PDB 5okz

PDB Links
Overview

PDB Information

PDB	5OKZ
Method	X-RAY DIFFRACTION
Host Organism	Escherichia coli BL21(DE3)
Gene Source	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Primary Citation	Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase. Falk, S., Bonneau, F., Ebert, J., Kogel, A., Conti, E. Cell Rep
Header	Rna Binding Protein
Released	2017-07-26
Resolution	3.200
CATH Insert Date	14 Nov, 2017

PDB Images (85)

5okz

PDB 5okz

5okza

PDB Chain 5okza

5okzA

PDB Chain 5okzA

5okzb

PDB Chain 5okzb

5okzB

PDB Chain 5okzB

5okzc

PDB Chain 5okzc

5okzC

PDB Chain 5okzC

5okzd

PDB Chain 5okzd

5okzD

PDB Chain 5okzD

5okze

PDB Chain 5okze

5okzE

PDB Chain 5okzE

5okzf

PDB Chain 5okzf

5okzF

PDB Chain 5okzF

5okzg

PDB Chain 5okzg

5okzG

PDB Chain 5okzG

5okzh

PDB Chain 5okzh

5okzH

PDB Chain 5okzH

5okzi

PDB Chain 5okzi

5okzI

PDB Chain 5okzI

5okzj

PDB Chain 5okzj

5okzJ

PDB Chain 5okzJ

5okzk

PDB Chain 5okzk

5okzK

PDB Chain 5okzK

5okzl

PDB Chain 5okzl

5okzL

PDB Chain 5okzL

5okzm

PDB Chain 5okzm

5okzM

PDB Chain 5okzM

5okzn

PDB Chain 5okzn

5okzN

PDB Chain 5okzN

5okzO

PDB Chain 5okzO

5okzP

PDB Chain 5okzP

5okzQ

PDB Chain 5okzQ

5okzR

PDB Chain 5okzR

5okzS

PDB Chain 5okzS

5okzT

PDB Chain 5okzT

5okzU

PDB Chain 5okzU

5okzV

PDB Chain 5okzV

5okzW

PDB Chain 5okzW

5okzX

PDB Chain 5okzX

5okzY

PDB Chain 5okzY

5okzZ

PDB Chain 5okzZ

5okzA00

CATH Domain 5okzA00

5okza01

CATH Domain 5okza01

5okza02

CATH Domain 5okza02

5okza03

CATH Domain 5okza03

5okzB00

CATH Domain 5okzB00

5okzb01

CATH Domain 5okzb01

5okzb02

CATH Domain 5okzb02

5okzC00

CATH Domain 5okzC00

5okzD00

CATH Domain 5okzD00

5okze00

CATH Domain 5okze00

5okzE00

CATH Domain 5okzE00

5okzf00

CATH Domain 5okzf00

5okzF00

CATH Domain 5okzF00

5okzg00

CATH Domain 5okzg00

5okzG01

CATH Domain 5okzG01

5okzG02

CATH Domain 5okzG02

5okzG03

CATH Domain 5okzG03

5okzh00

CATH Domain 5okzh00

5okzH01

CATH Domain 5okzH01

5okzH02

CATH Domain 5okzH02

5okzi00

CATH Domain 5okzi00

5okzj00

CATH Domain 5okzj00

5okzK00

CATH Domain 5okzK00

5okzk01

CATH Domain 5okzk01

5okzk02

CATH Domain 5okzk02

5okzk03

CATH Domain 5okzk03

5okzL00

CATH Domain 5okzL00

5okzl01

CATH Domain 5okzl01

5okzl02

CATH Domain 5okzl02

5okzM00

CATH Domain 5okzM00

5okzN00

CATH Domain 5okzN00

5okzO00

CATH Domain 5okzO00

5okzP00

CATH Domain 5okzP00

5okzQ01

CATH Domain 5okzQ01

5okzQ02

CATH Domain 5okzQ02

5okzQ03

CATH Domain 5okzQ03

5okzR01

CATH Domain 5okzR01

5okzR02

CATH Domain 5okzR02

5okzU00

CATH Domain 5okzU00

5okzV00

CATH Domain 5okzV00

5okzW00

CATH Domain 5okzW00

5okzX00

CATH Domain 5okzX00

5okzY00

CATH Domain 5okzY00

5okzZ00

CATH Domain 5okzZ00

PDB Prints

PDB Chains (40)

Chain ID	Date inserted into CATH	CATH Status
a	14 Nov, 2017	Chopped
A	14 Nov, 2017	Chopped
b	14 Nov, 2017	Chopped
B	14 Nov, 2017	Chopped
c	14 Nov, 2017	Holding pen
C	14 Nov, 2017	Chopped
d	14 Nov, 2017	Rejected
D	14 Nov, 2017	Chopped
e	14 Nov, 2017	Chopped
E	14 Nov, 2017	Chopped
f	14 Nov, 2017	Chopped
F	14 Nov, 2017	Chopped
g	14 Nov, 2017	Chopped
G	14 Nov, 2017	Chopped
h	14 Nov, 2017	Chopped
H	14 Nov, 2017	Chopped
i	14 Nov, 2017	Chopped
I	14 Nov, 2017	Holding pen
j	14 Nov, 2017	Chopped
J	14 Nov, 2017	Rejected
k	14 Nov, 2017	Chopped
K	14 Nov, 2017	Chopped
l	14 Nov, 2017	Chopped
L	14 Nov, 2017	Chopped
m	14 Nov, 2017	Holding pen
M	14 Nov, 2017	Chopped
n	14 Nov, 2017	Rejected
N	14 Nov, 2017	Chopped
O	14 Nov, 2017	Chopped
P	14 Nov, 2017	Chopped
Q	14 Nov, 2017	Chopped
R	14 Nov, 2017	Chopped
S	14 Nov, 2017	Holding pen
T	14 Nov, 2017	Rejected
U	14 Nov, 2017	Chopped
V	14 Nov, 2017	Chopped
W	14 Nov, 2017	Chopped
X	14 Nov, 2017	Chopped
Y	14 Nov, 2017	Chopped
Z	14 Nov, 2017	Chopped

