PDB 5ool

PDB Links
Overview

PDB Information

PDB	5OOL
Method	ELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation	Structures of the human mitochondrial ribosome in native states of assembly. Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V. Nat. Struct. Mol. Biol.
Header	Ribosome
Released	2017-08-08
Resolution	3.060
CATH Insert Date	14 Nov, 2017

PDB Images (80)

5ool

PDB 5ool

5ool0

PDB Chain 5ool0

5ool1

PDB Chain 5ool1

5ool2

PDB Chain 5ool2

5ool3

PDB Chain 5ool3

5ool4

PDB Chain 5ool4

5ool5

PDB Chain 5ool5

5ool6

PDB Chain 5ool6

5ool7

PDB Chain 5ool7

5ool8

PDB Chain 5ool8

5ool9

PDB Chain 5ool9

5oola

PDB Chain 5oola

5oolA

PDB Chain 5oolA

5oolb

PDB Chain 5oolb

5oolB

PDB Chain 5oolB

5oolc

PDB Chain 5oolc

5oold

PDB Chain 5oold

5oolD

PDB Chain 5oolD

5oole

PDB Chain 5oole

5oolE

PDB Chain 5oolE

5oolf

PDB Chain 5oolf

5oolF

PDB Chain 5oolF

5oolg

PDB Chain 5oolg

5oolh

PDB Chain 5oolh

5oolH

PDB Chain 5oolH

5ooli

PDB Chain 5ooli

5oolI

PDB Chain 5oolI

5oolj

PDB Chain 5oolj

5oolJ

PDB Chain 5oolJ

5oolk

PDB Chain 5oolk

5oolK

PDB Chain 5oolK

5ooll

PDB Chain 5ooll

5oolL

PDB Chain 5oolL

5oolm

PDB Chain 5oolm

5oolM

PDB Chain 5oolM

5oolN

PDB Chain 5oolN

5oolo

PDB Chain 5oolo

5oolO

PDB Chain 5oolO

5oolp

PDB Chain 5oolp

5oolP

PDB Chain 5oolP

5oolq

PDB Chain 5oolq

5oolQ

PDB Chain 5oolQ

5oolr

PDB Chain 5oolr

5oolR

PDB Chain 5oolR

5ools

PDB Chain 5ools

5oolS

PDB Chain 5oolS

5oolt

PDB Chain 5oolt

5oolT

PDB Chain 5oolT

5oolu

PDB Chain 5oolu

5oolU

PDB Chain 5oolU

5oolv

PDB Chain 5oolv

5oolV

PDB Chain 5oolV

5oolw

PDB Chain 5oolw

5oolW

PDB Chain 5oolW

5oolX

PDB Chain 5oolX

5oolY

PDB Chain 5oolY

5oolZ

PDB Chain 5oolZ

5ool100

CATH Domain 5ool100

5ool200

CATH Domain 5ool200

5ool501

CATH Domain 5ool501

5ool800

CATH Domain 5ool800

5oolb00

CATH Domain 5oolb00

5oolF00

CATH Domain 5oolF00

5oolg00

CATH Domain 5oolg00

5oolI00

CATH Domain 5oolI00

5oolJ01

CATH Domain 5oolJ01

5oolJ02

CATH Domain 5oolJ02

5oolk00

CATH Domain 5oolk00

5oolK00

CATH Domain 5oolK00

5oolL00

CATH Domain 5oolL00

5oolm00

CATH Domain 5oolm00

5oolP00

CATH Domain 5oolP00

5oolq00

CATH Domain 5oolq00

5ools01

CATH Domain 5ools01

5oolT00

CATH Domain 5oolT00

5oolu00

CATH Domain 5oolu00

5oolU00

CATH Domain 5oolU00

5oolv00

CATH Domain 5oolv00

5oolw00

CATH Domain 5oolw00

5oolW00

CATH Domain 5oolW00

PDB Prints

PDB Chains (56)

