PDB 5b1b

PDB Links
Overview

PDB Information

PDB	5B1B
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	The Mg2+-containing Water Cluster of Mammalian Cytochrome c Oxidase Collects Four Pumping Proton Equivalents in Each Catalytic Cycle. Yano, N., Muramoto, K., Shimada, A., Takemura, S., Baba, J., Fujisawa, H., Mochizuki, M., Shinzawa-Itoh, K., Yamashita, E., Tsukihara, T., Yoshikawa, S. J.Biol.Chem.
Header	Oxidoreductase
Released	2015-12-01
Resolution	1.600
CATH Insert Date	09 Oct, 2016

PDB Images (57)

5b1b

PDB 5b1b

5b1bA

PDB Chain 5b1bA

5b1bB

PDB Chain 5b1bB

5b1bC

PDB Chain 5b1bC

5b1bD

PDB Chain 5b1bD

5b1bE

PDB Chain 5b1bE

5b1bF

PDB Chain 5b1bF

5b1bG

PDB Chain 5b1bG

5b1bH

PDB Chain 5b1bH

5b1bI

PDB Chain 5b1bI

5b1bJ

PDB Chain 5b1bJ

5b1bK

PDB Chain 5b1bK

5b1bL

PDB Chain 5b1bL

5b1bM

PDB Chain 5b1bM

5b1bN

PDB Chain 5b1bN

5b1bO

PDB Chain 5b1bO

5b1bP

PDB Chain 5b1bP

5b1bQ

PDB Chain 5b1bQ

5b1bR

PDB Chain 5b1bR

5b1bS

PDB Chain 5b1bS

5b1bT

PDB Chain 5b1bT

5b1bU

PDB Chain 5b1bU

5b1bV

PDB Chain 5b1bV

5b1bW

PDB Chain 5b1bW

5b1bX

PDB Chain 5b1bX

5b1bY

PDB Chain 5b1bY

5b1bZ

PDB Chain 5b1bZ

5b1bA00

CATH Domain 5b1bA00

5b1bB01

CATH Domain 5b1bB01

5b1bB02

CATH Domain 5b1bB02

5b1bC01

CATH Domain 5b1bC01

5b1bC02

CATH Domain 5b1bC02

5b1bD00

CATH Domain 5b1bD00

5b1bE00

CATH Domain 5b1bE00

5b1bF00

CATH Domain 5b1bF00

5b1bG00

CATH Domain 5b1bG00

5b1bH00

CATH Domain 5b1bH00

5b1bI00

CATH Domain 5b1bI00

5b1bJ00

CATH Domain 5b1bJ00

5b1bK00

CATH Domain 5b1bK00

5b1bL00

CATH Domain 5b1bL00

5b1bM00

CATH Domain 5b1bM00

5b1bN00

CATH Domain 5b1bN00

5b1bO01

CATH Domain 5b1bO01

5b1bO02

CATH Domain 5b1bO02

5b1bP01

CATH Domain 5b1bP01

5b1bP02

CATH Domain 5b1bP02

5b1bQ00

CATH Domain 5b1bQ00

5b1bR00

CATH Domain 5b1bR00

5b1bS00

CATH Domain 5b1bS00

5b1bT00

CATH Domain 5b1bT00

5b1bU00

CATH Domain 5b1bU00

5b1bV00

CATH Domain 5b1bV00

5b1bW00

CATH Domain 5b1bW00

5b1bX00

CATH Domain 5b1bX00

5b1bY00

CATH Domain 5b1bY00

5b1bZ00

CATH Domain 5b1bZ00

PDB Prints

PDB Chains (26)

Chain ID	Date inserted into CATH	CATH Status
A	10 Oct, 2016	Chopped
B	10 Oct, 2016	Chopped
C	10 Oct, 2016	Chopped
D	10 Oct, 2016	Chopped
E	10 Oct, 2016	Chopped
F	10 Oct, 2016	Chopped
G	10 Oct, 2016	Chopped
H	10 Oct, 2016	Chopped
I	10 Oct, 2016	Chopped
J	10 Oct, 2016	Chopped
K	10 Oct, 2016	Chopped
L	10 Oct, 2016	Chopped
M	10 Oct, 2016	Chopped
N	10 Oct, 2016	Chopped
O	10 Oct, 2016	Chopped
P	10 Oct, 2016	Chopped
Q	10 Oct, 2016	Chopped
R	10 Oct, 2016	Chopped
S	10 Oct, 2016	Chopped
T	10 Oct, 2016	Chopped
U	10 Oct, 2016	Chopped
V	10 Oct, 2016	Chopped
W	10 Oct, 2016	Chopped
X	10 Oct, 2016	Chopped
Y	10 Oct, 2016	Chopped
Z	10 Oct, 2016	Chopped

CATH Domains (30)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5b1bA00	15 Oct, 2016	1.20.210.10	Assigned
5b1bB01	14 Oct, 2016	1.10.287.90	Assigned
5b1bB02	14 Oct, 2016	2.60.40.420	Assigned
5b1bC01	14 Oct, 2016	1.10.287.70	Assigned
5b1bC02	14 Oct, 2016	1.20.120.80	Assigned
5b1bD00	14 Oct, 2016	1.10.442.10	Assigned
5b1bE00	15 Oct, 2016	1.25.40.40	Assigned
5b1bF00	14 Oct, 2016	2.60.11.10	Assigned
5b1bG00	15 Oct, 2016	4.10.95.10	Assigned
5b1bH00	14 Oct, 2016	1.10.10.140	Assigned
5b1bI00	15 Oct, 2016	4.10.93.10	Assigned
5b1bJ00	15 Oct, 2016	4.10.91.10	Assigned
5b1bK00	15 Oct, 2016	4.10.51.10	Assigned
5b1bL00	15 Oct, 2016	4.10.49.10	Assigned
5b1bM00	15 Oct, 2016	4.10.81.10	Assigned
5b1bN00	13 Oct, 2016	1.20.210.10	Assigned
5b1bO01	13 Oct, 2016	1.10.287.90	Assigned
5b1bO02	13 Oct, 2016	2.60.40.420	Assigned
5b1bP01	15 Oct, 2016	1.10.287.70	Assigned
5b1bP02	15 Oct, 2016	1.20.120.80	Assigned
5b1bQ00	15 Oct, 2016	1.10.442.10	Assigned
5b1bR00	14 Oct, 2016	1.25.40.40	Assigned
5b1bS00	15 Oct, 2016	2.60.11.10	Assigned
5b1bT00	14 Oct, 2016	4.10.95.10	Assigned
5b1bU00	15 Oct, 2016	1.10.10.140	Assigned
5b1bV00	14 Oct, 2016	4.10.93.10	Assigned
5b1bW00	14 Oct, 2016	4.10.91.10	Assigned
5b1bX00	14 Oct, 2016	4.10.51.10	Assigned
5b1bY00	14 Oct, 2016	4.10.49.10	Assigned
5b1bZ00	14 Oct, 2016	4.10.81.10	Assigned

UniProtKB Entries (26)

Accession	Gene ID	Taxon	Description
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial