PDB Information

PDB5OOM
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Structures of the human mitochondrial ribosome in native states of assembly.
Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V.
Nat. Struct. Mol. Biol.
HeaderRibosome
Released2017-08-08
Resolution3.030
CATH Insert Date14 Nov, 2017

PDB Images (79)

PDB Prints

PDB Chains (55)

Chain ID Date inserted into CATH CATH Status
0 14 Nov, 2017 Holding pen
1 14 Nov, 2017 Chopped
2 14 Nov, 2017 Chopped
3 14 Nov, 2017 Holding pen
5 14 Nov, 2017 Chopped
6 14 Nov, 2017 Holding pen
7 14 Nov, 2017 Holding pen
8 14 Nov, 2017 Chopped
9 14 Nov, 2017 Holding pen
a 14 Nov, 2017 Holding pen
A 14 Nov, 2017 Rejected
b 14 Nov, 2017 Chopped
B 14 Nov, 2017 Rejected
c 14 Nov, 2017 Holding pen
d 14 Nov, 2017 Holding pen
D 14 Nov, 2017 Write scan list
e 14 Nov, 2017 Holding pen
E 14 Nov, 2017 Holding pen
f 14 Nov, 2017 Holding pen
F 14 Nov, 2017 Chopped
g 14 Nov, 2017 Chopped
h 14 Nov, 2017 Holding pen
H 14 Nov, 2017 Holding pen
i 14 Nov, 2017 Holding pen
I 14 Nov, 2017 Chopped
j 14 Nov, 2017 Holding pen
J 14 Nov, 2017 Chopped
k 14 Nov, 2017 Chopped
K 14 Nov, 2017 Chopped
l 14 Nov, 2017 Rejected
L 14 Nov, 2017 Chopped
m 14 Nov, 2017 Chopped
M 14 Nov, 2017 Holding pen
N 14 Nov, 2017 Holding pen
o 14 Nov, 2017 Holding pen
O 14 Nov, 2017 Holding pen
p 14 Nov, 2017 Holding pen
P 14 Nov, 2017 Chopped
q 14 Nov, 2017 Chopped
Q 14 Nov, 2017 Holding pen
r 14 Nov, 2017 Holding pen
R 14 Nov, 2017 Holding pen
s 14 Nov, 2017 Chopped
S 14 Nov, 2017 Holding pen
t 14 Nov, 2017 Rejected
T 14 Nov, 2017 Chopped
u 14 Nov, 2017 Chopped
U 14 Nov, 2017 Chopped
v 14 Nov, 2017 Chopped
V 14 Nov, 2017 Holding pen
w 14 Nov, 2017 Chopped
W 14 Nov, 2017 Chopped
X 14 Nov, 2017 Holding pen
Y 14 Nov, 2017 Holding pen
Z 14 Nov, 2017 Holding pen

CATH Domains (23)

Domain ID Date inserted into CATH Superfamily CATH Status
5oom100 10 Dec, 2017 2.20.28.120 Assigned
5oom200 10 Dec, 2017 1.10.287.3980 Assigned
5oom501 10 Dec, 2017 Holding pen
5oom800 10 Dec, 2017 6.10.250.3440 Assigned
5oomb00 10 Dec, 2017 3.40.30.10 Assigned
5oomF00 10 Dec, 2017 3.40.1370.10 Assigned
5oomg00 10 Dec, 2017 3.30.780.10 Assigned
5oomI00 10 Dec, 2017 3.30.70.1730 Assigned
5oomJ01 25 Jan, 2018 3.30.1550.10 Assigned
5oomJ02 25 Jan, 2018 1.10.10.250 Assigned
5oomk00 10 Dec, 2017 3.40.30.10 Assigned
5oomK00 10 Dec, 2017 3.90.1180.10 Assigned
5oomL00 10 Dec, 2017 2.40.150.20 Assigned
5oomm00 10 Dec, 2017 6.20.130.20 Assigned
5oomP00 10 Dec, 2017 3.30.420.80 Assigned
5oomq00 10 Dec, 2017 6.10.280.120 Assigned
5ooms01 10 Dec, 2017 Holding pen
5oomT00 10 Dec, 2017 3.90.470.10 Assigned
5oomu00 10 Dec, 2017 Holding pen
5oomU00 10 Dec, 2017 3.30.70.330 Assigned
5oomv00 16 Dec, 2017 Holding pen
5oomw00 10 Dec, 2017 Holding pen
5oomW00 10 Dec, 2017 2.40.50.100 Assigned

