# STOCKHOLM 1.0 #=GF ID 4.10.1000.40/FF/000003 #=GF DE Nuclear polyadenylated RNA-binding protein NAB2 #=GF AC 4.10.1000.40/FF/000003 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 86.365 #=GS 5l2lF00/1-77 AC P32505 #=GS 5l2lF00/1-77 OS Saccharomyces cerevisiae S288C #=GS 5l2lF00/1-77 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS 5l2lF00/1-77 DR CATH; 5l2l; F:407-481; #=GS 5l2lF00/1-77 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS 5l2lF00/1-77 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS Q95XU6/650-716 AC Q95XU6 #=GS Q95XU6/650-716 OS Caenorhabditis elegans #=GS Q95XU6/650-716 DE Zinc finger CCCH domain-containing protein 14 #=GS Q95XU6/650-716 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q95XU6/650-716 DR GO; GO:0005515; GO:0005634; GO:0005737; GO:0016607; GO:0048471; #=GS 5l2lE00/1-77 AC P32505 #=GS 5l2lE00/1-77 OS Saccharomyces cerevisiae S288C #=GS 5l2lE00/1-77 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS 5l2lE00/1-77 DR CATH; 5l2l; E:409-480; #=GS 5l2lE00/1-77 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS 5l2lE00/1-77 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS 5l2lB00/1-77 AC P32505 #=GS 5l2lB00/1-77 OS Saccharomyces cerevisiae S288C #=GS 5l2lB00/1-77 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS 5l2lB00/1-77 DR CATH; 5l2l; B:407-480; #=GS 5l2lB00/1-77 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS 5l2lB00/1-77 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS 5l2lA00/1-77 AC P32505 #=GS 5l2lA00/1-77 OS Saccharomyces cerevisiae S288C #=GS 5l2lA00/1-77 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS 5l2lA00/1-77 DR CATH; 5l2l; A:408-479; #=GS 5l2lA00/1-77 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS 5l2lA00/1-77 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS 2lhnA00/1-80 AC P32505 #=GS 2lhnA00/1-80 OS Saccharomyces cerevisiae S288C #=GS 2lhnA00/1-80 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS 2lhnA00/1-80 DR CATH; 2lhn; A:404-483; #=GS 2lhnA00/1-80 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS 2lhnA00/1-80 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS P32505/408-483 AC P32505 #=GS P32505/408-483 OS Saccharomyces cerevisiae S288C #=GS P32505/408-483 DE Nuclear polyadenylated RNA-binding protein NAB2 #=GS P32505/408-483 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P32505/408-483 DR GO; GO:0000049; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0006378; GO:0008097; GO:0008143; GO:0008312; GO:0016973; GO:0033204; GO:0043488; GO:0045945; GO:1900152; #=GS H3EWK1/722-777 AC H3EWK1 #=GS H3EWK1/722-777 OS Pristionchus pacificus #=GS H3EWK1/722-777 DE Uncharacterized protein #=GS H3EWK1/722-777 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A1D8NIF4/361-432 AC A0A1D8NIF4 #=GS A0A1D8NIF4/361-432 OS Yarrowia lipolytica #=GS A0A1D8NIF4/361-432 DE Uncharacterized protein #=GS A0A1D8NIF4/361-432 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS A0A1D8PCH2/327-401 AC A0A1D8PCH2 #=GS A0A1D8PCH2/327-401 OS Candida albicans SC5314 #=GS A0A1D8PCH2/327-401 DE mRNA-binding protein #=GS A0A1D8PCH2/327-401 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS Q75E99/362-438 AC Q75E99 #=GS Q75E99/362-438 OS Eremothecium gossypii ATCC 10895 #=GS Q75E99/362-438 DE AAR178Cp #=GS Q75E99/362-438 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9X8F3/363-439 AC R9X8F3 #=GS R9X8F3/363-439 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9X8F3/363-439 DE AaceriAAR178Cp #=GS R9X8F3/363-439 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS B9W6U1/327-401 AC B9W6U1 #=GS B9W6U1/327-401 OS Candida dubliniensis CD36 #=GS B9W6U1/327-401 DE Nuclear polyadenylated RNA-binding protein, putative #=GS B9W6U1/327-401 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS J5PV67/386-461 AC J5PV67 #=GS J5PV67/386-461 OS Saccharomyces kudriavzevii IFO 1802 #=GS J5PV67/386-461 DE NAB2-like protein #=GS J5PV67/386-461 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; #=GS J8LNV2/384-459 AC J8LNV2 #=GS J8LNV2/384-459 OS Saccharomyces arboricola H-6 #=GS J8LNV2/384-459 DE Nab2p #=GS J8LNV2/384-459 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; #=GS A0A0L8VQM3/380-455 AC A0A0L8VQM3 #=GS A0A0L8VQM3/380-455 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VQM3/380-455 DE NAB2p Nuclear polyadenylated RNA-binding protein #=GS A0A0L8VQM3/380-455 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS A0A0L8RIY6/395-470 AC A0A0L8RIY6 #=GS A0A0L8RIY6/395-470 OS Saccharomyces eubayanus #=GS A0A0L8RIY6/395-470 DE NAB2-like protein #=GS A0A0L8RIY6/395-470 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS H0GFV4/380-455 AC H0GFV4 #=GS H0GFV4/380-455 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GFV4/380-455 DE Nab2p #=GS H0GFV4/380-455 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A8WL05/639-700 AC A8WL05 #=GS A8WL05/639-700 OS Caenorhabditis briggsae #=GS A8WL05/639-700 DE Protein CBR-SUT-2 #=GS A8WL05/639-700 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5T8B3/640-700 AC A0A2G5T8B3 #=GS A0A2G5T8B3/640-700 OS Caenorhabditis nigoni #=GS A0A2G5T8B3/640-700 DE Uncharacterized protein #=GS A0A2G5T8B3/640-700 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A2A6CSF5/1096-1151 AC A0A2A6CSF5 #=GS A0A2A6CSF5/1096-1151 OS Pristionchus pacificus #=GS A0A2A6CSF5/1096-1151 DE Sut-2 #=GS A0A2A6CSF5/1096-1151 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS Q6C5Z5/361-432 AC Q6C5Z5 #=GS Q6C5Z5/361-432 OS Yarrowia lipolytica CLIB122 #=GS Q6C5Z5/361-432 DE YALI0E13794p #=GS Q6C5Z5/361-432 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS C4YFB6/327-401 AC C4YFB6 #=GS C4YFB6/327-401 OS Candida albicans WO-1 #=GS C4YFB6/327-401 DE Uncharacterized protein #=GS C4YFB6/327-401 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS N1P9P0/384-459 AC N1P9P0 #=GS N1P9P0/384-459 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P9P0/384-459 DE Nab2p #=GS N1P9P0/384-459 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8Z8C9/380-455 AC C8Z8C9 #=GS C8Z8C9/380-455 OS Saccharomyces cerevisiae EC1118 #=GS C8Z8C9/380-455 DE Nab2p #=GS C8Z8C9/380-455 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LHI2/380-455 AC B3LHI2 #=GS B3LHI2/380-455 OS Saccharomyces cerevisiae RM11-1a #=GS B3LHI2/380-455 DE Polyadenylated RNA binding protein #=GS B3LHI2/380-455 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZU60/396-471 AC A6ZU60 #=GS A6ZU60/396-471 OS Saccharomyces cerevisiae YJM789 #=GS A6ZU60/396-471 DE Polyadenylated