PDB 4ub8

PDB Information

PDB4UB8
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Native structure of photosystem II at 1.95 angstrom resolution viewed by femtosecond X-ray pulses.
Suga, M., Akita, F., Hirata, K., Ueno, G., Murakami, H., Nakajima, Y., Shimizu, T., Yamashita, K., Yamamoto, M., Ago, H., Shen, J.R.
Nature
HeaderElectron Transport, Photosynthesis
Released2014-08-12
Resolution1.950
CATH Insert Date21 Dec, 2014

PDB Images (66)

PDB Prints

PDB Chains (39)

Chain ID Date inserted into CATH CATH Status
a 22 Dec, 2014 Chopped
A 22 Dec, 2014 Chopped
b 22 Dec, 2014 Chopped
B 22 Dec, 2014 Chopped
c 22 Dec, 2014 Chopped
C 22 Dec, 2014 Chopped
d 22 Dec, 2014 Chopped
D 22 Dec, 2014 Chopped
e 22 Dec, 2014 Chopped
E 22 Dec, 2014 Chopped
f 22 Dec, 2014 Rejected
F 22 Dec, 2014 Rejected
h 22 Dec, 2014 Chopped
H 22 Dec, 2014 Chopped
i 22 Dec, 2014 Rejected
I 22 Dec, 2014 Rejected
j 22 Dec, 2014 Rejected
J 22 Dec, 2014 Rejected
k 22 Dec, 2014 Rejected
K 22 Dec, 2014 Rejected
l 22 Dec, 2014 Rejected
L 22 Dec, 2014 Rejected
m 22 Dec, 2014 Rejected
M 22 Dec, 2014 Rejected
o 22 Dec, 2014 Chopped
O 22 Dec, 2014 Chopped
R 22 Dec, 2014 Rejected
t 22 Dec, 2014 Rejected
T 22 Dec, 2014 Rejected
u 22 Dec, 2014 Chopped
U 22 Dec, 2014 Chopped
v 22 Dec, 2014 Chopped
V 22 Dec, 2014 Chopped
x 22 Dec, 2014 Rejected
X 22 Dec, 2014 Rejected
y 22 Dec, 2014 Rejected
Y 22 Dec, 2014 Rejected
z 22 Dec, 2014 Chopped
Z 22 Dec, 2014 Chopped

CATH Domains (26)

Domain ID Date inserted into CATH Superfamily CATH Status
4ub8a00 28 Dec, 2014 Holding pen
4ub8A00 28 Dec, 2014 Holding pen
4ub8b01 29 Dec, 2014 Holding pen
4ub8B01 29 Dec, 2014 Holding pen
4ub8b02 29 Dec, 2014 3.10.680.10 Assigned
4ub8B02 29 Dec, 2014 3.10.680.10 Assigned
4ub8c01 28 Dec, 2014 Holding pen
4ub8C01 29 Dec, 2014 Holding pen
4ub8c02 28 Dec, 2014 1.10.10.670 Assigned
4ub8C02 29 Dec, 2014 1.10.10.670 Assigned
4ub8d00 29 Dec, 2014 Holding pen
4ub8D00 29 Dec, 2014 Holding pen
4ub8e00 29 Dec, 2014 1.20.5.860 Assigned
4ub8E00 28 Dec, 2014 1.20.5.860 Assigned
4ub8h01 29 Dec, 2014 1.20.5.880 Assigned
4ub8H01 29 Dec, 2014 1.20.5.880 Assigned
4ub8o01 28 Dec, 2014 2.40.160.30 Assigned
4ub8O01 29 Dec, 2014 2.40.160.30 Assigned
4ub8o02 28 Dec, 2014 3.30.2050.10 Assigned
4ub8O02 29 Dec, 2014 3.30.2050.10 Assigned
4ub8u01 29 Dec, 2014 1.10.150.320 Assigned
4ub8U01 29 Dec, 2014 1.10.150.320 Assigned
4ub8v00 28 Dec, 2014 1.10.760.10 Assigned
4ub8V00 28 Dec, 2014 1.10.760.10 Assigned
4ub8z00 28 Dec, 2014 1.10.287.740 Assigned
4ub8Z00 29 Dec, 2014 1.10.287.740 Assigned

UniProtKB Entries (24)

Accession Gene ID Taxon Description
D0VWR4 PSBX_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein X
P0A387 CY550_THEVL Thermosynechococcus vulcanus Cytochrome c-550
D0VWR8 PSBD_THEVL Thermosynechococcus vulcanus Photosystem II D2 protein
P12238 PSBE_THEVL Thermosynechococcus vulcanus Cytochrome b559 subunit alpha
D0VWR2 PSBO_THEVL Thermosynechococcus vulcanus Photosystem II manganese-stabilizing polypeptide
P51765 PSBA_THEVL Thermosynechococcus vulcanus Photosystem II protein D1
Q7DGD4 PSBJ_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein J
P56152 PSBU_THEVL Thermosynechococcus vulcanus Photosystem II 12 kDa extrinsic protein
D0VWR7 PSBC_THEVL Thermosynechococcus vulcanus Photosystem II CP43 reaction center protein
D0VWR7 PSBC_THEVL Thermosynechococcus vulcanus Photosystem II CP43 reaction center protein
Q7DGD4 PSBJ_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein J
P19052 PSBH_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein H
D0VWR5 PSBZ_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein Z
D0VWR1 PSBB_THEVL Thermosynechococcus vulcanus Photosystem II CP47 reaction center protein
D0VWR4 PSBX_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein X
D0VWR2 PSBO_THEVL Thermosynechococcus vulcanus Photosystem II manganese-stabilizing polypeptide
P51765 PSBA_THEVL Thermosynechococcus vulcanus Photosystem II protein D1
P19052 PSBH_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein H
D0VWR1 PSBB_THEVL Thermosynechococcus vulcanus Photosystem II CP47 reaction center protein
P12238 PSBE_THEVL Thermosynechococcus vulcanus Cytochrome b559 subunit alpha
P56152 PSBU_THEVL Thermosynechococcus vulcanus Photosystem II 12 kDa extrinsic protein
D0VWR5 PSBZ_THEVL Thermosynechococcus vulcanus Photosystem II reaction center protein Z
D0VWR8 PSBD_THEVL Thermosynechococcus vulcanus Photosystem II D2 protein
P0A387 CY550_THEVL Thermosynechococcus vulcanus Cytochrome c-550