# STOCKHOLM 1.0
#=GF ID 1.20.1540.10/FF/000029
#=GF DE Rhomboid protease 2
#=GF AC 1.20.1540.10/FF/000029
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.548
#=GS P9WM21/31-228      AC P9WM21
#=GS P9WM21/31-228      OS Mycobacterium tuberculosis H37Rv
#=GS P9WM21/31-228      DE Uncharacterized protein Rv1337
#=GS P9WM21/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS E2IBS4/31-228      AC E2IBS4
#=GS E2IBS4/31-228      OS Mycobacterium tuberculosis H37Rv
#=GS E2IBS4/31-228      DE Rhomboid protease 2
#=GS E2IBS4/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS Q9RSX7/48-231      AC Q9RSX7
#=GS Q9RSX7/48-231      OS Deinococcus radiodurans R1
#=GS Q9RSX7/48-231      DE Uncharacterized protein
#=GS Q9RSX7/48-231      DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; 
#=GS Q7NPH4/15-194      AC Q7NPH4
#=GS Q7NPH4/15-194      OS Gloeobacter violaceus PCC 7421
#=GS Q7NPH4/15-194      DE Glr0081 protein
#=GS Q7NPH4/15-194      DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; 
#=GS L8ALH7/12-196      AC L8ALH7
#=GS L8ALH7/12-196      OS Bacillus subtilis BEST7613
#=GS L8ALH7/12-196      DE Uncharacterized protein
#=GS L8ALH7/12-196      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS P74553/12-196      AC P74553
#=GS P74553/12-196      OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS P74553/12-196      DE Slr1461 protein
#=GS P74553/12-196      DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS G0TIE3/31-228      AC G0TIE3
#=GS G0TIE3/31-228      OS Mycobacterium canettii CIPT 140010059
#=GS G0TIE3/31-228      DE Putative integral membrane protein
#=GS G0TIE3/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium canettii; 
#=GS P9WM20/31-228      AC P9WM20
#=GS P9WM20/31-228      OS Mycobacterium tuberculosis CDC1551
#=GS P9WM20/31-228      DE Uncharacterized protein MT1378
#=GS P9WM20/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P64816/31-228      AC P64816
#=GS P64816/31-228      OS Mycobacterium tuberculosis variant bovis AF2122/97
#=GS P64816/31-228      DE Uncharacterized protein Mb1372
#=GS P64816/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328GPP3/31-228  AC A0A328GPP3
#=GS A0A328GPP3/31-228  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328GPP3/31-228  DE Rhomboid family intramembrane serine protease
#=GS A0A328GPP3/31-228  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U237/31-228      AC A5U237
#=GS A5U237/31-228      OS Mycobacterium tuberculosis H37Ra
#=GS A5U237/31-228      DE Putative integral membrane protein
#=GS A5U237/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3M5S6/31-228  AC A0A0H3M5S6
#=GS A0A0H3M5S6/31-228  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M5S6/31-228  DE Probable integral membrane protein
#=GS A0A0H3M5S6/31-228  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS R4MCQ1/31-228      AC R4MCQ1
#=GS R4MCQ1/31-228      OS Mycobacterium tuberculosis CAS/NITR204
#=GS R4MCQ1/31-228      DE Membrane protein
#=GS R4MCQ1/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS E2IBT0/31-228      AC E2IBT0
#=GS E2IBT0/31-228      OS Mycobacterium tuberculosis variant bovis
#=GS E2IBT0/31-228      DE Rhomboid protease 2
#=GS E2IBT0/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS R4M1F7/31-228      AC R4M1F7
#=GS R4M1F7/31-228      OS Mycobacterium tuberculosis str. Haarlem/NITR202
#=GS R4M1F7/31-228      DE Membrane protein
