# STOCKHOLM 1.0
#=GF ID 2.30.42.10/FF/000223
#=GF DE USH1 protein network component harmonin
#=GF AC 2.30.42.10/FF/000223
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 24.862
#=GS A0A0S2Z4V1/208-293  AC A0A0S2Z4V1
#=GS A0A0S2Z4V1/208-293  OS Homo sapiens
#=GS A0A0S2Z4V1/208-293  DE Usher syndrome 1C (Autosomal recessive, severe), isoform CRA_a
#=GS A0A0S2Z4V1/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A0S2Z4V1/208-293  DR GO; GO:0005829; 
#=GS H3BLC4/208-292      AC H3BLC4
#=GS H3BLC4/208-292      OS Mus musculus
#=GS H3BLC4/208-292      DE Harmonin
#=GS H3BLC4/208-292      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A452S193/205-290  AC A0A452S193
#=GS A0A452S193/205-290  OS Ursus americanus
#=GS A0A452S193/205-290  DE USH1 protein network component harmonin
#=GS A0A452S193/205-290  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus americanus; 
#=GS A0A2K6GEP5/208-293  AC A0A2K6GEP5
#=GS A0A2K6GEP5/208-293  OS Propithecus coquereli
#=GS A0A2K6GEP5/208-293  DE Uncharacterized protein
#=GS A0A2K6GEP5/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus; Propithecus coquereli; 
#=GS A0A286XKI1/208-296  AC A0A286XKI1
#=GS A0A286XKI1/208-296  OS Cavia porcellus
#=GS A0A286XKI1/208-296  DE Uncharacterized protein
#=GS A0A286XKI1/208-296  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Caviidae; Cavia; Cavia porcellus; 
#=GS M3W378/208-292      AC M3W378
#=GS M3W378/208-292      OS Felis catus
#=GS M3W378/208-292      DE Uncharacterized protein
#=GS M3W378/208-292      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS F7IHC9/208-296      AC F7IHC9
#=GS F7IHC9/208-296      OS Callithrix jacchus
#=GS F7IHC9/208-296      DE USH1 protein network component harmonin
#=GS F7IHC9/208-296      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2K6ATZ6/208-293  AC A0A2K6ATZ6
#=GS A0A2K6ATZ6/208-293  OS Macaca nemestrina
#=GS A0A2K6ATZ6/208-293  DE Uncharacterized protein
#=GS A0A2K6ATZ6/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; 
#=GS A0A2K5EDN4/208-296  AC A0A2K5EDN4
#=GS A0A2K5EDN4/208-296  OS Aotus nancymaae
#=GS A0A2K5EDN4/208-296  DE Uncharacterized protein
#=GS A0A2K5EDN4/208-296  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A452VGH1/212-298  AC A0A452VGH1
#=GS A0A452VGH1/212-298  OS Ursus maritimus
#=GS A0A452VGH1/212-298  DE Uncharacterized protein
#=GS A0A452VGH1/212-298  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus maritimus; 
#=GS A0A2K6U5X3/208-296  AC A0A2K6U5X3
#=GS A0A2K6U5X3/208-296  OS Saimiri boliviensis boliviensis
#=GS A0A2K6U5X3/208-296  DE USH1 protein network component harmonin
#=GS A0A2K6U5X3/208-296  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS A0A2K5RD80/208-296  AC A0A2K5RD80
#=GS A0A2K5RD80/208-296  OS Cebus capucinus imitator
#=GS A0A2K5RD80/208-296  DE Uncharacterized protein
#=GS A0A2K5RD80/208-296  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2I3GZS3/208-293  AC A0A2I3GZS3
#=GS A0A2I3GZS3/208-293  OS Nomascus leucogenys
#=GS A0A2I3GZS3/208-293  DE Uncharacterized protein
#=GS A0A2I3GZS3/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2K6L1R4/208-293  AC A0A2K6L1R4
#=GS A0A2K6L1R4/208-293  OS Rhinopithecus bieti
#=GS A0A2K6L1R4/208-293  DE Uncharacterized protein
#=GS A0A2K6L1R4/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2I3S6K2/208-293  AC A0A2I3S6K2
#=GS A0A2I3S6K2/208-293  OS Pan troglodytes
#=GS A0A2I3S6K2/208-293  DE USH1 protein network component harmonin
#=GS A0A2I3S6K2/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K5L6D2/208-293  AC A0A2K5L6D2
#=GS A0A2K5L6D2/208-293  OS Cercocebus atys
#=GS A0A2K5L6D2/208-293  DE Uncharacterized protein
#=GS A0A2K5L6D2/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS A0A2I2ZNX8/208-293  AC A0A2I2ZNX8
#=GS A0A2I2ZNX8/208-293  OS Gorilla gorilla gorilla
#=GS A0A2I2ZNX8/208-293  DE USH1 protein network component harmonin