UniProtKB Entries (38)

Accession Gene ID Taxon Description
Q5T653 RM02_HUMAN Homo sapiens 39S ribosomal protein L2, mitochondrial
Q96EH3 MASU1_HUMAN Homo sapiens Mitochondrial assembly of ribosomal large subunit protein 1
Q7Z7F7 RM55_HUMAN Homo sapiens 39S ribosomal protein L55, mitochondrial
Q9Y3B7 RM11_HUMAN Homo sapiens 39S ribosomal protein L11, mitochondrial
Q9NX20 RM16_HUMAN Homo sapiens 39S ribosomal protein L16, mitochondrial
Q9NYK5 RM39_HUMAN Homo sapiens 39S ribosomal protein L39, mitochondrial
Q9H2W6 RM46_HUMAN Homo sapiens 39S ribosomal protein L46, mitochondrial
Q8TAE8 G45IP_HUMAN Homo sapiens Growth arrest and DNA damage-inducible proteins-interacting protein 1
P09001 RM03_HUMAN Homo sapiens 39S ribosomal protein L3, mitochondrial
Q9NQ50 RM40_HUMAN Homo sapiens 39S ribosomal protein L40, mitochondrial
Q6P1L8 RM14_HUMAN Homo sapiens 39S ribosomal protein L14, mitochondrial
Q9P015 RM15_HUMAN Homo sapiens 39S ribosomal protein L15, mitochondrial
Q9HD33 RM47_HUMAN Homo sapiens 39S ribosomal protein L47, mitochondrial
Q9P0M9 RM27_HUMAN Homo sapiens 39S ribosomal protein L27, mitochondrial
O14561 ACPM_HUMAN Homo sapiens Acyl carrier protein, mitochondrial
P49406 RM19_HUMAN Homo sapiens 39S ribosomal protein L19, mitochondrial
Q9NRX2 RM17_HUMAN Homo sapiens 39S ribosomal protein L17, mitochondrial
O75394 RM33_HUMAN Homo sapiens 39S ribosomal protein L33, mitochondrial
Q7Z7H8 RM10_HUMAN Homo sapiens 39S ribosomal protein L10, mitochondrial
Q8N983 RM43_HUMAN Homo sapiens 39S ribosomal protein L43, mitochondrial
Q96DV4 RM38_HUMAN Homo sapiens 39S ribosomal protein L38, mitochondrial
Q96A35 RM24_HUMAN Homo sapiens 39S ribosomal protein L24, mitochondrial
Q13405 RM49_HUMAN Homo sapiens 39S ribosomal protein L49, mitochondrial
Q9BYD3 RM04_HUMAN Homo sapiens 39S ribosomal protein L4, mitochondrial
Q9NWU5 RM22_HUMAN Homo sapiens 39S ribosomal protein L22, mitochondrial
Q96EL3 RM53_HUMAN Homo sapiens 39S ribosomal protein L53, mitochondrial
Q9H9J2 RM44_HUMAN Homo sapiens 39S ribosomal protein L44, mitochondrial
Q9BYD2 RM09_HUMAN Homo sapiens 39S ribosomal protein L9, mitochondrial
Q9BRJ2 RM45_HUMAN Homo sapiens 39S ribosomal protein L45, mitochondrial
Q8TCC3 RM30_HUMAN Homo sapiens 39S ribosomal protein L30, mitochondrial
Q14197 ICT1_HUMAN Homo sapiens Peptidyl-tRNA hydrolase ICT1, mitochondrial
Q9NVS2 RT18A_HUMAN Homo sapiens 39S ribosomal protein S18a, mitochondrial
Q96GC5 RM48_HUMAN Homo sapiens 39S ribosomal protein L48, mitochondrial
Q9BYD1 RM13_HUMAN Homo sapiens 39S ribosomal protein L13, mitochondrial
Q9H0U6 RM18_HUMAN Homo sapiens 39S ribosomal protein L18, mitochondrial
Q16540 RM23_HUMAN Homo sapiens 39S ribosomal protein L23, mitochondrial
Q9BQ48 RM34_HUMAN Homo sapiens 39S ribosomal protein L34, mitochondrial
Q9BYC9 RM20_HUMAN Homo sapiens 39S ribosomal protein L20, mitochondrial