PDB 5mqf
PDB Information
| PDB | 5MQF |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature
|
| Header | Splicing |
| Released | 2016-12-20 |
| Resolution | 5.900 |
| CATH Insert Date | 07 May, 2017 |
PDB Images (47)
5mqf
PDB 5mqf
5mqf2
PDB Chain 5mqf2
5mqf5
PDB Chain 5mqf5
5mqf6
PDB Chain 5mqf6
5mqfa
PDB Chain 5mqfa
5mqfA
PDB Chain 5mqfA
5mqfb
PDB Chain 5mqfb
5mqfB
PDB Chain 5mqfB
5mqfc
PDB Chain 5mqfc
5mqfC
PDB Chain 5mqfC
5mqfd
PDB Chain 5mqfd
5mqfD
PDB Chain 5mqfD
5mqfe
PDB Chain 5mqfe
5mqfE
PDB Chain 5mqfE
5mqff
PDB Chain 5mqff
5mqfF
PDB Chain 5mqfF
5mqfg
PDB Chain 5mqfg
5mqfG
PDB Chain 5mqfG
5mqfh
PDB Chain 5mqfh
5mqfH
PDB Chain 5mqfH
5mqfi
PDB Chain 5mqfi
5mqfI
PDB Chain 5mqfI
5mqfj
PDB Chain 5mqfj
5mqfJ
PDB Chain 5mqfJ
5mqfk
PDB Chain 5mqfk
5mqfK
PDB Chain 5mqfK
5mqfl
PDB Chain 5mqfl
5mqfL
PDB Chain 5mqfL
5mqfm
PDB Chain 5mqfm
5mqfM
PDB Chain 5mqfM
5mqfn
PDB Chain 5mqfn
5mqfN
PDB Chain 5mqfN
5mqfo
PDB Chain 5mqfo
5mqfO
PDB Chain 5mqfO
5mqfp
PDB Chain 5mqfp
5mqfP
PDB Chain 5mqfP
5mqfq
PDB Chain 5mqfq
5mqfQ
PDB Chain 5mqfQ
5mqfR
PDB Chain 5mqfR
5mqfS
PDB Chain 5mqfS
5mqfT
PDB Chain 5mqfT
5mqfU
PDB Chain 5mqfU
5mqfV
PDB Chain 5mqfV
5mqfW
PDB Chain 5mqfW
5mqfX
PDB Chain 5mqfX
5mqfY
PDB Chain 5mqfY
5mqfZ
PDB Chain 5mqfZ
PDB Prints
PDB Chains (46)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 2 | 08 May, 2017 | Rejected |
| 5 | 08 May, 2017 | Rejected |
| 6 | 08 May, 2017 | Rejected |
| a | 08 May, 2017 | Rejected |
| A | 08 May, 2017 | Rejected |
| b | 08 May, 2017 | Rejected |
| B | 08 May, 2017 | Rejected |
| c | 08 May, 2017 | Rejected |
| C | 08 May, 2017 | Rejected |
| d | 08 May, 2017 | Rejected |
| D | 08 May, 2017 | Rejected |
| e | 08 May, 2017 | Rejected |
| E | 08 May, 2017 | Rejected |
| f | 08 May, 2017 | Rejected |
| F | 08 May, 2017 | Rejected |
| g | 08 May, 2017 | Rejected |
| G | 08 May, 2017 | Rejected |
| h | 08 May, 2017 | Rejected |
| H | 08 May, 2017 | Rejected |
| i | 08 May, 2017 | Rejected |
| I | 08 May, 2017 | Rejected |
| j | 08 May, 2017 | Rejected |
| J | 08 May, 2017 | Rejected |
| k | 08 May, 2017 | Rejected |
| K | 08 May, 2017 | Rejected |
| l | 08 May, 2017 | Rejected |
| L | 08 May, 2017 | Rejected |
| m | 08 May, 2017 | Rejected |
| M | 08 May, 2017 | Rejected |
| n | 08 May, 2017 | Rejected |
| N | 08 May, 2017 | Rejected |
| o | 08 May, 2017 | Rejected |
| O | 08 May, 2017 | Rejected |
| p | 08 May, 2017 | Rejected |
| P | 08 May, 2017 | Rejected |
| q | 08 May, 2017 | Rejected |
| Q | 08 May, 2017 | Rejected |
| R | 08 May, 2017 | Rejected |
| S | 08 May, 2017 | Rejected |
| T | 08 May, 2017 | Rejected |
| U | 08 May, 2017 | Rejected |
| V | 08 May, 2017 | Rejected |
| W | 08 May, 2017 | Rejected |
| X | 08 May, 2017 | Rejected |
| Y | 08 May, 2017 | Rejected |
| Z | 08 May, 2017 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (35)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| O60306 | AQR_HUMAN | Homo sapiens | RNA helicase aquarius |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| P62304 | RUXE_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein E |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| P62316 | SMD2_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D2 |
| Q99459 | CDC5L_HUMAN | Homo sapiens | Cell division cycle 5-like protein |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| P14678 | RSMB_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein-associated proteins B and B' |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| P62308 | RUXG_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein G |
| Q14562 | DHX8_HUMAN | Homo sapiens | ATP-dependent RNA helicase DHX8 |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| O60508 | PRP17_HUMAN | Homo sapiens | Pre-mRNA-processing factor 17 |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| P08579 | RU2B_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein B'' |
| P09661 | RU2A_HUMAN | Homo sapiens | U2 small nuclear ribonucleoprotein A' |
| Q96DI7 | SNR40_HUMAN | Homo sapiens | U5 small nuclear ribonucleoprotein 40 kDa protein |
| P62314 | SMD1_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D1 |
| O43660 | PLRG1_HUMAN | Homo sapiens | Pleiotropic regulator 1 |
| P62318 | SMD3_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein Sm D3 |
| Q6P2Q9 | PRP8_HUMAN | Homo sapiens | Pre-mRNA-processing-splicing factor 8 |
| Q9NW64 | RBM22_HUMAN | Homo sapiens | Pre-mRNA-splicing factor RBM22 |
| Q9HCG8 | CWC22_HUMAN | Homo sapiens | Pre-mRNA-splicing factor CWC22 homolog |
| Q9BZJ0 | CRNL1_HUMAN | Homo sapiens | Crooked neck-like protein 1 |
| Q9UMS4 | PRP19_HUMAN | Homo sapiens | Pre-mRNA-processing factor 19 |
| Q9UNP9 | PPIE_HUMAN | Homo sapiens | Peptidyl-prolyl cis-trans isomerase E |
| Q15029 | U5S1_HUMAN | Homo sapiens | 116 kDa U5 small nuclear ribonucleoprotein component |
| Q9Y3C6 | PPIL1_HUMAN | Homo sapiens | Peptidyl-prolyl cis-trans isomerase-like 1 |
| P38919 | IF4A3_HUMAN | Homo sapiens | Eukaryotic initiation factor 4A-III |
| Q9HCS7 | SYF1_HUMAN | Homo sapiens | Pre-mRNA-splicing factor SYF1 |
| P62306 | RUXF_HUMAN | Homo sapiens | Small nuclear ribonucleoprotein F |
