PDB 5gap
PDB Information
| PDB | 5GAP |
| Method | ELECTRON MICROSCOPY |
| Host Organism | |
| Gene Source | |
| Primary Citation | Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 angstrom resolution.
Nature
|
| Header | Transcription |
| Released | 2015-12-15 |
| Resolution | 3.600 |
| CATH Insert Date | 10 Apr, 2016 |
PDB Images (19)
5gap
PDB 5gap
5gapA
PDB Chain 5gapA
5gapB
PDB Chain 5gapB
5gapD
PDB Chain 5gapD
5gapF
PDB Chain 5gapF
5gapG
PDB Chain 5gapG
5gapH
PDB Chain 5gapH
5gapJ
PDB Chain 5gapJ
5gapK
PDB Chain 5gapK
5gapU
PDB Chain 5gapU
5gapV
PDB Chain 5gapV
5gapW
PDB Chain 5gapW
5gapx
PDB Chain 5gapx
5gapB00
CATH Domain 5gapB00
5gapD00
CATH Domain 5gapD00
5gapF01
CATH Domain 5gapF01
5gapF02
CATH Domain 5gapF02
5gapF03
CATH Domain 5gapF03
5gapK00
CATH Domain 5gapK00
PDB Prints
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 11 Apr, 2016 | Domchop review |
| B | 11 Apr, 2016 | Chopped |
| D | 11 Apr, 2016 | Chopped |
| F | 11 Apr, 2016 | Chopped |
| G | 11 Apr, 2016 | Holding pen |
| H | 11 Apr, 2016 | Domchop review |
| J | 11 Apr, 2016 | Holding pen |
| K | 11 Apr, 2016 | Chopped |
| U | 11 Apr, 2016 | Rejected |
| V | 11 Apr, 2016 | Rejected |
| W | 11 Apr, 2016 | Rejected |
| x | 11 Apr, 2016 | Rejected |
CATH Domains (6)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5gapB00 | 29 Nov, 2016 | Write scan list | |
| 5gapD00 | 13 May, 2016 | 3.40.30.10 | Assigned |
| 5gapF01 | 09 May, 2018 | Holding pen | |
| 5gapF02 | 09 May, 2018 | Holding pen | |
| 5gapF03 | 09 May, 2018 | Holding pen | |
| 5gapK00 | 13 May, 2016 | 3.30.1330.30 | Assigned |
UniProtKB Entries (7)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P39990 | SNU13_YEAST | Saccharomyces cerevisiae S288C | 13 kDa ribonucleoprotein-associated protein |
| Q06819 | DIB1_YEAST | Saccharomyces cerevisiae S288C | Spliceosomal protein DIB1 |
| P33334 | PRP8_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 8 |
| P49704 | PRP31_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-processing factor 31 |
| P32639 | BRR2_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing helicase BRR2 |
| P20053 | PRP4_YEAST | Saccharomyces cerevisiae S288C | U4/U6 small nuclear ribonucleoprotein PRP4 |
| P19735 | PRP6_YEAST | Saccharomyces cerevisiae S288C | Pre-mRNA-splicing factor 6 |
