# STOCKHOLM 1.0 #=GF ID 1.10.10.1330/FF/000001 #=GF DE RNA polymerase sigma-54 factor #=GF AC 1.10.10.1330/FF/000001 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 93.037 #=GS P24255/121-193 AC P24255 #=GS P24255/121-193 OS Escherichia coli K-12 #=GS P24255/121-193 DE RNA polymerase sigma-54 factor #=GS P24255/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS P24255/121-193 DR GO; GO:0000976; GO:0001216; GO:0032993; #=GS Q9KP49/133-204 AC Q9KP49 #=GS Q9KP49/133-204 OS Vibrio cholerae O1 biovar El Tor str. N16961 #=GS Q9KP49/133-204 DE RNA polymerase sigma-54 factor #=GS Q9KP49/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS Q9KP49/133-204 DR GO; GO:0006352; GO:0016987; #=GS Q74BZ1/129-198 AC Q74BZ1 #=GS Q74BZ1/129-198 OS Geobacter sulfurreducens PCA #=GS Q74BZ1/129-198 DE RNA polymerase sigma-54 factor #=GS Q74BZ1/129-198 DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; #=GS Q74BZ1/129-198 DR GO; GO:0006355; #=GS P0A171/140-213 AC P0A171 #=GS P0A171/140-213 OS Pseudomonas putida KT2440 #=GS P0A171/140-213 DE RNA polymerase sigma-54 factor #=GS P0A171/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; #=GS P0A171/140-213 DR GO; GO:0000976; GO:0001216; GO:0032993; GO:0042802; GO:0045893; #=GS P49988/140-213 AC P49988 #=GS P49988/140-213 OS Pseudomonas aeruginosa PAO1 #=GS P49988/140-213 DE RNA polymerase sigma-54 factor #=GS P49988/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS P49988/140-213 DR GO; GO:0000976; GO:0001216; GO:0032993; GO:1900191; #=GS Q9PDH1/105-177 AC Q9PDH1 #=GS Q9PDH1/105-177 OS Xylella fastidiosa 9a5c #=GS Q9PDH1/105-177 DE RNA polymerase sigma-54 factor #=GS Q9PDH1/105-177 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella; Xylella fastidiosa; #=GS Q9PDH1/105-177 DR GO; GO:0045893; #=GS W0FUB0/121-193 AC W0FUB0 #=GS W0FUB0/121-193 OS uncultured bacterium Contig357 #=GS W0FUB0/121-193 DE RNA polymerase, sigma 54 (Sigma N) factor #=GS W0FUB0/121-193 DR ORG; Bacteria; uncultured bacterium Contig357; #=GS A0A0M9J523/121-193 AC A0A0M9J523 #=GS A0A0M9J523/121-193 OS Achromobacter sp. #=GS A0A0M9J523/121-193 DE RNA polymerase sigma-54 factor #=GS A0A0M9J523/121-193 DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter; Achromobacter sp.; #=GS Q60AV3/129-203 AC Q60AV3 #=GS Q60AV3/129-203 OS Methylococcus capsulatus str. Bath #=GS Q60AV3/129-203 DE RNA polymerase sigma-54 factor #=GS Q60AV3/129-203 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus; Methylococcus capsulatus; #=GS Q60AV3/129-203 DR GO; GO:0006352; GO:0016987; #=GS A0A335ET76/140-213 AC A0A335ET76 #=GS A0A335ET76/140-213 OS Acinetobacter baumannii #=GS A0A335ET76/140-213 DE RNA polymerase sigma-54 factor #=GS A0A335ET76/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; #=GS A0A0G3QLK0/121-193 AC A0A0G3QLK0 #=GS A0A0G3QLK0/121-193 OS Phytobacter ursingii #=GS A0A0G3QLK0/121-193 DE RNA polymerase sigma-54 factor #=GS A0A0G3QLK0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Phytobacter; Phytobacter ursingii; #=GS A0A157V291/140-213 AC A0A157V291 #=GS A0A157V291/140-213 OS Enterobacter cloacae #=GS A0A157V291/140-213 DE RNA polymerase sigma-54 factor #=GS A0A157V291/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; #=GS