# STOCKHOLM 1.0
#=GF ID 2.10.25.10/FF/000797
#=GF DE Thrombomodulin
#=GF AC 2.10.25.10/FF/000797
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.923
#=GS 3gisZ03/79-121      AC P07204
#=GS 3gisZ03/79-121      OS Homo sapiens
#=GS 3gisZ03/79-121      DE Thrombomodulin
#=GS 3gisZ03/79-121      DR CATH; 3gis; Z:423-463; 
#=GS 3gisZ03/79-121      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 3gisZ03/79-121      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS P15306/440-479      AC P15306
#=GS P15306/440-479      OS Mus musculus
#=GS P15306/440-479      DE Thrombomodulin
#=GS P15306/440-479      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P15306/440-479      DR GO; GO:0005615; GO:0005774; GO:0005886; GO:0007565; GO:0007596; GO:0009986; GO:0016327; GO:0050819; 
#=GS Q9VS89/632-668      AC Q9VS89
#=GS Q9VS89/632-668      OS Drosophila melanogaster
#=GS Q9VS89/632-668      DE FI18763p1
#=GS Q9VS89/632-668      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VS89/632-668      DR GO; GO:0007412; GO:0031012; 
#=GS O35370/440-479      AC O35370
#=GS O35370/440-479      OS Rattus norvegicus
#=GS O35370/440-479      DE Thrombomodulin
#=GS O35370/440-479      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS O35370/440-479      DR GO; GO:0005615; GO:0005774; GO:0005886; GO:0010165; GO:0016327; GO:0032496; GO:0051591; 
#=GS Q8HZ48/441-479      AC Q8HZ48
#=GS Q8HZ48/441-479      OS Oryctolagus cuniculus
#=GS Q8HZ48/441-479      DE Thrombomodulin
#=GS Q8HZ48/441-479      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Lagomorpha; Leporidae; Oryctolagus; Oryctolagus cuniculus; 
#=GS Q8HZ48/441-479      DR GO; GO:0030195; GO:0045861; 
#=GS 3gisY03/79-121      AC P07204
#=GS 3gisY03/79-121      OS Homo sapiens
#=GS 3gisY03/79-121      DE Thrombomodulin
#=GS 3gisY03/79-121      DR CATH; 3gis; Y:423-463; 
#=GS 3gisY03/79-121      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 3gisY03/79-121      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS 3gisX03/79-121      AC P07204
#=GS 3gisX03/79-121      OS Homo sapiens
#=GS 3gisX03/79-121      DE Thrombomodulin
#=GS 3gisX03/79-121      DR CATH; 3gis; X:423-463; 
#=GS 3gisX03/79-121      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 3gisX03/79-121      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS 1dx5L03/79-118      AC P07204
#=GS 1dx5L03/79-118      OS Homo sapiens
#=GS 1dx5L03/79-118      DE Thrombomodulin
#=GS 1dx5L03/79-118      DR CATH; 1dx5; L:423-462; 
#=GS 1dx5L03/79-118      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1dx5L03/79-118      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS 1dx5K03/79-118      AC P07204
#=GS 1dx5K03/79-118      OS Homo sapiens
#=GS 1dx5K03/79-118      DE Thrombomodulin
#=GS 1dx5K03/79-118      DR CATH; 1dx5; K:423-462; 
#=GS 1dx5K03/79-118      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1dx5K03/79-118      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS 1dx5J03/79-118      AC P07204
#=GS 1dx5J03/79-118      OS Homo sapiens
#=GS 1dx5J03/79-118      DE Thrombomodulin
#=GS 1dx5J03/79-118      DR CATH; 1dx5; J:423-462; 
#=GS 1dx5J03/79-118      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1dx5J03/79-118      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS 1dx5I03/79-118      AC P07204
#=GS 1dx5I03/79-118      OS Homo sapiens
#=GS 1dx5I03/79-118      DE Thrombomodulin
#=GS 1dx5I03/79-118      DR CATH; 1dx5; I:423-462; 
#=GS 1dx5I03/79-118      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1dx5I03/79-118      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS P07204/441-480      AC P07204
#=GS P07204/441-480      OS Homo sapiens
#=GS P07204/441-480      DE Thrombomodulin
