8

PDB Chain 5xnl8

5xnla

PDB Chain 5xnla

5xnlA

PDB Chain 5xnlA

5xnlb

PDB Chain 5xnlb

5xnlB

PDB Chain 5xnlB

5xnlc

PDB Chain 5xnlc

5xnlC

PDB Chain 5xnlC

5xnld

PDB Chain 5xnld

5xnlD

PDB Chain 5xnlD

5xnle

PDB Chain 5xnle

5xnlE

PDB Chain 5xnlE

5xnlf

PDB Chain 5xnlf

5xnlF

PDB Chain 5xnlF

5xnlg

PDB Chain 5xnlg

5xnlG

PDB Chain 5xnlG

5xnlh

PDB Chain 5xnlh

5xnlH

PDB Chain 5xnlH

5xnli

PDB Chain 5xnli

5xnlI

PDB Chain 5xnlI

5xnlj

PDB Chain 5xnlj

5xnlJ

PDB Chain 5xnlJ

5xnlk

PDB Chain 5xnlk

5xnlK

PDB Chain 5xnlK

5xnll

PDB Chain 5xnll

5xnlL

PDB Chain 5xnlL

5xnlm

PDB Chain 5xnlm

5xnlM

PDB Chain 5xnlM

5xnln

PDB Chain 5xnln

5xnlN

PDB Chain 5xnlN

5xnlo

PDB Chain 5xnlo

5xnlO

PDB Chain 5xnlO

5xnlp

PDB Chain 5xnlp

5xnlP

PDB Chain 5xnlP

5xnlq

PDB Chain 5xnlq

5xnlQ

PDB Chain 5xnlQ

5xnlr

PDB Chain 5xnlr

5xnlR

PDB Chain 5xnlR

5xnls

PDB Chain 5xnls

5xnlS

PDB Chain 5xnlS

5xnlt

PDB Chain 5xnlt

5xnlT

PDB Chain 5xnlT

5xnlw

PDB Chain 5xnlw

5xnlW

PDB Chain 5xnlW

5xnlx

PDB Chain 5xnlx

5xnlX

PDB Chain 5xnlX

5xnly

PDB Chain 5xnly

5xnlY

PDB Chain 5xnlY

5xnlz

PDB Chain 5xnlz

5xnlZ

PDB Chain 5xnlZ

5xnl101

CATH Domain 5xnl101

5xnl201

CATH Domain 5xnl201

5xnl301

CATH Domain 5xnl301

5xnl400

CATH Domain 5xnl400

5xnl501

CATH Domain 5xnl501

5xnl601

CATH Domain 5xnl601

5xnl701

CATH Domain 5xnl701

5xnl800

CATH Domain 5xnl800

5xnla00

CATH Domain 5xnla00

5xnlA00

CATH Domain 5xnlA00

5xnlb01

CATH Domain 5xnlb01

5xnlB01

CATH Domain 5xnlB01

5xnlb02

CATH Domain 5xnlb02

5xnlB02

CATH Domain 5xnlB02

5xnlc01

CATH Domain 5xnlc01

5xnlC01

CATH Domain 5xnlC01

5xnlc02

CATH Domain 5xnlc02

5xnlC02

CATH Domain 5xnlC02

5xnld00

CATH Domain 5xnld00

5xnlD00

CATH Domain 5xnlD00

5xnle00

CATH Domain 5xnle00

5xnlE00

CATH Domain 5xnlE00

5xnlg01

CATH Domain 5xnlg01

5xnlG01

CATH Domain 5xnlG01

5xnlh01

CATH Domain 5xnlh01

5xnlH01

CATH Domain 5xnlH01

5xnln01

CATH Domain 5xnln01

5xnlN01

CATH Domain 5xnlN01

5xnlo01

CATH Domain 5xnlo01

5xnlo02

CATH Domain 5xnlo02

5xnlp00

CATH Domain 5xnlp00

5xnlP00

CATH Domain 5xnlP00

5xnlq00

CATH Domain 5xnlq00

5xnlQ00

CATH Domain 5xnlQ00

5xnlr00

CATH Domain 5xnlr00

5xnlR00

CATH Domain 5xnlR00

5xnls01

CATH Domain 5xnls01

5xnlS01

CATH Domain 5xnlS01

5xnlw00

CATH Domain 5xnlw00

5xnlW00

CATH Domain 5xnlW00

5xnly01

CATH Domain 5xnly01

5xnlY01

CATH Domain 5xnlY01

5xnlz00

CATH Domain 5xnlz00

5xnlZ00

CATH Domain 5xnlZ00

PDB Prints

PDB Chains (56)