A0A236PCR2/121-193 AC A0A236PCR2 #=GS A0A236PCR2/121-193 OS Shigella sonnei #=GS A0A236PCR2/121-193 DE RNA polymerase sigma-54 factor #=GS A0A236PCR2/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sonnei; #=GS A0A3R0DFD3/121-193 AC A0A3R0DFD3 #=GS A0A3R0DFD3/121-193 OS Salmonella enterica #=GS A0A3R0DFD3/121-193 DE RNA polymerase sigma-54 factor #=GS A0A3R0DFD3/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; #=GS E3G0U8/121-193 AC E3G0U8 #=GS E3G0U8/121-193 OS [Enterobacter] lignolyticus SCF1 #=GS E3G0U8/121-193 DE RNA polymerase sigma-54 factor #=GS E3G0U8/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pluralibacter; [Enterobacter] lignolyticus; #=GS A0A1X0XEP2/121-193 AC A0A1X0XEP2 #=GS A0A1X0XEP2/121-193 OS Kluyvera intermedia #=GS A0A1X0XEP2/121-193 DE RNA polymerase sigma-54 factor #=GS A0A1X0XEP2/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera intermedia; #=GS I2B4P9/121-193 AC I2B4P9 #=GS I2B4P9/121-193 OS Shimwellia blattae DSM 4481 = NBRC 105725 #=GS I2B4P9/121-193 DE RNA polymerase sigma-54 factor #=GS I2B4P9/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shimwellia; Shimwellia blattae; #=GS A0A3R9F1P7/121-193 AC A0A3R9F1P7 #=GS A0A3R9F1P7/121-193 OS Atlantibacter subterranea #=GS A0A3R9F1P7/121-193 DE RNA polymerase sigma-54 factor #=GS A0A3R9F1P7/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; Atlantibacter subterranea; #=GS A0A0J8YBB8/121-193 AC A0A0J8YBB8 #=GS A0A0J8YBB8/121-193 OS Franconibacter pulveris #=GS A0A0J8YBB8/121-193 DE RNA polymerase sigma-54 factor #=GS A0A0J8YBB8/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Franconibacter; Franconibacter pulveris; #=GS A0A1S1C2D9/140-213 AC A0A1S1C2D9 #=GS A0A1S1C2D9/140-213 OS Pseudomonas sp. HMSC059F05 #=GS A0A1S1C2D9/140-213 DE RNA polymerase sigma-54 factor #=GS A0A1S1C2D9/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC059F05; #=GS A0A1F0IM94/140-213 AC A0A1F0IM94 #=GS A0A1F0IM94/140-213 OS Pseudomonas sp. HMSC065H01 #=GS A0A1F0IM94/140-213 DE RNA polymerase sigma-54 factor #=GS A0A1F0IM94/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; #=GS A0A448BRY2/140-213 AC A0A448BRY2 #=GS A0A448BRY2/140-213 OS Pseudomonas fluorescens #=GS A0A448BRY2/140-213 DE RNA polymerase sigma-54 factor #=GS A0A448BRY2/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; #=GS A0A2V2TMV1/140-213 AC A0A2V2TMV1 #=GS A0A2V2TMV1/140-213 OS Pseudomonas sp. RW410 #=GS A0A2V2TMV1/140-213 DE RNA polymerase sigma-54 factor #=GS A0A2V2TMV1/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; #=GS A0A173HJZ8/140-213 AC A0A173HJZ8 #=GS A0A173HJZ8/140-213 OS Pseudomonas sp. JY-Q #=GS A0A173HJZ8/140-213 DE RNA polymerase sigma-54 factor #=GS A0A173HJZ8/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. JY-Q; #=GS A0A2K4LQE8/140-213 AC A0A2K4LQE8 #=GS A0A2K4LQE8/140-213 OS Pseudomonas sp. FW305-E2 #=GS A0A2K4LQE8/140-213 DE RNA polymerase sigma-54 factor #=GS A0A2K4LQE8/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. FW305-E2; #=GS A0A2L1IBD4/140-213 AC A0A2L1IBD4 #=GS A0A2L1IBD4/140-213 OS Pseudomonas sp. SWI36 #=GS A0A2L1IBD4/140-213 DE RNA polymerase sigma-54 factor #=GS A0A2L1IBD4/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. SWI36; #=GS A0A2I0C443/140-213 AC A0A2I0C443 #=GS A0A2I0C443/140-213 OS Pseudomonas hunanensis #=GS A0A2I0C443/140-213 DE RNA polymerase sigma-54 factor #=GS A0A2I0C443/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas hunanensis; #=GS A0A2V4FK52/140-213 AC A0A2V4FK52 #=GS A0A2V4FK52/140-213 OS Pseudomonas sp. SMT-1 #=GS A0A2V4FK52/140-213 DE RNA polymerase sigma-54 factor #=GS A0A2V4FK52/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. SMT-1; #=GS A0A427H1Z4/140-213 AC A0A427H1Z4 #=GS A0A427H1Z4/140-213 OS Pseudomonas sp. p99-361 #=GS A0A427H1Z4/140-213 DE RNA polymerase sigma-54 factor #=GS A0A427H1Z4/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. p99-361; #=GS A0A0S4IBG4/140-213 AC A0A0S4IBG4 #=GS A0A0S4IBG4/140-213 OS Pseudomonas sp. URMO17WK12:I11 #=GS A0A0S4IBG4/140-213 DE RNA polymerase sigma-54 factor #=GS A0A0S4IBG4/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. URMO17WK12:I11; #=GS A0A089WHD6/140-213 AC A0A089WHD6 #=GS A0A089WHD6/140-213 OS Pseudomonas cremoricolorata #=GS A0A089WHD6/140-213 DE RNA polymerase sigma-54 factor #=GS A0A089WHD6/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas cremoricolorata; #=GS A0A427G514/140-213 AC A0A427G514 #=GS A0A427G514/140-213 OS Pseudomonas sp. p106 #=GS A0A427G514/140-213 DE RNA polymerase sigma-54 factor #=GS A0A427G514/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. p106; #=GS A0A285NZ89/148-221 AC A0A285NZ89 #=GS A0A285NZ89/148-221 OS Pseudomonas sp. URIL14HWK12:I9 #=GS A0A285NZ89/148-221 DE RNA polymerase sigma-54 factor #=GS A0A285NZ89/148-221 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. URIL14HWK12:I9; #=GS A0A3S8UQ50/140-213 AC A0A3S8UQ50 #=GS A0A3S8UQ50/140-213 OS Pseudomonas entomophila #=GS A0A3S8UQ50/140-213 DE RNA polymerase sigma-54 factor #=GS A0A3S8UQ50/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas entomophila; #=GS A0A236RJL6/121-193 AC A0A236RJL6 #=GS A0A236RJL6/121-193 OS Shigella boydii #=GS A0A236RJL6/121-193 DE RNA polymerase sigma-54 factor #=GS A0A236RJL6/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella boydii; #=GS I6GJW1/121-193 AC I6GJW1 #=GS I6GJW1/121-193 OS Shigella flexneri 1235-66 #=GS I6GJW1/121-193 DE RNA polymerase sigma-54 factor #=GS I6GJW1/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS H5UZI1/121-193 AC H5UZI1 #=GS H5UZI1/121-193 OS Atlantibacter hermannii NBRC 105704 #=GS H5UZI1/121-193 DE RNA polymerase sigma-54 factor #=GS H5UZI1/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; Atlantibacter hermannii; #=GS A0A089PID0/121-193 AC A0A089PID0 #=GS A0A089PID0/121-193 OS Pluralibacter gergoviae #=GS A0A089PID0/121-193 DE RNA polymerase sigma-54 factor #=GS A0A089PID0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pluralibacter; Pluralibacter gergoviae; #=GS V6ALF0/140-213 AC V6ALF0 #=GS V6ALF0/140-213 OS Pseudomonas aeruginosa MH27 #=GS V6ALF0/140-213 DE RNA polymerase sigma-54 factor #=GS V6ALF0/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS W1MRS8/140-213 AC W1MRS8 #=GS W1MRS8/140-213 OS Pseudomonas aeruginosa VRFPA03 #=GS W1MRS8/140-213 DE RNA polymerase sigma-54 factor #=GS W1MRS8/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A0C6FAA1/140-213 AC A0A0C6FAA1 #=GS A0A0C6FAA1/140-213 OS