PDB 5jpq
PDB Information
| PDB | 5JPQ |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Cell
|
| Header | Ribosome |
| Released | 2016-05-04 |
| Resolution | 7.300 |
| CATH Insert Date | 07 Aug, 2016 |
PDB Images (57)
5jpq
PDB 5jpq
5jpq0
PDB Chain 5jpq0
5jpq1
PDB Chain 5jpq1
5jpq2
PDB Chain 5jpq2
5jpq3
PDB Chain 5jpq3
5jpqa
PDB Chain 5jpqa
5jpqA
PDB Chain 5jpqA
5jpqb
PDB Chain 5jpqb
5jpqB
PDB Chain 5jpqB
5jpqc
PDB Chain 5jpqc
5jpqC
PDB Chain 5jpqC
5jpqd
PDB Chain 5jpqd
5jpqD
PDB Chain 5jpqD
5jpqe
PDB Chain 5jpqe
5jpqE
PDB Chain 5jpqE
5jpqf
PDB Chain 5jpqf
5jpqF
PDB Chain 5jpqF
5jpqg
PDB Chain 5jpqg
5jpqG
PDB Chain 5jpqG
5jpqh
PDB Chain 5jpqh
5jpqH
PDB Chain 5jpqH
5jpqi
PDB Chain 5jpqi
5jpqI
PDB Chain 5jpqI
5jpqj
PDB Chain 5jpqj
5jpqJ
PDB Chain 5jpqJ
5jpqk
PDB Chain 5jpqk
5jpqK
PDB Chain 5jpqK
5jpql
PDB Chain 5jpql
5jpqL
PDB Chain 5jpqL
5jpqm
PDB Chain 5jpqm
5jpqM
PDB Chain 5jpqM
5jpqn
PDB Chain 5jpqn
5jpqN
PDB Chain 5jpqN
5jpqo
PDB Chain 5jpqo
5jpqO
PDB Chain 5jpqO
5jpqp
PDB Chain 5jpqp
5jpqP
PDB Chain 5jpqP
5jpqq
PDB Chain 5jpqq
5jpqQ
PDB Chain 5jpqQ
5jpqr
PDB Chain 5jpqr
5jpqR
PDB Chain 5jpqR
5jpqs
PDB Chain 5jpqs
5jpqS
PDB Chain 5jpqS
5jpqt
PDB Chain 5jpqt
5jpqT
PDB Chain 5jpqT
5jpqu
PDB Chain 5jpqu
5jpqU
PDB Chain 5jpqU
5jpqv
PDB Chain 5jpqv
5jpqV
PDB Chain 5jpqV
5jpqw
PDB Chain 5jpqw
5jpqW
PDB Chain 5jpqW
5jpqx
PDB Chain 5jpqx
5jpqX
PDB Chain 5jpqX
5jpqy
PDB Chain 5jpqy
5jpqY
PDB Chain 5jpqY
5jpqz
PDB Chain 5jpqz
5jpqZ
PDB Chain 5jpqZ
PDB Prints
PDB Chains (56)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 0 | 08 Aug, 2016 | Rejected |
| 1 | 08 Aug, 2016 | Rejected |
| 2 | 08 Aug, 2016 | Rejected |
| 3 | 08 Aug, 2016 | Rejected |
| a | 08 Aug, 2016 | Rejected |
| A | 08 Aug, 2016 | Rejected |
| b | 08 Aug, 2016 | Rejected |
| B | 08 Aug, 2016 | Rejected |
| c | 08 Aug, 2016 | Rejected |
| C | 08 Aug, 2016 | Rejected |
| d | 08 Aug, 2016 | Rejected |
| D | 08 Aug, 2016 | Rejected |
| e | 08 Aug, 2016 | Rejected |
| E | 08 Aug, 2016 | Rejected |
| f | 08 Aug, 2016 | Rejected |
| F | 08 Aug, 2016 | Rejected |
| g | 08 Aug, 2016 | Rejected |
| G | 08 Aug, 2016 | Rejected |
| h | 08 Aug, 2016 | Rejected |
| H | 08 Aug, 2016 | Rejected |
| i | 08 Aug, 2016 | Rejected |
| I | 08 Aug, 2016 | Rejected |
| j | 08 Aug, 2016 | Rejected |
| J | 08 Aug, 2016 | Rejected |
| k | 08 Aug, 2016 | Rejected |
| K | 08 Aug, 2016 | Rejected |
| l | 08 Aug, 2016 | Rejected |
| L | 08 Aug, 2016 | Rejected |
| m | 08 Aug, 2016 | Rejected |
| M | 08 Aug, 2016 | Rejected |
| n | 08 Aug, 2016 | Rejected |
| N | 08 Aug, 2016 | Rejected |
| o | 08 Aug, 2016 | Rejected |
| O | 08 Aug, 2016 | Rejected |
| p | 08 Aug, 2016 | Rejected |
| P | 08 Aug, 2016 | Rejected |
| q | 08 Aug, 2016 | Rejected |
| Q | 08 Aug, 2016 | Rejected |
| r | 08 Aug, 2016 | Rejected |
| R | 08 Aug, 2016 | Rejected |
| s | 08 Aug, 2016 | Rejected |
| S | 08 Aug, 2016 | Rejected |
| t | 08 Aug, 2016 | Rejected |
| T | 08 Aug, 2016 | Rejected |
| u | 08 Aug, 2016 | Rejected |
| U | 08 Aug, 2016 | Rejected |
| v | 08 Aug, 2016 | Rejected |
| V | 08 Aug, 2016 | Rejected |
| w | 08 Aug, 2016 | Rejected |
| W | 08 Aug, 2016 | Rejected |
| x | 08 Aug, 2016 | Rejected |
| X | 08 Aug, 2016 | Rejected |
| y | 08 Aug, 2016 | Rejected |
| Y | 08 Aug, 2016 | Rejected |
| z | 08 Aug, 2016 | Rejected |
| Z | 08 Aug, 2016 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (33)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| G0S3V7 | G0S3V7_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | KRR1 small subunit processome component |
| G0S3V7 | G0S3V7_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | KRR1 small subunit processome component |
| P0C233 | RS4_TETTH | Tetrahymena thermophila | 40S ribosomal protein S4 |
| Q06287 | NEP1_YEAST | Saccharomyces cerevisiae S288C | Ribosomal RNA small subunit methyltransferase NEP1 |
| P0CX51 | RS16A_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S16-A |
| P0C0W1 | RS22A_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S22-A |
| Q22B78 | Q22B78_TETTS | Tetrahymena thermophila SB210 | 40S ribosomal protein S11, putative |
| G0S273 | G0S273_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | RNA cytidine acetyltransferase |
| P58032 | FLPA_SACS2 | Saccharolobus solfataricus P2 | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase |
| I7MAL3 | I7MAL3_TETTS | Tetrahymena thermophila SB210 | 40S ribosomal protein S24 |
| G0SDL4 | G0SDL4_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | Uncharacterized protein |
| G0SE90 | G0SE90_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | Putative U3 small nucleolar ribonucleoprotein |
| P06367 | RS14A_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S14-A |
| Q08965 | BMS1_YEAST | Saccharomyces cerevisiae S288C | Ribosome biogenesis protein BMS1 |
| Q06287 | NEP1_YEAST | Saccharomyces cerevisiae S288C | Ribosomal RNA small subunit methyltransferase NEP1 |
| Q06078 | UTP21_YEAST | Saccharomyces cerevisiae S288C | U3 small nucleolar RNA-associated protein 21 |
| Q06506 | RRP9_YEAST | Saccharomyces cerevisiae S288C | Ribosomal RNA-processing protein 9 |
| A0A0E3MJI1 | A0A0E3MJI1_SACSO | Saccharolobus solfataricus | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
| O13516 | RS9A_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S9-A |
| G0S5L1 | G0S5L1_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | Uncharacterized protein |
| P58032 | FLPA_SACS2 | Saccharolobus solfataricus P2 | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase |
| Q3E7X9 | RS28A_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S28-A |
| G0S7X0 | G0S7X0_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | Uncharacterized protein |
| Q22AV0 | Q22AV0_TETTS | Tetrahymena thermophila SB210 | 40S ribosomal protein S8 |
| G0S273 | G0S273_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | RNA cytidine acetyltransferase |
| G0SE30 | G0SE30_CHATD | Chaetomium thermophilum var. thermophilum DSM 1495 | Uncharacterized protein |
| P26783 | RS5_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S5 |
| Q08096 | RCL1_YEAST | Saccharomyces cerevisiae S288C | RNA 3'-terminal phosphate cyclase-like protein |
| A4VD76 | A4VD76_TETTS | Tetrahymena thermophila SB210 | 40S ribosomal protein S6 |
| P55858 | RL7A_SACS2 | Saccharolobus solfataricus P2 | 50S ribosomal protein L7Ae |
| A0A0E3MJI1 | A0A0E3MJI1_SACSO | Saccharolobus solfataricus | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
| P55858 | RL7A_SACS2 | Saccharolobus solfataricus P2 | 50S ribosomal protein L7Ae |
| P05756 | RS13_YEAST | Saccharomyces cerevisiae S288C | 40S ribosomal protein S13 |