#=GS R4M1F7/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS E2IBS8/31-228      AC E2IBS8
#=GS E2IBS8/31-228      OS Mycobacterium tuberculosis variant bovis BCG
#=GS E2IBS8/31-228      DE Rhomboid protease 2
#=GS E2IBS8/31-228      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A2C5STF9/31-228  AC A0A2C5STF9
#=GS A0A2C5STF9/31-228  OS Mycobacterium tuberculosis
#=GS A0A2C5STF9/31-228  DE Integral membrane protein
#=GS A0A2C5STF9/31-228  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GF SQ 17
P9WM21/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
E2IBS4/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
Q9RSX7/48-231              ---PHVKAAAGVTAGLIALLWGQEVADQFLFGTR-LDGYGIEPRQVGTFWHVFTAPFLHAGFPHLIANTVPLAVLAFMTAVRSVSRFLVATFLIALIGGGLVWLLGRSG-----SVHLGASELVFGYLAYLLGVGWWERTPLSVVIAVIAFALYGGVLWGVLP---SNPAISWEAHLFGFIGGLVAAALLHRKVRR----
Q7NPH4/15-194              ------KSQAQILGGTVAAFWSIEIVDQVLFAGRYLDVFGIHPRDLDSLVNIFFAPFLHVGFGHLIANTVPFLVLGWLIMARSFKDFFWVTLIVTLVSGLGVWLFAPTN-----TVHLGASGVVFGYLGYLLLRGYFERSWQSVLVALGVGFLFGGALWGVLP---LQAGVSWQAHLFGFLGGVLAARWLT-PRR-----
L8ALH7/12-196              ----TLQSQFSIIVSFLAIFWLLEILDAFVFRGS-LDQFGIYPRSLEGLRGIVFAPFLHADFGHLIANSVPFVVLAWLVMLQEVSDFWIVTIITMVVGGLGVWLIAPPN-----TVTVGASILIFGYLGFLLFRGWFQKNLASIVLSIVVLVLYGSALWGLLP---GRAGVSWQGHLFGFIGGAIAAWLIAREKHYYS--
P74553/12-196              ----TLQSQFSIIVSFLAIFWLLEILDAFVFRGS-LDQFGIYPRSLEGLRGIVFAPFLHADFGHLIANSVPFVVLAWLVMLQEVSDFWIVTIITMVVGGLGVWLIAPPN-----TVTVGASILIFGYLGFLLFRGWFQKNLASIVLSIVVLVLYGSALWGLLP---GRAGVSWQGHLFGFIGGAIAAWLIAREKHYYS--
G0TIE3/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
P9WM20/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
P64816/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
A0A328GPP3/31-228          TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
A5U237/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
A0A0H3M5S6/31-228          TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
R4MCQ1/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
E2IBT0/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
R4M1F7/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
E2IBS8/31-228              TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
A0A2C5STF9/31-228          TKRPRWVVGGTTILTFVALLYLVELIDQ-LSGSR-LDVNGIRPLKTDGLWGVIFAPLLHANWHHLMANTIPLLVLGFLMTLAGLSRFVWATAIIWILGGLGTWLIGNVGSSCGPTDHIGASGLIFGWLAFLLVFGLFVRKGWDIVIGLVVLFVYGGILLGAMPVLGQCGGVSWQGHLSGAVAGVVAAYLLSAPERKARAL
#=GC scorecons             11133334434564566956554955961655560994499494446674575799699755499699679659965755645575934694763557966599664451111174659994779959679943947474335776566755689659594691113457899769959466956993764344632211
#=GC scorecons_70          ____________*___**_*___*__*__*_____**__**_*___*_*__*_*******___*********_**__*______*_*___*_*____****_***_________*___***_****_*_***__*_*_*____***__**__****_*_*_**______********_*___*_***_**____*_____
#=GC scorecons_80          _________________*_____*__*________**__**_*_____*_____**_***___**_**__*__**__*______*_*___*_*____**___**__________*___***_****_*_***__*_*_*____**____*___**__*_*__*______*****_**_*___*__**_____________
#=GC scorecons_90          _________________*_____*__*________**__**_*___________**_**____**_**__*__**___________*___*_______*___**______________***___**_*__**__*__________________**__*_*__*________**__**_*___*__**_____________
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