# STOCKHOLM 1.0
#=GF ID 3.40.50.10810/FF/000054
#=GF DE Helicase, Snf2 family
#=GF AC 3.40.50.10810/FF/000054
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 83.267
#=GS A5I2D8/576-823      AC A5I2D8
#=GS A5I2D8/576-823      OS Clostridium botulinum A str. Hall
#=GS A5I2D8/576-823      DE Putative helicase
#=GS A5I2D8/576-823      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A5I268/615-849      AC A5I268
#=GS A5I268/615-849      OS Clostridium botulinum A str. Hall
#=GS A5I268/615-849      DE Putative helicase
#=GS A5I268/615-849      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS Q8REE7/599-840      AC Q8REE7
#=GS Q8REE7/599-840      OS Fusobacterium nucleatum subsp. nucleatum ATCC 25586
#=GS Q8REE7/599-840      DE SWF/SNF family helicase
#=GS Q8REE7/599-840      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS Q8EGF3/633-847      AC Q8EGF3
#=GS Q8EGF3/633-847      OS Shewanella oneidensis MR-1
#=GS Q8EGF3/633-847      DE Helicase/SNF2 family domain protein
#=GS Q8EGF3/633-847      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; 
#=GS A0A426FXV5/583-779  AC A0A426FXV5
#=GS A0A426FXV5/583-779  OS Streptococcus halitosis
#=GS A0A426FXV5/583-779  DE DEAD/DEAH box helicase
#=GS A0A426FXV5/583-779  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus halitosis; 
#=GS A0A220ULT4/619-833  AC A0A220ULT4
#=GS A0A220ULT4/619-833  OS Shewanella bicestrii
#=GS A0A220ULT4/619-833  DE Helicase
#=GS A0A220ULT4/619-833  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella bicestrii; 
#=GS Q8DP39/584-780      AC Q8DP39
#=GS Q8DP39/584-780      OS Streptococcus pneumoniae R6
#=GS Q8DP39/584-780      DE SWF/SNF family ATP-dependent RNA helicase
#=GS Q8DP39/584-780      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS I2J2A6/584-780      AC I2J2A6
#=GS I2J2A6/584-780      OS Streptococcus sp. SK643
#=GS I2J2A6/584-780      DE Bacterial SNF2 helicase associated
#=GS I2J2A6/584-780      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp. SK643; 
#=GS A0A139QUK2/161-357  AC A0A139QUK2
#=GS A0A139QUK2/161-357  OS Streptococcus oralis
#=GS A0A139QUK2/161-357  DE SWF/SNF family helicase
#=GS A0A139QUK2/161-357  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis; 
#=GS F7KY27/213-454      AC F7KY27
#=GS F7KY27/213-454      OS Fusobacterium nucleatum subsp. animalis 11_3_2
#=GS F7KY27/213-454      DE Helicase, Snf2 family
#=GS F7KY27/213-454      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. animalis; 
#=GS M3JHR8/583-779      AC M3JHR8
#=GS M3JHR8/583-779      OS Streptococcus oralis subsp. tigurinus AZ_3a
#=GS M3JHR8/583-779      DE Superfamily II DNA/RNA helicase
#=GS M3JHR8/583-779      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis; Streptococcus oralis subsp. tigurinus; 
#=GS A0A0M1L6N2/576-823  AC A0A0M1L6N2
#=GS A0A0M1L6N2/576-823  OS Clostridium botulinum
#=GS A0A0M1L6N2/576-823  DE DEAD/DEAH box helicase family protein
#=GS A0A0M1L6N2/576-823  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS C1FNP2/576-823      AC C1FNP2
#=GS C1FNP2/576-823      OS Clostridium botulinum A2 str. Kyoto
#=GS C1FNP2/576-823      DE Helicase, SNF2/RAD54 family
