PDB 5jk7

PDB Links
Overview

PDB Information

PDB	5JK7
Method	X-RAY DIFFRACTION
Host Organism	Insect cell expression vector pTIE1
Gene Source	Homo sapiens
Primary Citation	The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction. Wu, Y., Zhou, X., Barnes, C.O., DeLucia, M., Cohen, A.E., Gronenborn, A.M., Ahn, J., Calero, G. Nat.Struct.Mol.Biol.
Header	Viral Protein/Dna Binding Protein
Released	2016-04-26
Resolution	3.490
CATH Insert Date	16 Oct, 2016

PDB Images (23)

5jk7

PDB 5jk7

5jk7A

PDB Chain 5jk7A

5jk7B

PDB Chain 5jk7B

5jk7C

PDB Chain 5jk7C

5jk7D

PDB Chain 5jk7D

5jk7E

PDB Chain 5jk7E

5jk7F

PDB Chain 5jk7F

5jk7G

PDB Chain 5jk7G

5jk7H

PDB Chain 5jk7H

5jk7A01

CATH Domain 5jk7A01

5jk7A02

CATH Domain 5jk7A02

5jk7A03

CATH Domain 5jk7A03

5jk7A04

CATH Domain 5jk7A04

5jk7B01

CATH Domain 5jk7B01

5jk7B02

CATH Domain 5jk7B02

5jk7B03

CATH Domain 5jk7B03

5jk7B04

CATH Domain 5jk7B04

5jk7C00

CATH Domain 5jk7C00

5jk7D00

CATH Domain 5jk7D00

5jk7E00

CATH Domain 5jk7E00

5jk7F00

CATH Domain 5jk7F00

5jk7G00

CATH Domain 5jk7G00

5jk7H00

CATH Domain 5jk7H00

PDB Prints

PDB Chains (8)

Chain ID	Date inserted into CATH	CATH Status
A	17 Oct, 2016	Chopped
B	17 Oct, 2016	Chopped
C	17 Oct, 2016	Chopped
D	17 Oct, 2016	Chopped
E	17 Oct, 2016	Chopped
F	17 Oct, 2016	Chopped
G	17 Oct, 2016	Chopped
H	17 Oct, 2016	Chopped

CATH Domains (14)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5jk7A01	01 Dec, 2017	2.130.10.10	Assigned
5jk7A02	01 Dec, 2017	2.130.10.10	Assigned
5jk7A03	01 Dec, 2017	2.130.10.10	Assigned
5jk7A04	01 Dec, 2017	1.10.150.910	Assigned
5jk7B01	15 Feb, 2018	2.130.10.10	Assigned
5jk7B02	15 Feb, 2018	2.130.10.10	Assigned
5jk7B03	15 Feb, 2018	2.130.10.10	Assigned
5jk7B04	15 Feb, 2018	1.10.150.910	Assigned
5jk7C00	28 Mar, 2018	2.130.10.10	Assigned
5jk7D00	21 Oct, 2016	3.40.470.10	Assigned
5jk7E00	28 Mar, 2018	2.130.10.10	Assigned
5jk7F00	16 Feb, 2017	1.20.5.4730	Assigned
5jk7G00	22 Oct, 2016	3.40.470.10	Assigned
5jk7H00	16 Feb, 2017	1.20.5.4730	Assigned

UniProtKB Entries (8)

Accession	Gene ID	Taxon	Description
P13051	UNG_HUMAN	Homo sapiens	Uracil-DNA glycosylase
Q16531	DDB1_HUMAN	Homo sapiens	DNA damage-binding protein 1
Q9Y4B6	DCAF1_HUMAN	Homo sapiens	DDB1- and CUL4-associated factor 1
Q16531	DDB1_HUMAN	Homo sapiens	DNA damage-binding protein 1
P12520	VPR_HV1N5	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)	Protein Vpr
Q9Y4B6	DCAF1_HUMAN	Homo sapiens	DDB1- and CUL4-associated factor 1
P13051	UNG_HUMAN	Homo sapiens	Uracil-DNA glycosylase
P12520	VPR_HV1N5	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)	Protein Vpr