# STOCKHOLM 1.0
#=GF ID 1.20.120.1810/FF/000005
#=GF DE RNA polymerase sigma factor SigB
#=GF AC 1.20.120.1810/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 40.839
#=GS P06574/1-102      AC P06574
#=GS P06574/1-102      OS Bacillus subtilis subsp. subtilis str. 168
#=GS P06574/1-102      DE RNA polymerase sigma-B factor
#=GS P06574/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS P06574/1-102      DR GO; GO:0043620; 
#=GS Q9K5J6/1-102      AC Q9K5J6
#=GS Q9K5J6/1-102      OS Bacillus anthracis
#=GS Q9K5J6/1-102      DE RNA polymerase sigma-B factor
#=GS Q9K5J6/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus anthracis; 
#=GS Q9K5J6/1-102      DR GO; GO:0006352; GO:0016987; 
#=GS A0A0T8Q2T8/1-102  AC A0A0T8Q2T8
#=GS A0A0T8Q2T8/1-102  OS Streptococcus pneumoniae
#=GS A0A0T8Q2T8/1-102  DE RNA polymerase sigma factor RpoD
#=GS A0A0T8Q2T8/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A2X1VR83/1-102  AC A0A2X1VR83
#=GS A0A2X1VR83/1-102  OS Paenibacillus polymyxa
#=GS A0A2X1VR83/1-102  DE FliA/WhiG subfamily RNA polymerase sigma-28 subunit
#=GS A0A2X1VR83/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa; 
#=GS A0A410QX45/1-102  AC A0A410QX45
#=GS A0A410QX45/1-102  OS Bacillus sp. WR11
#=GS A0A410QX45/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A410QX45/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. WR11; 
#=GS U1Z2W6/1-102      AC U1Z2W6
#=GS U1Z2W6/1-102      OS Bacillus sp. EGD-AK10
#=GS U1Z2W6/1-102      DE RNA polymerase sigma factor SigB
#=GS U1Z2W6/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. EGD-AK10; 
#=GS A0A0P7H2Q6/1-102  AC A0A0P7H2Q6
#=GS A0A0P7H2Q6/1-102  OS Bacillus australimaris
#=GS A0A0P7H2Q6/1-102  DE RNA polymerase sigma-B factor
#=GS A0A0P7H2Q6/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus australimaris; 
#=GS A0A371UNP4/1-102  AC A0A371UNP4
#=GS A0A371UNP4/1-102  OS Bacillus sp. HMG
#=GS A0A371UNP4/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A371UNP4/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. HMG; 
#=GS A8FA74/1-102      AC A8FA74
#=GS A8FA74/1-102      OS Bacillus pumilus SAFR-032
#=GS A8FA74/1-102      DE RNA polymerase sigma-B factor
#=GS A8FA74/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS A0A0Q3W6L4/1-102  AC A0A0Q3W6L4
#=GS A0A0Q3W6L4/1-102  OS Bacillus sp. FJAT-21955
#=GS A0A0Q3W6L4/1-102  DE RNA polymerase sigma-B factor
#=GS A0A0Q3W6L4/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. FJAT-21955; 
#=GS A0A0B0QAB5/1-102  AC A0A0B0QAB5
#=GS A0A0B0QAB5/1-102  OS Bacillus altitudinis
#=GS A0A0B0QAB5/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A0B0QAB5/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus altitudinis complex; Bacillus altitudinis; 
#=GS A0A2T0CX47/1-102  AC A0A2T0CX47
#=GS A0A2T0CX47/1-102  OS Bacillus sp. MZGC1
#=GS A0A2T0CX47/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A2T0CX47/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. MZGC1; 
#=GS A0A1K2DUR6/1-102  AC A0A1K2DUR6
#=GS A0A1K2DUR6/1-102  OS Bacillus sp. ru9509.4
#=GS A0A1K2DUR6/1-102  DE RNA polymerase, sigma 37 subunit, RpsB/SigB
#=GS A0A1K2DUR6/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. ru9509.4; 
#=GS A0A3B0A959/1-103  AC A0A3B0A959
#=GS A0A3B0A959/1-103  OS Bacillus sp. S66
#=GS A0A3B0A959/1-103  DE RNA polymerase sigma factor SigB
#=GS A0A3B0A959/1-103  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. S66; 
#=GS A0A410KS65/1-102  AC A0A410KS65
#=GS A0A410KS65/1-102  OS Bacillus aerophilus
#=GS A0A410KS65/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A410KS65/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus altitudinis complex; Bacillus aerophilus; 
#=GS A0A1V9CD35/1-102  AC A0A1V9CD35
#=GS A0A1V9CD35/1-102  OS Bacillus stratosphericus
#=GS A0A1V9CD35/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A1V9CD35/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus altitudinis complex; Bacillus stratosphericus; 
#=GS B3Z2S1/1-102      AC B3Z2S1
#=GS B3Z2S1/1-102      OS Bacillus cereus NVH0597-99
#=GS B3Z2S1/1-102      DE RNA polymerase sigma-B factor
#=GS B3Z2S1/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; 
#=GS A0A243K7K2/1-103  AC A0A243K7K2
#=GS A0A243K7K2/1-103  OS Bacillus thuringiensis serovar iberica
#=GS A0A243K7K2/1-103  DE RNA polymerase sigma factor SigB
#=GS A0A243K7K2/1-103  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus thuringiensis; 
#=GS A0A3S8Q4V9/1-103  AC A0A3S8Q4V9
#=GS A0A3S8Q4V9/1-103  OS Bacillus wiedmannii bv. thuringiensis
#=GS A0A3S8Q4V9/1-103  DE RNA polymerase sigma factor SigB
#=GS A0A3S8Q4V9/1-103  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus wiedmannii; 
#=GS L8ACS3/1-102      AC L8ACS3
#=GS L8ACS3/1-102      OS Bacillus subtilis BEST7613
#=GS L8ACS3/1-102      DE RNA polymerase sigma factor SigB
#=GS L8ACS3/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS D4G5F1/1-102      AC D4G5F1
