PDB 4gdk

PDB Information

PDB4GDK
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceHomo sapiens
Primary Citation
Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy.
Otomo, C., Metlagel, Z., Takaesu, G., Otomo, T.
Nat.Struct.Mol.Biol.
HeaderProtein Binding
Released2012-07-31
Resolution2.700
CATH Insert Date30 Dec, 2012

PDB Images (15)

PDB Prints

PDB Chains (6)

Chain ID Date inserted into CATH CATH Status
A 31 Dec, 2012 Chopped
B 31 Dec, 2012 Chopped
C 31 Dec, 2012 Rejected
D 31 Dec, 2012 Chopped
E 31 Dec, 2012 Chopped
F 31 Dec, 2012 Rejected

CATH Domains (8)

Domain ID Date inserted into CATH Superfamily CATH Status
4gdkA00 18 Mar, 2013 3.10.20.90 Assigned
4gdkB01 21 Oct, 2013 3.10.20.90 Assigned
4gdkB02 21 Oct, 2013 3.10.20.620 Assigned
4gdkB03 21 Oct, 2013 1.10.246.190 Assigned
4gdkD00 18 Mar, 2013 3.10.20.90 Assigned
4gdkE01 22 Oct, 2013 3.10.20.90 Assigned
4gdkE02 22 Oct, 2013 3.10.20.620 Assigned
4gdkE03 22 Oct, 2013 1.10.246.190 Assigned

UniProtKB Entries (6)

Accession Gene ID Taxon Description
Q9H1Y0 ATG5_HUMAN Homo sapiens Autophagy protein 5
O94817 ATG12_HUMAN Homo sapiens Ubiquitin-like protein ATG12
Q676U5 A16L1_HUMAN Homo sapiens Autophagy-related protein 16-1
Q9H1Y0 ATG5_HUMAN Homo sapiens Autophagy protein 5
Q676U5 A16L1_HUMAN Homo sapiens Autophagy-related protein 16-1
O94817 ATG12_HUMAN Homo sapiens Ubiquitin-like protein ATG12
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