Chain ID	Date inserted into CATH	CATH Status
0	14 Nov, 2017	Holding pen
1	14 Nov, 2017	Chopped
2	14 Nov, 2017	Chopped
3	14 Nov, 2017	Holding pen
4	14 Nov, 2017	Rejected
5	14 Nov, 2017	Chopped
6	14 Nov, 2017	Holding pen
7	14 Nov, 2017	Holding pen
8	14 Nov, 2017	Chopped
9	14 Nov, 2017	Holding pen
a	14 Nov, 2017	Holding pen
A	14 Nov, 2017	Rejected
b	14 Nov, 2017	Chopped
B	14 Nov, 2017	Rejected
c	14 Nov, 2017	Holding pen
d	14 Nov, 2017	Holding pen
D	14 Nov, 2017	Holding pen
e	14 Nov, 2017	Holding pen
E	14 Nov, 2017	Holding pen
f	14 Nov, 2017	Holding pen
F	14 Nov, 2017	Chopped
g	14 Nov, 2017	Chopped
h	14 Nov, 2017	Holding pen
H	14 Nov, 2017	Holding pen
i	14 Nov, 2017	Holding pen
I	14 Nov, 2017	Chopped
j	14 Nov, 2017	Holding pen
J	14 Nov, 2017	Chopped
k	14 Nov, 2017	Chopped
K	14 Nov, 2017	Chopped
l	14 Nov, 2017	Rejected
L	14 Nov, 2017	Chopped
m	14 Nov, 2017	Chopped
M	14 Nov, 2017	Holding pen
N	14 Nov, 2017	Holding pen
o	14 Nov, 2017	Holding pen
O	14 Nov, 2017	Holding pen
p	14 Nov, 2017	Holding pen
P	14 Nov, 2017	Chopped
q	14 Nov, 2017	Chopped
Q	14 Nov, 2017	Holding pen
r	14 Nov, 2017	Holding pen
R	14 Nov, 2017	Holding pen
s	14 Nov, 2017	Chopped
S	14 Nov, 2017	Holding pen
t	14 Nov, 2017	Rejected
T	14 Nov, 2017	Chopped
u	14 Nov, 2017	Chopped
U	14 Nov, 2017	Chopped
v	14 Nov, 2017	Chopped
V	14 Nov, 2017	Holding pen
w	14 Nov, 2017	Chopped
W	14 Nov, 2017	Chopped
X	14 Nov, 2017	Holding pen
Y	14 Nov, 2017	Holding pen
Z	14 Nov, 2017	Holding pen

CATH Domains (23)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5ool100	10 Dec, 2017	2.20.28.120	Assigned
5ool200	10 Dec, 2017	1.10.287.3980	Assigned
5ool501	10 Dec, 2017		Holding pen
5ool800	10 Dec, 2017	6.10.250.3440	Assigned
5oolb00	10 Dec, 2017	3.40.30.10	Assigned
5oolF00	10 Dec, 2017	3.40.1370.10	Assigned
5oolg00	10 Dec, 2017	3.30.780.10	Assigned
5oolI00	10 Dec, 2017	3.30.70.1730	Assigned
5oolJ01	25 Jan, 2018	3.30.1550.10	Assigned
5oolJ02	25 Jan, 2018	1.10.10.250	Assigned
5oolk00	10 Dec, 2017	3.40.30.10	Assigned
5oolK00	10 Dec, 2017	3.90.1180.10	Assigned
5oolL00	10 Dec, 2017	2.40.150.20	Assigned
5oolm00	10 Dec, 2017	6.20.130.20	Assigned
5oolP00	10 Dec, 2017	3.30.420.80	Assigned
5oolq00	10 Dec, 2017	6.10.280.120	Assigned
5ools01	10 Dec, 2017		Holding pen
5oolT00	10 Dec, 2017	3.90.470.10	Assigned
5oolu00	10 Dec, 2017		Write scan list
5oolU00	10 Dec, 2017	3.30.70.330	Assigned
5oolv00	16 Dec, 2017		Holding pen
5oolw00	10 Dec, 2017		Holding pen
5oolW00	10 Dec, 2017	2.40.50.100	Assigned

UniProtKB Entries (38)

