PDB Information

PDB3JCM
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
The 3.8 angstrom structure of the U4/U6.U5 tri-snRNP: Insights into spliceosome assembly and catalysis
Wan, R., Yan, C., Bai, R., Wang, L., Huang, M., Wong, C.C., Shi, Y.
Science
HeaderTranscription
Released2015-12-23
Resolution3.800
CATH Insert Date10 Apr, 2016

PDB Images (82)

PDB Prints

PDB Chains (34)

Chain ID Date inserted into CATH CATH Status
a 11 Apr, 2016 Chopped
A 11 Apr, 2016 Holding pen
b 11 Apr, 2016 Chopped
B 11 Apr, 2016 Chopped
c 11 Apr, 2016 Chopped
C 11 Apr, 2016 Rejected
d 11 Apr, 2016 Chopped
D 11 Apr, 2016 Rejected
e 11 Apr, 2016 Chopped
E 11 Apr, 2016 Rejected
f 11 Apr, 2016 Chopped
F 11 Apr, 2016 Rejected
g 11 Apr, 2016 Chopped
G 11 Apr, 2016 Chopped
h 11 Apr, 2016 Chopped
H 11 Apr, 2016 Chopped
I 11 Apr, 2016 Chopped
J 11 Apr, 2016 Chopped
K 11 Apr, 2016 Domchop review
L 11 Apr, 2016 Chopped
M 11 Apr, 2016 Chopped
N 11 Apr, 2016 Chopped
O 11 Apr, 2016 Chopped
P 11 Apr, 2016 Chopped
Q 11 Apr, 2016 Chopped
R 11 Apr, 2016 Chopped
S 11 Apr, 2016 Chopped
T 11 Apr, 2016 Chopped
U 11 Apr, 2016 Chopped
V 11 Apr, 2016 Chopped
W 11 Apr, 2016 Chopped
X 11 Apr, 2016 Chopped
Y 11 Apr, 2016 Chopped
Z 11 Apr, 2016 Chopped

CATH Domains (47)

Domain ID Date inserted into CATH Superfamily CATH Status
3jcma00 28 Apr, 2016 2.30.30.100 Assigned
3jcmb00 28 Apr, 2016 2.30.30.100 Assigned
3jcmB01 07 Mar, 2018 Write scan list
3jcmB02 07 Mar, 2018 Write scan list
3jcmc00 28 Apr, 2016 2.30.30.100 Assigned
3jcmd00 28 Apr, 2016 2.30.30.100 Assigned
3jcme00 28 Apr, 2016 2.30.30.100 Assigned
3jcmf00 28 Apr, 2016 2.30.30.100 Assigned
3jcmg00 28 Apr, 2016 2.30.30.100 Assigned
3jcmG01 25 Jun, 2018 Write scan list
3jcmh00 28 Apr, 2016 2.30.30.100 Assigned
3jcmH01 21 Feb, 2018 Write scan list
3jcmH02 21 Feb, 2018 Write scan list
3jcmH03 21 Feb, 2018 Write scan list
3jcmH04 21 Feb, 2018 3.30.70.870 Assigned
3jcmH05 21 Feb, 2018 Write scan list
3jcmH06 21 Feb, 2018 Write scan list
3jcmI01 09 May, 2018 Holding pen
3jcmI02 09 May, 2018 Holding pen
3jcmI03 09 May, 2018 Holding pen
3jcmJ00 28 Apr, 2016 2.30.30.100 Assigned
3jcmL00 28 Apr, 2016 3.40.30.10 Assigned
3jcmM00 28 Apr, 2016 3.30.1330.30 Assigned
3jcmN01 31 May, 2018 3.40.50.300 Assigned
3jcmN02 31 May, 2018 3.40.50.300 Assigned
3jcmN03 31 May, 2018 1.10.10.10 Assigned
3jcmN04 31 May, 2018 1.10.3380.10 Assigned
3jcmN05 31 May, 2018 1.10.150.20 Assigned
3jcmN06 31 May, 2018 2.60.40.150 Assigned
3jcmN07 31 May, 2018 3.40.50.300 Assigned
3jcmN08 31 May, 2018 3.40.50.300 Assigned
3jcmN09 31 May, 2018 1.10.10.10 Assigned
3jcmN10 31 May, 2018 1.10.3380.10 Assigned
3jcmN11 31 May, 2018 1.10.150.20 Assigned
3jcmN12 31 May, 2018 2.60.40.150 Assigned
3jcmO00 30 Nov, 2016 Holding pen
3jcmP00 28 Apr, 2016 2.30.30.100 Assigned
3jcmQ00 28 Apr, 2016 2.30.30.100 Assigned
3jcmR00 28 Apr, 2016 2.30.30.100 Assigned
3jcmS00 30 Nov, 2016 Holding pen
3jcmT00 28 Apr, 2016 2.30.30.100 Assigned
3jcmU00 28 Apr, 2016 2.30.30.100 Assigned
3jcmV00 28 Apr, 2016 2.30.30.100 Assigned
3jcmW00 28 Apr, 2016 2.30.30.100 Assigned
3jcmX00 28 Apr, 2016 2.30.30.100 Assigned
3jcmY00 28 Apr, 2016 2.30.30.100 Assigned
3jcmZ00 28 Apr, 2016 2.30.30.100 Assigned

UniProtKB Entries (29)

Accession Gene ID Taxon Description
Q02260 SMD1_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D1
Q06406 LSM6_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm6
Q06217 SMD2_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D2
P33334 PRP8_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor 8
P38203 LSM2_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm2
P32639 BRR2_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing helicase BRR2
P49704 PRP31_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-processing factor 31
P36048 SN114_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor SNU114
Q06217 SMD2_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D2
P57743 LSM3_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm3
P19735 PRP6_YEAST Saccharomyces cerevisiae S288C Pre-mRNA-splicing factor 6
P40204 RUXG_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein G
P40018 RSMB_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein-associated protein B
P43321 SMD3_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D3
P40089 LSM5_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm5
P40070 LSM4_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm4
P20053 PRP4_YEAST Saccharomyces cerevisiae S288C U4/U6 small nuclear ribonucleoprotein PRP4
P39990 SNU13_YEAST Saccharomyces cerevisiae S288C 13 kDa ribonucleoprotein-associated protein
P43321 SMD3_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D3
P53905 LSM7_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm7
Q02260 SMD1_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein Sm D1
P54999 RUXF_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein F
P40018 RSMB_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein-associated protein B
P47093 LSM8_YEAST Saccharomyces cerevisiae S288C U6 snRNA-associated Sm-like protein LSm8
Q12330 RUXE_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein E
P54999 RUXF_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein F
Q06819 DIB1_YEAST Saccharomyces cerevisiae S288C Spliceosomal protein DIB1
P40204 RUXG_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein G
Q12330 RUXE_YEAST Saccharomyces cerevisiae S288C Small nuclear ribonucleoprotein E