#=GS A0A2I2ZNX8/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2K5HJ32/208-293  AC A0A2K5HJ32
#=GS A0A2K5HJ32/208-293  OS Colobus angolensis palliatus
#=GS A0A2K5HJ32/208-293  DE Uncharacterized protein
#=GS A0A2K5HJ32/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; 
#=GS A0A2K5U3R5/208-293  AC A0A2K5U3R5
#=GS A0A2K5U3R5/208-293  OS Macaca fascicularis
#=GS A0A2K5U3R5/208-293  DE Uncharacterized protein
#=GS A0A2K5U3R5/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A2K6RI59/208-293  AC A0A2K6RI59
#=GS A0A2K6RI59/208-293  OS Rhinopithecus roxellana
#=GS A0A2K6RI59/208-293  DE Uncharacterized protein
#=GS A0A2K6RI59/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2R9A178/208-293  AC A0A2R9A178
#=GS A0A2R9A178/208-293  OS Pan paniscus
#=GS A0A2R9A178/208-293  DE Uncharacterized protein
#=GS A0A2R9A178/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS F7HFU8/208-293      AC F7HFU8
#=GS F7HFU8/208-293      OS Macaca mulatta
#=GS F7HFU8/208-293      DE Uncharacterized protein
#=GS F7HFU8/208-293      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A2J8P522/208-293  AC A0A2J8P522
#=GS A0A2J8P522/208-293  OS Pan troglodytes
#=GS A0A2J8P522/208-293  DE USH1C isoform 3
#=GS A0A2J8P522/208-293  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 23
A0A0S2Z4V1/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEGRELFMTDRERLAEARQREL---
H3BLC4/208-292              KEKKVFISLVGSRGLGCSISSGPIQKPGIFVSHVKPGSLSAEVGLETGDQIVEVNGIDFTNLDHKEGRELFMTDRERLEEARQRE----
A0A452S193/205-290          KEKKVFISLVGSRGLGCSISSGPVQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFLTDRERLEEARQREL---
A0A2K6GEP5/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNMDHKEGRELFMTDRERLAEARQREL---
A0A286XKI1/208-296          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISQVKPGSLSAEVGLEPGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEVRQRELQRQ
M3W378/208-292              KEKKVFISLVGSRGLGCSISSGPIQKPGIFISNVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFLTDRERLEEARQRE----
F7IHC9/208-296              KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEVRQRELQRQ
A0A2K6ATZ6/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2K5EDN4/208-296          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEVRQRELQRQ
A0A452VGH1/212-298          KEKKVFISLVGSRGLGCSISSGPVQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFLTDRERLEELQKQELL--
A0A2K6U5X3/208-296          KEKKVFISLVGSRGLGCSISSGSIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEVRQQELQRQ
A0A2K5RD80/208-296          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEVRQRELQRQ
A0A2I3GZS3/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2K6L1R4/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2I3S6K2/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2K5L6D2/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2I2ZNX8/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGQELFMTDRERLAEARQREL---
A0A2K5HJ32/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2K5U3R5/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2K6RI59/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2R9A178/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
F7HFU8/208-293              KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
A0A2J8P522/208-293          KEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEGRELFMTDRERLAEARQREL---
#=GC scorecons              99999999999999999999998899999989799999999999997999999999899898999998999799999969588796000
#=GC scorecons_70           ******************************************************************************_*_*****___
#=GC scorecons_80           ******************************************************************************_*_****____
#=GC scorecons_90           ***********************_********_*************_************************_******_*_**_*____
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