RNA binding protein #=GS A6ZU60/396-471 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WDY0/387-462 AC G2WDY0 #=GS G2WDY0/387-462 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WDY0/387-462 DE K7_Nab2p #=GS G2WDY0/387-462 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF SQ 28 5l2lF00/1-77 ---GSEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK Q95XU6/650-716 --------------PKAEVAPVQPKPLPDIAPLHSMVLCRYAGACRNPICHFKHP--KECRFGANCRNPSCYFYHKPAGAAPT-- 5l2lE00/1-77 ---GSEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK 5l2lB00/1-77 ---GSEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK 5l2lA00/1-77 ---GSEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK 2lhnA00/1-80 GPLGSEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK P32505/408-483 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK H3EWK1/722-777 --------------------RAGVP-----STLMSSIPCRFAAGCTNPICTYKHP--KECRFGQNCKNAYCYFYHPPAGRISA-- A0A1D8NIF4/361-432 -----GQTLEQCKFNNYCTNPKCRF-----RHAMSKTICRNGKECTRMDCIFMHPVETPCKYGVNCANNNCIFSHPEGHGNG--- A0A1D8PCH2/327-401 -----DLALEQCKFGSQCTNLKCPR-----RHATSAVPCRAGAECRRVDCTFSHPLKEPCRFGTKCTNKVCMYQHPEGRTIASHT Q75E99/362-438 -P--AERSLEQCKFGVKCTNKRCKY-----RHARSHIMCREGAACTRIDCFFGHPINEPCKFGAECRNAHCLFQHPPGRSLPDKS R9X8F3/363-439 -P--AERSLEQCKFGMKCTNKRCKY-----RHARSHIMCREGAACTRIDCFFGHPINEPCKFGAECRNAHCLFQHPPGRALPDKP B9W6U1/327-401 -----DLALEQCKFGSQCTNVKCPR-----RHATSTVPCRSGAECRRVDCTFAHPLKEPCRFGIKCTNKVCMYQHPEGRTITSHT J5PV67/386-461 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHVMCREGANCTRIDCLFGHPINEDCRFGVDCKNIYCLFKHPPGRVLPERK J8LNV2/384-459 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHVMCREGANCTRIDCLFGHPINEDCRFGVDCKNMHCLFRHPPGRVVPEKK A0A0L8VQM3/380-455 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK A0A0L8RIY6/395-470 ----VEKSLAQCKFGTHCTNKRCKY-----RHARSHVMCREGANCTRIDCLFGHPINEDCRFGVDCKNMYCLFTHPPGRVVPEKK H0GFV4/380-455 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK A8WL05/639-700 --------------PSEATSRVVPE-----APLQNMIHCRYAGACRNPVCHFKHP--KECRFGANCRNSGCYFYHKPSAPVST-- A0A2G5T8B3/640-700 ---------------SEASARVVPE-----APLQNMIHCRYAGGCRNPVCHFKHP--KECRFGANCRNSGCYFYHKPSAPAST-- A0A2A6CSF5/1096-1151 --------------------RAGVP-----STLMSSIPCRFAAGCTNPICTYKHP--KECRFGQNCKNAYCYFYHPPAGRISA-- Q6C5Z5/361-432 -----GQTLEQCKFNNYCTNPKCRF-----RHAMSKTICRNGKECTRMDCIFMHPVETPCKYGVNCANNNCIFSHPEGHGNG--- C4YFB6/327-401 -----DLALEQCKFGSQCTNLKCPR-----RHATSAVPCRAGAECRRVDCTFSHPLKEPCRFGTKCTNKVCMYQHPEGRTIASHT N1P9P0/384-459 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK C8Z8C9/380-455 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK B3LHI2/380-455 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK A6ZU60/396-471 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK G2WDY0/387-462 ----VEKSLEQCKFGTHCTNKRCKY-----RHARSHIMCREGANCTRIDCLFGHPINEDCRFGVNCKNIYCLFRHPPGRVLPEKK #=GC scorecons 0000122243444433345544543000005554736499366495645948499325498894695933948496665345321 #=GC scorecons_70 __________________________________*_*_**_*__*____*_*_**____****_**_*__*_*_***________ #=GC scorecons_80 __________________________________*___**____*____*_*_**____****__*_*__*_*_*__________ #=GC scorecons_90 ______________________________________**____*____*_*_**____*_**__*_*__*_*_*__________ //