CATH Domains (44)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5okzA00	10 Dec, 2017	3.30.230.70	Assigned
5okza01	10 Dec, 2017	2.40.50.100	Assigned
5okza02	10 Dec, 2017	2.40.50.140	Assigned
5okza03	10 Dec, 2017	3.30.1370.10	Assigned
5okzB00	10 Dec, 2017	3.30.230.70	Assigned
5okzb01	10 Dec, 2017	2.40.50.100	Assigned
5okzb02	10 Dec, 2017		Holding pen
5okzC00	10 Dec, 2017	3.30.230.70	Assigned
5okzD00	10 Dec, 2017	3.30.230.70	Assigned
5okze00	10 Dec, 2017	3.30.230.70	Assigned
5okzE00	10 Dec, 2017	3.30.230.70	Assigned
5okzf00	10 Dec, 2017	3.30.230.70	Assigned
5okzF00	10 Dec, 2017	3.30.230.70	Assigned
5okzg00	10 Dec, 2017	3.30.230.70	Assigned
5okzG01	10 Dec, 2017	2.40.50.100	Assigned
5okzG02	10 Dec, 2017	2.40.50.140	Assigned
5okzG03	10 Dec, 2017	3.30.1370.10	Assigned
5okzh00	10 Dec, 2017	3.30.230.70	Assigned
5okzH01	10 Dec, 2017	2.40.50.100	Assigned
5okzH02	10 Dec, 2017		Holding pen
5okzi00	10 Dec, 2017	3.30.230.70	Assigned
5okzj00	10 Dec, 2017	3.30.230.70	Assigned
5okzK00	10 Dec, 2017	3.30.230.70	Assigned
5okzk01	10 Dec, 2017	2.40.50.100	Assigned
5okzk02	10 Dec, 2017	2.40.50.140	Assigned
5okzk03	10 Dec, 2017	3.30.1370.10	Assigned
5okzL00	10 Dec, 2017	3.30.230.70	Assigned
5okzl01	10 Dec, 2017	2.40.50.100	Assigned
5okzl02	10 Dec, 2017		Holding pen
5okzM00	10 Dec, 2017	3.30.230.70	Assigned
5okzN00	10 Dec, 2017	3.30.230.70	Assigned
5okzO00	10 Dec, 2017	3.30.230.70	Assigned
5okzP00	10 Dec, 2017	3.30.230.70	Assigned
5okzQ01	10 Dec, 2017	2.40.50.100	Assigned
5okzQ02	10 Dec, 2017	2.40.50.140	Assigned
5okzQ03	10 Dec, 2017	3.30.1370.10	Assigned
5okzR01	10 Dec, 2017	2.40.50.100	Assigned
5okzR02	10 Dec, 2017		Holding pen
5okzU00	10 Dec, 2017	3.30.230.70	Assigned
5okzV00	10 Dec, 2017	3.30.230.70	Assigned
5okzW00	10 Dec, 2017	3.30.230.70	Assigned
5okzX00	10 Dec, 2017	3.30.230.70	Assigned
5okzY00	10 Dec, 2017	3.30.230.70	Assigned
5okzZ00	10 Dec, 2017	3.30.230.70	Assigned

UniProtKB Entries (36)

Accession	Gene ID	Taxon	Description
Q08285	RRP40_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP40
P48240	MTR3_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component MTR3
P53859	CSL4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component CSL4
P53859	CSL4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component CSL4
P46948	RRP41_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component SKI6
P46948	RRP41_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component SKI6
P53256	RRP46_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP46
P25359	RRP43_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP43
P38792	RRP4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP4
Q05636	RRP45_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP45
Q08285	RRP40_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP40
P46948	RRP41_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component SKI6
Q12277	RRP42_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP42
P38792	RRP4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP4
P53256	RRP46_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP46
P53256	RRP46_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP46
P25359	RRP43_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP43
P48240	MTR3_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component MTR3
P38792	RRP4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP4
Q05636	RRP45_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP45
Q12277	RRP42_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP42
P53859	CSL4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component CSL4
P46948	RRP41_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component SKI6
Q08285	RRP40_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP40
P25359	RRP43_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP43
Q08285	RRP40_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP40
Q12277	RRP42_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP42
P48240	MTR3_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component MTR3
P53256	RRP46_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP46
Q05636	RRP45_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP45
Q05636	RRP45_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP45
P53859	CSL4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component CSL4
P38792	RRP4_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP4
Q12277	RRP42_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP42
P48240	MTR3_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component MTR3
P25359	RRP43_YEAST	Saccharomyces cerevisiae S288C	Exosome complex component RRP43