#=GS P07204/441-480      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P07204/441-480      DR GO; GO:0005509; GO:0005515; GO:0005886; GO:0005887; GO:0007596; GO:0009986; GO:0010544; GO:0030195; GO:0038023; GO:0050900; GO:0051918; 
#=GS Q543W3/440-479      AC Q543W3
#=GS Q543W3/440-479      OS Mus musculus
#=GS Q543W3/440-479      DE Thbd protein
#=GS Q543W3/440-479      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS W4YLY5/444-485      AC W4YLY5
#=GS W4YLY5/444-485      OS Strongylocentrotus purpuratus
#=GS W4YLY5/444-485      DE Uncharacterized protein
#=GS W4YLY5/444-485      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4YVG0/2506-2545    AC W4YVG0
#=GS W4YVG0/2506-2545    OS Strongylocentrotus purpuratus
#=GS W4YVG0/2506-2545    DE Delta-like protein
#=GS W4YVG0/2506-2545    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS A0A1A6GJJ6/471-510  AC A0A1A6GJJ6
#=GS A0A1A6GJJ6/471-510  OS Neotoma lepida
#=GS A0A1A6GJJ6/471-510  DE Uncharacterized protein
#=GS A0A1A6GJJ6/471-510  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Neotominae; Neotoma; Neotoma lepida; 
#=GS Q71U07/441-480      AC Q71U07
#=GS Q71U07/441-480      OS Saimiri sciureus
#=GS Q71U07/441-480      DE Thrombomodulin
#=GS Q71U07/441-480      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri sciureus; 
#=GS A0A2R8ZHT7/497-536  AC A0A2R8ZHT7
#=GS A0A2R8ZHT7/497-536  OS Pan paniscus
#=GS A0A2R8ZHT7/497-536  DE Uncharacterized protein
#=GS A0A2R8ZHT7/497-536  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS H2QK24/497-536      AC H2QK24
#=GS H2QK24/497-536      OS Pan troglodytes
#=GS H2QK24/497-536      DE Thrombomodulin
#=GS H2QK24/497-536      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS B4PC96/638-674      AC B4PC96
#=GS B4PC96/638-674      OS Drosophila yakuba
#=GS B4PC96/638-674      DE Uncharacterized protein, isoform B
#=GS B4PC96/638-674      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 20
3gisZ03/79-121              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDCDSG
P15306/440-479              DIDEC--SQGEC---FTSECRNFPGSYECICGPDTALAGQISKDC---
Q9VS89/632-668              DVDECLVNNGGC----QQVCRNLPGSYGCICAAGYELLKLD-------
O35370/440-479              DIDEC--SQGEC---LTNECRNLPGSYECICGPDTALAGQISKDC---
Q8HZ48/441-479              DIDEC--DNGYC----QDECRNLPGSYECICGPDSPLAGQVSTEC---
3gisY03/79-121              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDCDSG
3gisX03/79-121              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDCDSG
1dx5L03/79-118              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDC---
1dx5K03/79-118              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDC---
1dx5J03/79-118              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDC---
1dx5I03/79-118              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALAGQIGTDC---
P07204/441-480              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALARHIGTDC---
Q543W3/440-479              DIDEC--SQGEC---FTSECRNFPGSYECICGPDTALAGQISKDC---
W4YLY5/444-485              DVNECLLSNGGCHPTQTKVCNNTFGGFQCLCSPGFE-----GELCDI-
W4YVG0/2506-2545            -VNECMQSVPVC--PVNKVCRNIPGSFECICHQGFV-----GEHCDIP
A0A1A6GJJ6/471-510          DIDEC--SQGEC---FGSECRNLPGSYECICGPNTALAGQISKDC---
Q71U07/441-480              DIDEC--ENGGF---CSGVCHNLPGTFECICGPDSALARHIGTDC---
A0A2R8ZHT7/497-536          DIDEC--ENGGF---CSGVCRNLPGTFECICGPDSALARYIGNDC---
H2QK24/497-536              DIDEC--ENGGF---CSGVCRNLPGTFECICGPDSALARYIGNDC---
B4PC96/638-674              DVDECLVNNGGC----QQVCRNLPGSYGCICAAGYELLKLD-------
#=GC scorecons              777990045755000244696967957698956645543334346000
#=GC scorecons_70           *****____*_________*_*_**_*****_*___________*___
#=GC scorecons_80           *****____*_________*_*_**_*_***_________________
#=GC scorecons_90           ___**______________*_*__*___***_________________
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