PDB 5d0k
PDB Information
| PDB | 5D0K |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli |
| Gene Source | Homo sapiens |
| Primary Citation | Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity.
Nat.Struct.Mol.Biol.
|
| Header | Ligase |
| Released | 2015-08-03 |
| Resolution | 2.650 |
| CATH Insert Date | 20 Dec, 2015 |
PDB Images (25)
5d0k
PDB 5d0k
5d0kA
PDB Chain 5d0kA
5d0kB
PDB Chain 5d0kB
5d0kC
PDB Chain 5d0kC
5d0kD
PDB Chain 5d0kD
5d0kE
PDB Chain 5d0kE
5d0kF
PDB Chain 5d0kF
5d0kG
PDB Chain 5d0kG
5d0kH
PDB Chain 5d0kH
5d0kI
PDB Chain 5d0kI
5d0kJ
PDB Chain 5d0kJ
5d0kK
PDB Chain 5d0kK
5d0kL
PDB Chain 5d0kL
5d0kA00
CATH Domain 5d0kA00
5d0kB00
CATH Domain 5d0kB00
5d0kC00
CATH Domain 5d0kC00
5d0kD00
CATH Domain 5d0kD00
5d0kE00
CATH Domain 5d0kE00
5d0kF00
CATH Domain 5d0kF00
5d0kG00
CATH Domain 5d0kG00
5d0kH00
CATH Domain 5d0kH00
5d0kI00
CATH Domain 5d0kI00
5d0kJ00
CATH Domain 5d0kJ00
5d0kK00
CATH Domain 5d0kK00
5d0kL00
CATH Domain 5d0kL00
PDB Prints
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 21 Dec, 2015 | Chopped |
| B | 21 Dec, 2015 | Chopped |
| C | 21 Dec, 2015 | Chopped |
| D | 21 Dec, 2015 | Chopped |
| E | 21 Dec, 2015 | Chopped |
| F | 21 Dec, 2015 | Chopped |
| G | 21 Dec, 2015 | Chopped |
| H | 21 Dec, 2015 | Chopped |
| I | 21 Dec, 2015 | Chopped |
| J | 21 Dec, 2015 | Chopped |
| K | 21 Dec, 2015 | Chopped |
| L | 21 Dec, 2015 | Chopped |
CATH Domains (12)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5d0kA00 | 05 Jan, 2016 | 3.10.110.10 | Assigned |
| 5d0kB00 | 05 Jan, 2016 | Holding pen | |
| 5d0kC00 | 30 Nov, 2016 | Holding pen | |
| 5d0kD00 | 05 Jan, 2016 | 3.10.110.10 | Assigned |
| 5d0kE00 | 05 Jan, 2016 | Holding pen | |
| 5d0kF00 | 30 Nov, 2016 | Holding pen | |
| 5d0kG00 | 05 Jan, 2016 | 3.10.110.10 | Assigned |
| 5d0kH00 | 05 Jan, 2016 | Holding pen | |
| 5d0kI00 | 30 Nov, 2016 | Write scan list | |
| 5d0kJ00 | 05 Jan, 2016 | 3.10.110.10 | Assigned |
| 5d0kK00 | 05 Jan, 2016 | Holding pen | |
| 5d0kL00 | 30 Nov, 2016 | Holding pen |
UniProtKB Entries (12)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P62837 | UB2D2_HUMAN | Homo sapiens | Ubiquitin-conjugating enzyme E2 D2 |
| P0CG47 | UBB_HUMAN | Homo sapiens | Polyubiquitin-B |
| Q6ZSG1 | RN165_HUMAN | Homo sapiens | E3 ubiquitin-protein ligase RNF165 |
| Q6ZSG1 | RN165_HUMAN | Homo sapiens | E3 ubiquitin-protein ligase RNF165 |
| P0CG47 | UBB_HUMAN | Homo sapiens | Polyubiquitin-B |
| P0CG47 | UBB_HUMAN | Homo sapiens | Polyubiquitin-B |
| P62837 | UB2D2_HUMAN | Homo sapiens | Ubiquitin-conjugating enzyme E2 D2 |
| P0CG47 | UBB_HUMAN | Homo sapiens | Polyubiquitin-B |
| Q6ZSG1 | RN165_HUMAN | Homo sapiens | E3 ubiquitin-protein ligase RNF165 |
| Q6ZSG1 | RN165_HUMAN | Homo sapiens | E3 ubiquitin-protein ligase RNF165 |
| P62837 | UB2D2_HUMAN | Homo sapiens | Ubiquitin-conjugating enzyme E2 D2 |
| P62837 | UB2D2_HUMAN | Homo sapiens | Ubiquitin-conjugating enzyme E2 D2 |