#=GS C1FNP2/576-823      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1KS53/578-823      AC B1KS53
#=GS B1KS53/578-823      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1KS53/578-823      DE Helicase, SNF2/RAD54 family
#=GS B1KS53/578-823      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0S6U5L7/576-823  AC A0A0S6U5L7
#=GS A0A0S6U5L7/576-823  OS Clostridium botulinum B str. Osaka05
#=GS A0A0S6U5L7/576-823  DE Helicase, SNF2/RAD54 family protein
#=GS A0A0S6U5L7/576-823  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0L9ZWQ3/615-849  AC A0A0L9ZWQ3
#=GS A0A0L9ZWQ3/615-849  OS Clostridium botulinum
#=GS A0A0L9ZWQ3/615-849  DE DNA helicase
#=GS A0A0L9ZWQ3/615-849  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1L1U4/615-849      AC B1L1U4
#=GS B1L1U4/615-849      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1L1U4/615-849      DE Helicase, Snf2 family
#=GS B1L1U4/615-849      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A1L3NJ21/616-849  AC A0A1L3NJ21
#=GS A0A1L3NJ21/616-849  OS Clostridium botulinum
#=GS A0A1L3NJ21/616-849  DE Uncharacterized protein
#=GS A0A1L3NJ21/616-849  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0H2ZPR1/584-780  AC A0A0H2ZPR1
#=GS A0A0H2ZPR1/584-780  OS Streptococcus pneumoniae D39
#=GS A0A0H2ZPR1/584-780  DE Snf2 family protein
#=GS A0A0H2ZPR1/584-780  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A2U3S0Y7/584-780  AC A0A2U3S0Y7
#=GS A0A2U3S0Y7/584-780  OS Streptococcus pneumoniae
#=GS A0A2U3S0Y7/584-780  DE Snf2 family protein
#=GS A0A2U3S0Y7/584-780  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A139RKZ0/270-466  AC A0A139RKZ0
#=GS A0A139RKZ0/270-466  OS Streptococcus oralis
#=GS A0A139RKZ0/270-466  DE SWF/SNF family helicase
#=GS A0A139RKZ0/270-466  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus oralis; 
#=GF SQ 21
A5I2D8/576-823              ------IDFVERNKKFKELVNSIRDIKDIDYDVPESLHSIMRPYQRFGFKWFKTLASCGFGGILADEMGLGKTLQTVAFIKSEVE--ENKNKPMPSLVVCPTSLVYNWEDEIKKFQPDLKCTLISGDKESREESIKAIDISDIVITSYALIRRDIDKYEKVKFRYCFLDEAQNIKNPQSLNAQSVKSIKANNYFALTGTPVENSLTELWSIFDFIMPGYLLNYRRFYAKYESPIVKDKNEEALKELNNHIKPFILR--
A5I268/615-849              --------FIKEKDLLQNISSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGGILADEMGLGKTIQTISFLLSE--------KEIKSLIVTPTSLIYNWQDEFQKFAETLKIGVIHGSKEERMKVLDDREEYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKVRFALTGTPIENNLMELWSIFDFIMPGYLYSEERFQEKFIDKV-----EANIDKLKTLIRPFILR--
Q8REE7/599-840              NVLQNKYMDIEKNQDFNKL------FEQKVIEIPSKYKKILREYQIVGVEWMLKLRAMNLGGILADDMGLGKTLQVITYLESVK-------RERACLIVTPASLILNWENEFNKFNSSVLTLSIYGDRKNREVLLSNL-KNEVVITSYDYLKRDMDLYENIDFDTIILDEAQYIKNHKTKVAQAVKKINSKFKLALTGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYEKAIVLQTEKRVTERLKNMVEPFILR--
Q8EGF3/633-847              -----------------------------------------RPYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQKQLKSAAGPHLPSLIICPTSLVGNWAKEAAKFAPSLTLAVIHG--AQRGPLLARLSEFDVVVTTYPLMVRDNDYYQAQAFEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLPGLLGTTAYFNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRT
A0A426FXV5/583-779          -----------------------------------------RDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVT------EDSRVLILAPSGLIYNWADEFRKFAPQLDLAVVHGLKANREAILS--ENHQIYVTSYATFRQDSELYQEIAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPSVFALSGTPIENHLGELWAIFQIVLPGLLPSKKEFMKLP------------ADRVAQFIKPFVMRRK
A0A220ULT4/619-833          -----------------------------------------RAYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQQEAKLAGQPKLPSLIICPTSLVGNWAKEAAKFAPSLTLAVIHG--AQRGPLLSRLSEFDVVVTTYPLMVRDYDYYQAQPFEHIVLDEAQQIKNAQAKVSQQIKALQAPFRLCLTGTPLENHLGELKSLMDFCLPGLLGTTAYFNKAFRYRIERYGDGEQAKVLSQRIAPFVLRRT
Q8DP39/584-780              -----------------------------------------RDYQEKGIGWLQMLHHYDFGGILADDMGLGKTLQTIAFLTSQVT------KESRVLILAPSGLIYNWADEFQKFAPQLDVAVVHGLKASREEILA--ESHQIYVTSYATFRQDSELYQGMAFDFLFLDEAQVMKNAQTKIAQTLRQFVVPSVFALSGTPIENHLGELWSIFQIVMPGLLPSKKEFMKLP------------AERVAQFIKPFVMRRK
I2J2A6/584-780              -----------------------------------------RDYQEKGIRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVT------KDSRVLILAPSGLIYNWADEFKKFSPQLDVTVVHGLKATREELLA--EKHQIYVTSYATFRQDSDLYQEMSFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFALSGTPIENHLGELWSIFQIVMPGLLPSKKEFMKLP------------AERIAQFIKPFVMRRK
A0A139QUK2/161-357          -----------------------------------------RDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVT------EDSRVLILAPSGLIYNWADEFRKFAPQLDLAVVHGLKANREVILS--ENHQVYVTSYASFRQDSEFYQEMSFDFLFLDEAQVMKNAHTKIAQSLRQFVVPAVFALSGTPIENHLGELWSIFQIVLPGLLPSKKEFMKLP------------ADRVAQFIKPFVMRRK
F7KY27/213-454              NVLQNKYIDIEKDQNFNKL------FEQKIEEIPTKYKKILREYQIVGVEWMLKLRSMNLGGILADDMGLGKTLQVITYLESVK-------RERPCLIITPASLILNWENEFNKFNSSVSILSIYGDRKNREELLSNL-KNEVIITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTKAAQAVKKINSEFKLALTGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVLQAEKNVIERLKNMVEPFILR--
M3JHR8/583-779              -----------------------------------------RDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVT------EDSRVLILAPSGLIYNWADEFRKFAPQLDLAVVHGLKANREAILS--ENHQIYVTSYPTFRQDSELYQEMVFDFLFLDEAQVMKNAHTKIAQSLRQFVVPAVFALSGTPIENHLGELWSIFQIVLPGLLPSKKEFMKLP------------ADRVAQFIKPFVMRRK
A0A0M1L6N2/576-823          ------IDFVERNKKFKELVNSIRDIKDIDYDVPESLHSIMRPYQRFGFKWFKTLASCGFGGILADEMGLGKTLQTVAFIKSEVE--ENKNKPMPSLVVCPTSLVYNWEDEIKKFQPDLKCTLISGDKESREESIKAIDISDIVITSYALIRRDIDKYEKVKFRYCFLDEAQNIKNPQSLNAQSVKSIKANNYFALTGTPVENSLTELWSIFDFIMPGYLLNYRRFYAKYESPIVKDKNEEALKELNNHIKPFILR--
C1FNP2/576-823              ------IDFVERNKKFKELVNSIRDIKDIDYDVPESLHSIMRPYQRFGFKWFKTLASCGFGGILADEMGLGKTLQTVAFIKSEVE--ENKNKPMPSLVVCPTSLVYNWEDEIKKFQPDLKCTLISGDKESREESIKAIDISDIVITSYALIRRDIDKYEKVKFRYCFLDEAQNIKNPQSLNAQSVKSIKANNYFALTGTPVENSLTELWSIFDFIMPGYLLNYRRFYAKYESPIVKDKNEEALKELNNHIKPFILR--
B1KS53/578-823              --------FVGRNKKFKELVNSIRDIKDIDYDVPKSLQSIMRPYQRFGFKWFKTLASCGFGGILADEMGLGKTLQTIAFIKSEVE--ENKNKPMPSLVVCPTSLVYNWEDEIKKFQPDLKCTLISGDKESREESIKAIDTSDIVITSYALIRRDIDKYEKAKFRYCFLDEAQNIKNPQSLNAQSVKSIKANNYFALTGTPVENSLTELWSIFDFIMPGYLLNYRRFYAKYESPIVKDKNEEALKELNNHIKPFILR--