#=GS D4G5F1/1-102      OS Bacillus subtilis subsp. natto BEST195
#=GS D4G5F1/1-102      DE RNA polymerase sigma factor SigB
#=GS D4G5F1/1-102      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. natto; 
#=GS A0A199WB82/1-102  AC A0A199WB82
#=GS A0A199WB82/1-102  OS Bacillus subtilis subsp. subtilis
#=GS A0A199WB82/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A199WB82/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A063XHI4/1-102  AC A0A063XHI4
#=GS A0A063XHI4/1-102  OS Bacillus subtilis
#=GS A0A063XHI4/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A063XHI4/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A110GHX5/1-102  AC A0A110GHX5
#=GS A0A110GHX5/1-102  OS Streptococcus pneumoniae
#=GS A0A110GHX5/1-102  DE RNA polymerase sigma factor RpoD
#=GS A0A110GHX5/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS A0A1A6I8Z0/1-102  AC A0A1A6I8Z0
#=GS A0A1A6I8Z0/1-102  OS Bacillus pumilus
#=GS A0A1A6I8Z0/1-102  DE RNA polymerase sigma factor SigB
#=GS A0A1A6I8Z0/1-102  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus pumilus; 
#=GS J8ID58/1-103      AC J8ID58
#=GS J8ID58/1-103      OS Bacillus cereus VD166
#=GS J8ID58/1-103      DE RNA polymerase sigma-B factor
#=GS J8ID58/1-103      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; 
#=GS J8HIS3/1-103      AC J8HIS3
#=GS J8HIS3/1-103      OS Bacillus cereus VD045
#=GS J8HIS3/1-103      DE RNA polymerase sigma-B factor
#=GS J8HIS3/1-103      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; 
#=GS Q81H22/1-103      AC Q81H22
#=GS Q81H22/1-103      OS Bacillus cereus ATCC 14579
#=GS Q81H22/1-103      DE RNA polymerase sigma-B factor
#=GS Q81H22/1-103      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus cereus; 
#=GS A0A3Q9HWP2/1-103  AC A0A3Q9HWP2
#=GS A0A3Q9HWP2/1-103  OS Bacillus thuringiensis
#=GS A0A3Q9HWP2/1-103  DE RNA polymerase sigma factor SigB
#=GS A0A3Q9HWP2/1-103  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group; Bacillus thuringiensis; 
#=GF SQ 29
P06574/1-102              -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
Q9K5J6/1-102              -MEIQSQPTNLTKEDVIKLIAEFQQNQCGEAQERLVDHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
A0A0T8Q2T8/1-102          -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A2X1VR83/1-102          -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A410QX45/1-102          -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
U1Z2W6/1-102              -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A0P7H2Q6/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A371UNP4/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A8FA74/1-102              -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A0Q3W6L4/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A0B0QAB5/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A2T0CX47/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A1K2DUR6/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A3B0A959/1-103          MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
A0A410KS65/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A1V9CD35/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
B3Z2S1/1-102              -MEIQSQPTNLTKEDVIKLIAEFQQNQCGEAQERLVDHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
A0A243K7K2/1-103          MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
A0A3S8Q4V9/1-103          MMEIQSQPTNLAKEDVIKLIADFQQNQCDEAQERLVHHYKNLVHSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
L8ACS3/1-102              -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
D4G5F1/1-102              -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A199WB82/1-102          -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A063XHI4/1-102          -MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKT
A0A110GHX5/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
A0A1A6I8Z0/1-102          -MTQPSKTMKLTKDEVDRLIQSYQSNQDEQAQLTLVECYTNLVDMLAKKYSKGKSFHEDLRQVGMIGLLGAIKRYDPLVGKSFEAFAIPTIIGEIKRFLRDKT
J8ID58/1-103              MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
J8HIS3/1-103              MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
Q81H22/1-103              MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
A0A3Q9HWP2/1-103          MMEIQSQPTNLTKEDVIKLIADFQQNQCDEAQERLVEHYKNLVYSIAYRYSKGGPMHEDIIQVGMLGLLGAIRRYDYSIGNAFEPFAIPTIVGEIKKYLRDKT
#=GC scorecons            0954596666989779479945794694669955995495999556947999956599964999969999997999447966996999999799997799999
#=GC scorecons_70         _*___**_*_******_***__**_**_****__**__*_***__**_*****___****_***************__**__**_******************
#=GC scorecons_80         _*___*____***__*__**__**__*___**__**__*_***___*__****___***__****_******_***___*__**_******_****_******
#=GC scorecons_90         _*___*____***__*__**___*__*___**__**__*_***___*__****___***__****_******_***___*__**_******_****__*****
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