PDB 5jbh
PDB Information
| PDB | 5JBH |
| Method | ELECTRON MICROSCOPY |
| Host Organism | Escherichia coli |
| Gene Source | Pyrococcus abyssi GE5 |
| Primary Citation | Cryo-EM study of start codon selection during archaeal translation initiation.
Nat Commun
|
| Header | Transcription |
| Released | 2016-04-13 |
| Resolution | 5.340 |
| CATH Insert Date | 25 Dec, 2016 |
PDB Images (37)
5jbh
PDB 5jbh
5jbh0
PDB Chain 5jbh0
5jbh1
PDB Chain 5jbh1
5jbh2
PDB Chain 5jbh2
5jbh3
PDB Chain 5jbh3
5jbh4
PDB Chain 5jbh4
5jbh5
PDB Chain 5jbh5
5jbh6
PDB Chain 5jbh6
5jbh7
PDB Chain 5jbh7
5jbh8
PDB Chain 5jbh8
5jbh9
PDB Chain 5jbh9
5jbhA
PDB Chain 5jbhA
5jbhB
PDB Chain 5jbhB
5jbhC
PDB Chain 5jbhC
5jbhD
PDB Chain 5jbhD
5jbhE
PDB Chain 5jbhE
5jbhF
PDB Chain 5jbhF
5jbhG
PDB Chain 5jbhG
5jbhH
PDB Chain 5jbhH
5jbhI
PDB Chain 5jbhI
5jbhJ
PDB Chain 5jbhJ
5jbhK
PDB Chain 5jbhK
5jbhL
PDB Chain 5jbhL
5jbhM
PDB Chain 5jbhM
5jbhN
PDB Chain 5jbhN
5jbhO
PDB Chain 5jbhO
5jbhP
PDB Chain 5jbhP
5jbhQ
PDB Chain 5jbhQ
5jbhR
PDB Chain 5jbhR
5jbhS
PDB Chain 5jbhS
5jbhT
PDB Chain 5jbhT
5jbhU
PDB Chain 5jbhU
5jbhV
PDB Chain 5jbhV
5jbhW
PDB Chain 5jbhW
5jbhX
PDB Chain 5jbhX
5jbhY
PDB Chain 5jbhY
5jbhZ
PDB Chain 5jbhZ
PDB Prints
PDB Chains (36)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| 0 | 26 Dec, 2016 | Rejected |
| 1 | 26 Dec, 2016 | Rejected |
| 2 | 26 Dec, 2016 | Rejected |
| 3 | 26 Dec, 2016 | Rejected |
| 4 | 26 Dec, 2016 | Rejected |
| 5 | 26 Dec, 2016 | Rejected |
| 6 | 26 Dec, 2016 | Rejected |
| 7 | 26 Dec, 2016 | Rejected |
| 8 | 26 Dec, 2016 | Rejected |
| 9 | 26 Dec, 2016 | Rejected |
| A | 26 Dec, 2016 | Rejected |
| B | 26 Dec, 2016 | Rejected |
| C | 26 Dec, 2016 | Rejected |
| D | 26 Dec, 2016 | Rejected |
| E | 26 Dec, 2016 | Rejected |
| F | 26 Dec, 2016 | Rejected |
| G | 26 Dec, 2016 | Rejected |
| H | 26 Dec, 2016 | Rejected |
| I | 26 Dec, 2016 | Rejected |
| J | 26 Dec, 2016 | Rejected |
| K | 26 Dec, 2016 | Rejected |
| L | 26 Dec, 2016 | Rejected |
| M | 26 Dec, 2016 | Rejected |
| N | 26 Dec, 2016 | Rejected |
| O | 26 Dec, 2016 | Rejected |
| P | 26 Dec, 2016 | Rejected |
| Q | 26 Dec, 2016 | Rejected |
| R | 26 Dec, 2016 | Rejected |
| S | 26 Dec, 2016 | Rejected |
| T | 26 Dec, 2016 | Rejected |
| U | 26 Dec, 2016 | Rejected |
| V | 26 Dec, 2016 | Rejected |
| W | 26 Dec, 2016 | Rejected |
| X | 26 Dec, 2016 | Rejected |
| Y | 26 Dec, 2016 | Rejected |
| Z | 26 Dec, 2016 | Rejected |
CATH Domains (0)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|
UniProtKB Entries (29)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q97Z79 | IF2A_SACS2 | Saccharolobus solfataricus P2 | Translation initiation factor 2 subunit alpha |
| P62008 | RL7A_PYRAB | Pyrococcus abyssi GE5 | 50S ribosomal protein L7Ae |
| P61885 | RS10_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S10 |
| Q8U0M8 | RS7_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S7 |
| Q8U014 | RS8_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S8 |
| Q8U017 | RS5_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S5 |
| Q8TZD9 | RS15_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S15 |
| Q8U1Y5 | RS8E_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S8e |
| Q8U0U1 | RS17E_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S17e |
| Q8U002 | RS19_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S19 |
| Q8U004 | RS3_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S3 |
| Q9V138 | IF1A_PYRAB | Pyrococcus abyssi GE5 | Translation initiation factor 1A |
| Q8U443 | RS27A_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S27ae |
| Q980A5 | IF2G_SACS2 | Saccharolobus solfataricus P2 | Translation initiation factor 2 subunit gamma |
| Q8U474 | RS27_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S27e |
| Q8U013 | RS14Z_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S14 type Z |
| Q8U0E3 | RS11_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S11 |
| Q8U0E7 | RS9_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S9 |
| Q9V0G8 | RS19E_PYRAB | Pyrococcus abyssi GE5 | 30S ribosomal protein S19e |
| Q8U159 | RS28_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S28e |
| Q8U0E2 | RS13_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S13 |
| Q57902 | SUI1_METJA | Methanocaldococcus jannaschii DSM 2661 | Protein translation factor SUI1 homolog |
| Q97W59 | IF2B_SACS2 | Saccharolobus solfataricus P2 | Translation initiation factor 2 subunit beta |
| Q8U442 | RS24_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S24e |
| Q8U011 | RS4E_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S4e |
| Q8U008 | RS17_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S17 |
| Q8U0F0 | RS2_PYRFU | Pyrococcus furiosus DSM 3638 | 30S ribosomal protein S2 |
| P61994 | RS12_PYRAB | Pyrococcus abyssi GE5 | 30S ribosomal protein S12 |
| P61992 | RS4_PYRAB | Pyrococcus abyssi GE5 | 30S ribosomal protein S4 |
