PDB 5c0x

PDB Information

PDB5C0X
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli BL21(DE3)
Gene SourceSaccharomyces cerevisiae S288c
Primary Citation
RNA degradation paths in a 12-subunit nuclear exosome complex.
Makino, D.L., Schuch, B., Stegmann, E., Baumgartner, M., Basquin, C., Conti, E.
Nature
HeaderHydrolase/Rna
Released2015-06-12
Resolution3.810
CATH Insert Date16 Aug, 2015

PDB Images (32)

PDB Prints

PDB Chains (12)

Chain ID Date inserted into CATH CATH Status
A 17 Aug, 2015 Chopped
B 17 Aug, 2015 Chopped
C 17 Aug, 2015 Chopped
D 17 Aug, 2015 Chopped
E 17 Aug, 2015 Chopped
F 17 Aug, 2015 Chopped
G 17 Aug, 2015 Chopped
H 17 Aug, 2015 Chopped
I 17 Aug, 2015 Chopped
J 17 Aug, 2015 Chopped
K 17 Aug, 2015 Chopped
R 17 Aug, 2015 Rejected

CATH Domains (19)

Domain ID Date inserted into CATH Superfamily CATH Status
5c0xA00 24 Aug, 2015 3.30.230.70 Assigned
5c0xB00 24 Aug, 2015 3.30.230.70 Assigned
5c0xC00 24 Aug, 2015 3.30.230.70 Assigned
5c0xD00 24 Aug, 2015 3.30.230.70 Assigned
5c0xE00 24 Aug, 2015 3.30.230.70 Assigned
5c0xF00 24 Aug, 2015 3.30.230.70 Assigned
5c0xG01 24 Aug, 2015 2.40.50.100 Assigned
5c0xG02 24 Aug, 2015 2.40.50.140 Assigned
5c0xG03 24 Aug, 2015 3.30.1370.10 Assigned
5c0xH01 24 Aug, 2015 2.40.50.100 Assigned
5c0xH02 24 Aug, 2015 Holding pen
5c0xI01 24 Aug, 2015 2.40.50.880 Assigned
5c0xI02 24 Aug, 2015 2.40.50.140 Assigned
5c0xJ01 24 Aug, 2015 Holding pen
5c0xJ02 24 Aug, 2015 Holding pen
5c0xJ03 24 Aug, 2015 2.40.50.700 Assigned
5c0xJ04 24 Aug, 2015 Holding pen
5c0xJ05 24 Aug, 2015 2.40.50.140 Assigned
5c0xK01 16 Jan, 2018 3.30.420.10 Assigned

UniProtKB Entries (11)

Accession Gene ID Taxon Description
P25359 RRP43_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP43
Q08285 RRP40_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP40
Q12149 RRP6_YEAST Saccharomyces cerevisiae S288C Exosome complex exonuclease RRP6
P38792 RRP4_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP4
Q05636 RRP45_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP45
Q12277 RRP42_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP42
P48240 MTR3_YEAST Saccharomyces cerevisiae S288C Exosome complex component MTR3
Q08162 RRP44_YEAST Saccharomyces cerevisiae S288C Exosome complex exonuclease DIS3
P53859 CSL4_YEAST Saccharomyces cerevisiae S288C Exosome complex component CSL4
P46948 RRP41_YEAST Saccharomyces cerevisiae S288C Exosome complex component SKI6
P53256 RRP46_YEAST Saccharomyces cerevisiae S288C Exosome complex component RRP46