# STOCKHOLM 1.0
#=GF ID 1.25.70.10/FF/000024
#=GF DE Transcription termination factor, mitochondrial
#=GF AC 1.25.70.10/FF/000024
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.277
#=GS Q9V3F3/173-397      AC Q9V3F3
#=GS Q9V3F3/173-397      OS Drosophila melanogaster
#=GS Q9V3F3/173-397      DE Transcription termination factor, mitochondrial
#=GS Q9V3F3/173-397      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9V3F3/173-397      DR GO; GO:0003677; GO:0005739; GO:0006393; 
#=GS B3S5R0/58-294       AC B3S5R0
#=GS B3S5R0/58-294       OS Trichoplax adhaerens
#=GS B3S5R0/58-294       DE Uncharacterized protein
#=GS B3S5R0/58-294       DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS E9GGQ1/175-394      AC E9GGQ1
#=GS E9GGQ1/175-394      OS Daphnia pulex
#=GS E9GGQ1/175-394      DE Uncharacterized protein
#=GS E9GGQ1/175-394      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS Q7PWR6/349-560      AC Q7PWR6
#=GS Q7PWR6/349-560      OS Anopheles gambiae
#=GS Q7PWR6/349-560      DE AGAP008874-PA
#=GS Q7PWR6/349-560      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS A0A1S4H088/401-610  AC A0A1S4H088
#=GS A0A1S4H088/401-610  OS Anopheles gambiae
#=GS A0A1S4H088/401-610  DE Uncharacterized protein
#=GS A0A1S4H088/401-610  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS B7Q1Z7/57-290       AC B7Q1Z7
#=GS B7Q1Z7/57-290       OS Ixodes scapularis
#=GS B7Q1Z7/57-290       DE Transcription termination factor, putative
#=GS B7Q1Z7/57-290       DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A182VU96/399-612  AC A0A182VU96
#=GS A0A182VU96/399-612  OS Anopheles minimus
#=GS A0A182VU96/399-612  DE Uncharacterized protein
#=GS A0A182VU96/399-612  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; minimus group; Anopheles minimus; 
#=GS A0A1W4UW90/170-398  AC A0A1W4UW90
#=GS A0A1W4UW90/170-398  OS Drosophila ficusphila
#=GS A0A1W4UW90/170-398  DE uncharacterized protein LOC108090054
#=GS A0A1W4UW90/170-398  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0J9R2C6/166-397  AC A0A0J9R2C6
#=GS A0A0J9R2C6/166-397  OS Drosophila simulans
#=GS A0A0J9R2C6/166-397  DE Uncharacterized protein
#=GS A0A0J9R2C6/166-397  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4HXG1/166-397      AC B4HXG1
#=GS B4HXG1/166-397      OS Drosophila sechellia
#=GS B4HXG1/166-397      DE GM14869
#=GS B4HXG1/166-397      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3N9T1/178-399      AC B3N9T1
#=GS B3N9T1/178-399      OS Drosophila erecta
#=GS B3N9T1/178-399      DE Uncharacterized protein
#=GS B3N9T1/178-399      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GF SQ 11
Q9V3F3/173-397              -------GALNSERDAMPQRNRVYYISEKLDVSPDIVSKYLSKRLFILEMPFEMFEKNLQHMIDYNVSPINVLK----DLWAFRYTPKSVQLRLERAKR--------AKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVV-----------EYLAHRLGFSTSEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAQFTRFEVAQNPRILCHSLKTTKERMEELKS-HGCRPS---SLVILCRSRREYDKFLQNW-----
B3S5R0/58-294               -----------------DDQSRIY--LQSLGVDLGKVNKTFRNR---IIWSLDVIEPKIRILLKAGIEKSSICQMIIYRPRILNMNEDILKIRLVFLKSLGLTESKLSKLLSEHSFLLTYQESDAQNLLSFLQSRDFNKFKAWDIIIKRPRLILVGAQNLRHTLKFTEKQSRMIFDLNPSILGHSQNSLQRKCDYLIKKMGYSHQVIAENAAILSCSLDTIMYRYSSLSK-HSVDKE----LVPIAQLLLSTDDAFQEDILNGR
E9GGQ1/175-394              ----KM------EAMECEHPSKFHFLAHALKVPIAEIMNQLETKSFLVSMSYLRIQEGVNICLEAGVEKEDLLN----DLWVLRNRPVKLRNRIETLQQ--------S-KIPVKPWVLRARIESFKTHIQEYWKERKEIELDHNLS-----------SYLVTRLKCDPSVVARMMKVFPNLQRATIRKVKPNMDFLLIDKCVDPSLIIMTPRLLCIKLDTLKDRLEQLEK-NNIQYA---SLWMIVRCQRHFDDYIKR------
Q7PWR6/349-560              ------------------NTNRIYYFADSTGFKPGEVTEQFARRTFMFRIPKDSFLANLKLFLEH-MNREDILA----DLWAFKYSPGIVAERIARAKE--------VRGKKLMPWMVRCPDVVLEKSLQLTKESGALLGENETIV-----------EYFCKRLGFDREVANSIFIKAPSVRNVRITKVKKVIDYLLDELDYTPNDIALNPRILMHSLQTTKKRMAQLKE-IGCRPK---SLIIVCKSQRQYDLFVKE------
A0A1S4H088/401-610          --------------------NRIYYFADSTGFKPGEVTEQFARRTFMFRIPKDSFLANLKLFLEH-MNREDILA----DLWAFKYSPGIVAERIARAKE--------VRGKKLMPWMVRCPDVVLEKSLQLTKESGALLGENETIV-----------EYFCKRLGFDREVANSIFIKAPSVRNVRITKVKKVIDYLLDELDYTPNDIALNPRILMHSLQTTKKRMAQLKE-IGCRPK---SLIIVCKSQRQYDLFVKE------
B7Q1Z7/57-290               -VVKKL--GLPGLRNQLSHMTEL--LASRLGLDEVGALQLVEKHPCLLTQEPGRLERVLELLLGAGVSREAILK----DPWVFRHNEEVMRARVERVSQ--------A-GTPVRPWMLRCPEETLERHLERWSARRTALGPHTDTL-----------HYLAERLRCSGAYVRFLADRNPRLLTINAPKLKQVLDLLFAN-GYTPEQVCLFPRVLSCSLGRLERRLGTLRALPGAGESALPSLYLLNATEKEFVRACRRRLLEQQ
A0A182VU96/399-612          ------------------NTNRIYYFSDNTGFKPSEVTEQFARRTFMFRIPKDSFLANLKLFMEH-MNREDILA----DLWAFKYSPGIVAERIARAKE--------VRGKKLMPWMVRCPDVVLEKSLQLTKDSGALLGENETIV-----------EYFCKRLGFDRDVANSIIIKTPSVRNVRITKVKKVIDYLLDELDYKPNDIALNPRILMHSLQTTKKRMAQLKE-IGCRPK---SLIIVCKSQRQYEMFVKEWM----
A0A1W4UW90/170-398          ---RKLVGILNSERNTMPHKNRVYYISEKLQVSPEIVTKYLSKRLFILEMPYEMFEKNLQHMIDYNVSPINILK----DLWAFRYTPKSVQLRLERAKR--------AKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVV-----------EYLAHRLGFSASEAKVIMDKHPQVHTVRVTKIKEVLDYLLDEAKFSKFEIAQVPRILCHSLKTTKERMEELQS-HGCRPS---SLVIVCRSRREYDKFLQNW-----
A0A0J9R2C6/166-397          PRLRKLVGALNSERDAMPQRNRVYYISEKLQVSPDIVSKYLSKRLFILEMPFEMFEKNLQHMIDYNVSPINVLK----DLWAFRYTPKSVQLRLERAKR--------AKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVV-----------EYLAHRLGFSTSEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAKFSRFEVAQNPRILCHSLKTTKERMEELKS-HGCRPS---SLVILCRSRREYDKFLQTW-----
B4HXG1/166-397              PRLRKLVGALNSERDAMPQRNRVYYISEKLQVSPDIVSKYLSKRLFILEMPFEMFEKNLQHMIDYNVSPINVLK----DLWAFRYTPKSVQLRLERAKR--------AKKDKIMPWMVRCPEPILQRSLKLSLDELKVLGEFSSVV-----------EYLAHRLGFSTSEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAKFSRFEVAQNPRILCHSLKTTKERMEELKS-HGCRPS---SLVILCRSRREYDKFLQTW-----
B3N9T1/178-399              ----------NSERDAMPQRNRVYYISEKLQVGPDIVSKYLSKRLFILEMPYEMLEKNLQHMIDYDVSPINVLK----DLWAFRYTPKSVQLRLERAKR--------AKKDKIMPWMVRCPEPILQRSLKLTLDELKVLGELSSVV-----------EYLAHRLGFSASEAKAIMDKHPQVHTVRVTKIKEVLDYLLDEAQFTRFEIAQVPRILCHSLRTTKARMEELKS-HGCRPS---SLVILCRSRREYAKFLQHW-----
#=GC scorecons              000011000111121112325656434446453433635353572545345343543464446542644446640000767566545346439545564000000005343444776676653465547443244333554234550000000000057644795643435437444394644544575745496964523644237634777944794755395449540464544000694554544645535454200000
#=GC scorecons_70           _____________________*______________*______*______________*_______*____**_____***_*_________*____*________________*****_________*_____________________________**__**_*_______*____*_*______*_*___****_________*___****__**_*___*___*____*_______**______________________
#=GC scorecons_80           ________________________________________________________________________________*___________*_____________________*_____________*__________________________________*______________*__________*___*_*__________*___*__*__**_*___*___*_____________*______________________
#=GC scorecons_90           ____________________________________________________________________________________________*______________________________________________________________________*______________*______________*_*_________________*___*_____*___*_____________*______________________
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