Chain ID	Date inserted into CATH	CATH Status
1	14 Nov, 2017	Chopped
2	14 Nov, 2017	Chopped
3	14 Nov, 2017	Chopped
4	14 Nov, 2017	Chopped
5	14 Nov, 2017	Chopped
6	14 Nov, 2017	Chopped
7	14 Nov, 2017	Chopped
8	14 Nov, 2017	Chopped
a	14 Nov, 2017	Chopped
A	14 Nov, 2017	Chopped
b	14 Nov, 2017	Chopped
B	14 Nov, 2017	Chopped
c	14 Nov, 2017	Chopped
C	14 Nov, 2017	Chopped
d	14 Nov, 2017	Chopped
D	14 Nov, 2017	Chopped
e	14 Nov, 2017	Chopped
E	14 Nov, 2017	Chopped
f	14 Nov, 2017	Rejected
F	14 Nov, 2017	Rejected
g	14 Nov, 2017	Chopped
G	14 Nov, 2017	Chopped
h	14 Nov, 2017	Chopped
H	14 Nov, 2017	Chopped
i	14 Nov, 2017	Rejected
I	14 Nov, 2017	Rejected
j	14 Nov, 2017	Rejected
J	14 Nov, 2017	Rejected
k	14 Nov, 2017	Rejected
K	14 Nov, 2017	Rejected
l	14 Nov, 2017	Rejected
L	14 Nov, 2017	Rejected
m	14 Nov, 2017	Rejected
M	14 Nov, 2017	Rejected
n	14 Nov, 2017	Chopped
N	14 Nov, 2017	Chopped
o	14 Nov, 2017	Chopped
O	14 Nov, 2017	Holding pen
p	14 Nov, 2017	Chopped
P	14 Nov, 2017	Chopped
q	14 Nov, 2017	Chopped
Q	14 Nov, 2017	Chopped
r	14 Nov, 2017	Chopped
R	14 Nov, 2017	Chopped
s	14 Nov, 2017	Chopped
S	14 Nov, 2017	Chopped
t	14 Nov, 2017	Rejected
T	14 Nov, 2017	Rejected
w	14 Nov, 2017	Chopped
W	14 Nov, 2017	Chopped
x	14 Nov, 2017	Rejected
X	14 Nov, 2017	Rejected
y	14 Nov, 2017	Chopped
Y	14 Nov, 2017	Chopped
z	14 Nov, 2017	Chopped
Z	14 Nov, 2017	Chopped

CATH Domains (44)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5xnl101	23 Mar, 2018		Holding pen
5xnl201	23 Mar, 2018		Holding pen
5xnl301	10 Dec, 2017	1.10.3460.10	Assigned
5xnl400	04 May, 2018		Holding pen
5xnl501	23 Mar, 2018		Holding pen
5xnl601	23 Mar, 2018		Holding pen
5xnl701	10 Dec, 2017	1.10.3460.10	Assigned
5xnl800	05 May, 2018		Holding pen
5xnla00	10 Dec, 2017		Holding pen
5xnlA00	10 Dec, 2017		Holding pen
5xnlb01	10 Dec, 2017		Holding pen
5xnlB01	10 Dec, 2017		Holding pen
5xnlb02	10 Dec, 2017	3.10.680.10	Assigned
5xnlB02	10 Dec, 2017	3.10.680.10	Assigned
5xnlc01	10 Dec, 2017		Holding pen
5xnlC01	10 Dec, 2017		Holding pen
5xnlc02	10 Dec, 2017	1.10.10.670	Assigned
5xnlC02	10 Dec, 2017	1.10.10.670	Assigned
5xnld00	10 Dec, 2017		Holding pen
5xnlD00	10 Dec, 2017		Holding pen
5xnle00	10 Dec, 2017	1.20.5.860	Assigned
5xnlE00	10 Dec, 2017	1.20.5.860	Assigned
5xnlg01	23 Mar, 2018		Holding pen
5xnlG01	23 Mar, 2018		Holding pen
5xnlh01	10 Dec, 2017	1.20.5.880	Assigned
5xnlH01	10 Dec, 2017	1.20.5.880	Assigned
5xnln01	23 Mar, 2018		Holding pen
5xnlN01	23 Mar, 2018		Holding pen
5xnlo01	10 Dec, 2017	2.40.160.30	Assigned
5xnlo02	10 Dec, 2017	3.30.2050.10	Assigned
5xnlp00	16 Dec, 2017	3.40.1000.10	Assigned
5xnlP00	16 Dec, 2017	3.40.1000.10	Assigned
5xnlq00	10 Dec, 2017	1.20.120.290	Assigned
5xnlQ00	10 Dec, 2017	1.20.120.290	Assigned
5xnlr00	23 Mar, 2018		Holding pen
5xnlR00	23 Mar, 2018		Holding pen
5xnls01	10 Dec, 2017	1.10.3460.10	Assigned
5xnlS01	10 Dec, 2017	1.10.3460.10	Assigned
5xnlw00	10 Dec, 2017		Holding pen
5xnlW00	10 Dec, 2017		Holding pen
5xnly01	23 Mar, 2018		Holding pen
5xnlY01	23 Mar, 2018		Holding pen
5xnlz00	10 Dec, 2017	1.10.287.740	Assigned
5xnlZ00	10 Dec, 2017	1.10.287.740	Assigned