A0A0S6U5L7/576-823          ------IYFVERNKKFKELVNSIRDIKDIDYEVPKNLQSIMRPYQRFGFKWFKTLASCGFGGILADEMGLGKTLQTIAFIKSEVE--ENKNKPMPSLVVCPTSLVYNWEDEMKKFQPDLKCTLISGDKDSREESIKAIDASDVVITSYALIRRDIDKYEKVKFRYCFLDEAQNIKNPQSLNAQSVKSIKANNYFALTGTPIENSLTELWSIFDFIMPGYLLNYRKFYAKYESPIVKDKNEEALRELNNHIKPFILR--
A0A0L9ZWQ3/615-849          --------FIKEKDLLQNISSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGGILADEMGLGKTIQTISFLLSE--------KEIKSLIVTPTSLIYNWQDEFQKFAETLKIGVIHGSKEERMKVLDDREEYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKVRFALTGTPIENNLMELWSIFDFIMPGYLYSEERFQEKFIDKV-----EANIDKLKTLIRPFILR--
B1L1U4/615-849              --------FIKEKDLLQNISSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGGILADEMGLGKTIQTISFLLSE--------RRTKSLIVTPTSLIYNWQDEFQKFAETLKIGVIHGIKEERMKVLDDREEYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKVRFALTGTPIENNLMELWSIFDFIMPGYLYSKERFQEKFIDKV-----EANIDKLKTLIRPFILR--
A0A1L3NJ21/616-849          ---------IKEKDLLQNISNRITKINDGYYEVPKNLNATLREYQIAGYRWMKTLSNMKFGGILADEMGLGKTIQTISFLLSE--------KGAKSLIVAPTSLIYNWQDEFQKFAKTLKIGVIHGSKEERMKVLDDREKYDVLLTTYGTLKNDFQLYKDIIFDYCIIDEGQNIKNPLAQNTDSVKRINSKVRFALTGTPIENNLMELWSIFDFIMPGYLYSEERFQEKFIDEV-----EADIDKLKTLIRPFILR--
A0A0H2ZPR1/584-780          -----------------------------------------RDYQEKGIGWLQMLHHYDFGGILADDMGLGKTLQTIAFLTSQVT------KESRVLILAPSGLIYNWADEFQKFAPQLDVAVVHGLKASREEILA--ESHQIYVTSYATFRQDSELYQGMAFDFLFLDEAQVMKNAQTKIAQTLRQFVVPSVFALSGTPIENHLGELWSIFQIVMPGLLPSKKEFMKLP------------AERVAQFIKPFVMRRK
A0A2U3S0Y7/584-780          -----------------------------------------RDYQEKGIGWLQMLHHYDFGGILADDMGLGKTLQTIAFLTSQVT------KESRVLILAPSGLIYNWADEFQKFAPQLDVAVVHGLKASREEILA--ESHQIYVTSYATFRQDSELYQGMAFDFLFLDEAQVMKNAQTKIAQTLRQFVVPSVFALSGTPIENHLGELWSIFQIVMPGLLPSKKEFMKLP------------AERVAQFIKPFVMRRK
A0A139RKZ0/270-466          -----------------------------------------RDYQEKGIRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVT------EDSRILILAPSGLIYNWADEFRKFAPQLDLAVVHGLKANREAILS--ENHQIYVTSYATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFALSGTPIENHLGELWSIFQIVLPGLLPSKKEFMKLP------------VDRVAQFIKPFVMRRK
#=GC scorecons              000000001211111111101010011101122211111119499339449544944447999999799999969776873753200000054345976495697599469549955474446759264495447411434574696954555946495443955457997947995554467567453443377969996995949778776657795935344935341113100012214546443859977911
#=GC scorecons_70           _________________________________________*_**__*__*___*____*********************_*______________**__*_***_**_**__**___*____*_*_*__*___*_______*__***_____*___*____*____*****_***_____**__*_______**********_*_******___***_*_____*___________________*___*_*****__
#=GC scorecons_80           _________________________________________*_**__*__*___*____*******_******_**__*__*______________**__*__**_**__*__**___*____*_*____*______________*_*_____*___*____*____*****__**_________*_______***_***_**_*_******___***_*_____*_______________________*_**__*__
#=GC scorecons_90           _________________________________________*_**__*__*___*_____******_******_*___*_________________*___*__*__**__*__**__________*____*______________*_*_____*___*____*_____**_*__**___________________*_***_**_*_*__*_______*_*_____*_______________________*_**__*__
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