Accession	Gene ID	Taxon	Description
Q9BYD1	RM13_HUMAN	Homo sapiens	39S ribosomal protein L13, mitochondrial
Q9H2W6	RM46_HUMAN	Homo sapiens	39S ribosomal protein L46, mitochondrial
Q5T653	RM02_HUMAN	Homo sapiens	39S ribosomal protein L2, mitochondrial
Q96GC5	RM48_HUMAN	Homo sapiens	39S ribosomal protein L48, mitochondrial
P09001	RM03_HUMAN	Homo sapiens	39S ribosomal protein L3, mitochondrial
Q9H9J2	RM44_HUMAN	Homo sapiens	39S ribosomal protein L44, mitochondrial
O75394	RM33_HUMAN	Homo sapiens	39S ribosomal protein L33, mitochondrial
Q16540	RM23_HUMAN	Homo sapiens	39S ribosomal protein L23, mitochondrial
Q8TCC3	RM30_HUMAN	Homo sapiens	39S ribosomal protein L30, mitochondrial
Q9NVS2	RT18A_HUMAN	Homo sapiens	39S ribosomal protein S18a, mitochondrial
Q9BQ48	RM34_HUMAN	Homo sapiens	39S ribosomal protein L34, mitochondrial
O14561	ACPM_HUMAN	Homo sapiens	Acyl carrier protein, mitochondrial
Q9NRX2	RM17_HUMAN	Homo sapiens	39S ribosomal protein L17, mitochondrial
Q9P015	RM15_HUMAN	Homo sapiens	39S ribosomal protein L15, mitochondrial
Q9BYD2	RM09_HUMAN	Homo sapiens	39S ribosomal protein L9, mitochondrial
Q9NX20	RM16_HUMAN	Homo sapiens	39S ribosomal protein L16, mitochondrial
Q13405	RM49_HUMAN	Homo sapiens	39S ribosomal protein L49, mitochondrial
Q9HD33	RM47_HUMAN	Homo sapiens	39S ribosomal protein L47, mitochondrial
Q96DV4	RM38_HUMAN	Homo sapiens	39S ribosomal protein L38, mitochondrial
Q9BYC9	RM20_HUMAN	Homo sapiens	39S ribosomal protein L20, mitochondrial
Q9H0U6	RM18_HUMAN	Homo sapiens	39S ribosomal protein L18, mitochondrial
Q9BRJ2	RM45_HUMAN	Homo sapiens	39S ribosomal protein L45, mitochondrial
Q9BYD3	RM04_HUMAN	Homo sapiens	39S ribosomal protein L4, mitochondrial
Q8TAE8	G45IP_HUMAN	Homo sapiens	Growth arrest and DNA damage-inducible proteins-interacting protein 1
Q96EH3	MASU1_HUMAN	Homo sapiens	Mitochondrial assembly of ribosomal large subunit protein 1
Q8N983	RM43_HUMAN	Homo sapiens	39S ribosomal protein L43, mitochondrial
Q7Z7F7	RM55_HUMAN	Homo sapiens	39S ribosomal protein L55, mitochondrial
Q9Y3B7	RM11_HUMAN	Homo sapiens	39S ribosomal protein L11, mitochondrial
Q7Z7H8	RM10_HUMAN	Homo sapiens	39S ribosomal protein L10, mitochondrial
Q14197	ICT1_HUMAN	Homo sapiens	Peptidyl-tRNA hydrolase ICT1, mitochondrial
P49406	RM19_HUMAN	Homo sapiens	39S ribosomal protein L19, mitochondrial
Q9NWU5	RM22_HUMAN	Homo sapiens	39S ribosomal protein L22, mitochondrial
Q9NQ50	RM40_HUMAN	Homo sapiens	39S ribosomal protein L40, mitochondrial
Q96A35	RM24_HUMAN	Homo sapiens	39S ribosomal protein L24, mitochondrial
Q9P0M9	RM27_HUMAN	Homo sapiens	39S ribosomal protein L27, mitochondrial
Q9NYK5	RM39_HUMAN	Homo sapiens	39S ribosomal protein L39, mitochondrial
Q6P1L8	RM14_HUMAN	Homo sapiens	39S ribosomal protein L14, mitochondrial
Q96EL3	RM53_HUMAN	Homo sapiens	39S ribosomal protein L53, mitochondrial