UniProtKB Entries (36)

Accession	Gene ID	Taxon	Description
P13554	PSBE_PEA	Pisum sativum	Cytochrome b559 subunit alpha
P13555	PSBJ_PEA	Pisum sativum	Photosystem II reaction center protein J
Q8VYY1	Q8VYY1_PEA	Pisum sativum	Ultraviolet-B-repressible protein
P14226	PSBO_PEA	Pisum sativum	Oxygen-evolving enhancer protein 1, chloroplastic
Q8VYY1	Q8VYY1_PEA	Pisum sativum	Ultraviolet-B-repressible protein
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
Q9XQR6	Q9XQR6_PEA	Pisum sativum	Photosystem II CP47 reaction center protein
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P06004	PSBC_PEA	Pisum sativum	Photosystem II CP43 reaction center protein
P16059	PSBP_PEA	Pisum sativum	Oxygen-evolving enhancer protein 2, chloroplastic
P06004	PSBC_PEA	Pisum sativum	Photosystem II CP43 reaction center protein
Q7Y1T5	Q7Y1T5_PEA	Pisum sativum	Oxygen-evolving enhancer protein 3
Q7Y1T5	Q7Y1T5_PEA	Pisum sativum	Oxygen-evolving enhancer protein 3
Q32902	PSBZ_PEA	Pisum sativum	Photosystem II reaction center protein Z
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
Q9XQR6	Q9XQR6_PEA	Pisum sativum	Photosystem II CP47 reaction center protein
P06585	PSBA_PEA	Pisum sativum	Photosystem II protein D1
Q9XQR3	PSBH_PEA	Pisum sativum	Photosystem II reaction center protein H
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P06006	PSBD_PEA	Pisum sativum	Photosystem II D2 protein
P13555	PSBJ_PEA	Pisum sativum	Photosystem II reaction center protein J
Q32902	PSBZ_PEA	Pisum sativum	Photosystem II reaction center protein Z
P13554	PSBE_PEA	Pisum sativum	Cytochrome b559 subunit alpha
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
P06585	PSBA_PEA	Pisum sativum	Photosystem II protein D1
P14226	PSBO_PEA	Pisum sativum	Oxygen-evolving enhancer protein 1, chloroplastic
P16059	PSBP_PEA	Pisum sativum	Oxygen-evolving enhancer protein 2, chloroplastic
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic
Q04918	Q04918_PEA	Pisum sativum	Chlorophyll a-b binding protein, chloroplastic
P06006	PSBD_PEA	Pisum sativum	Photosystem II D2 protein
Q9XQR3	PSBH_PEA	Pisum sativum	Photosystem II reaction center protein H
Q04918	Q04918_PEA	Pisum sativum	Chlorophyll a-b binding protein, chloroplastic
P27490	CB28_PEA	Pisum sativum	Chlorophyll a-b binding protein 8, chloroplastic