Pseudomonas aeruginosa #=GS A0A0C6FAA1/140-213 DE RNA polymerase sigma-54 factor #=GS A0A0C6FAA1/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A0H2ZGR9/140-213 AC A0A0H2ZGR9 #=GS A0A0H2ZGR9/140-213 OS Pseudomonas aeruginosa UCBPP-PA14 #=GS A0A0H2ZGR9/140-213 DE RNA polymerase sigma-54 factor #=GS A0A0H2ZGR9/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS P0A172/140-213 AC P0A172 #=GS P0A172/140-213 OS Pseudomonas putida #=GS P0A172/140-213 DE RNA polymerase sigma-54 factor #=GS P0A172/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; #=GS A0A160J456/140-213 AC A0A160J456 #=GS A0A160J456/140-213 OS Pseudomonas putida B6-2 #=GS A0A160J456/140-213 DE RNA polymerase sigma-54 factor #=GS A0A160J456/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; #=GS E5G6E8/140-213 AC E5G6E8 #=GS E5G6E8/140-213 OS Pseudomonas putida #=GS E5G6E8/140-213 DE RNA polymerase sigma-54 factor #=GS E5G6E8/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; #=GS A5VZ42/140-213 AC A5VZ42 #=GS A5VZ42/140-213 OS Pseudomonas putida F1 #=GS A5VZ42/140-213 DE RNA polymerase sigma-54 factor #=GS A5VZ42/140-213 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; #=GS G0F2J9/121-193 AC G0F2J9 #=GS G0F2J9/121-193 OS Escherichia coli UMNF18 #=GS G0F2J9/121-193 DE RNA polymerase sigma-54 factor #=GS G0F2J9/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS M9H3Y1/121-193 AC M9H3Y1 #=GS M9H3Y1/121-193 OS Escherichia coli MP021561.2 #=GS M9H3Y1/121-193 DE RNA polymerase sigma-54 factor #=GS M9H3Y1/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS F4SNS9/121-193 AC F4SNS9 #=GS F4SNS9/121-193 OS Escherichia coli H736 #=GS F4SNS9/121-193 DE RNA polymerase sigma-54 factor #=GS F4SNS9/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A070T785/121-193 AC A0A070T785 #=GS A0A070T785/121-193 OS Escherichia coli 2-210-07_S3_C3 #=GS A0A070T785/121-193 DE RNA polymerase sigma-54 factor #=GS A0A070T785/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A069XR56/121-193 AC A0A069XR56 #=GS A0A069XR56/121-193 OS Escherichia coli 3-373-03_S4_C2 #=GS A0A069XR56/121-193 DE RNA polymerase sigma-54 factor #=GS A0A069XR56/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS Q0P6L7/121-193 AC Q0P6L7 #=GS Q0P6L7/121-193 OS Escherichia coli #=GS Q0P6L7/121-193 DE RNA polymerase sigma-54 factor #=GS Q0P6L7/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS I2X6R7/121-193 AC I2X6R7 #=GS I2X6R7/121-193 OS Escherichia coli 2.3916 #=GS I2X6R7/121-193 DE RNA polymerase sigma-54 factor #=GS I2X6R7/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS H4UPR2/121-193 AC H4UPR2 #=GS H4UPR2/121-193 OS Escherichia coli DEC6A #=GS H4UPR2/121-193 DE RNA polymerase sigma-54 factor #=GS H4UPR2/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A1X3JCS0/121-193 AC A0A1X3JCS0 #=GS A0A1X3JCS0/121-193 OS Escherichia coli H386 #=GS A0A1X3JCS0/121-193 DE RNA polymerase sigma-54 factor #=GS A0A1X3JCS0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS T9CL65/121-193 AC T9CL65 #=GS T9CL65/121-193 OS Escherichia coli UMEA 3212-1 #=GS T9CL65/121-193 DE RNA polymerase sigma-54 factor #=GS T9CL65/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A0E1M1Z2/121-193 AC A0A0E1M1Z2 #=GS A0A0E1M1Z2/121-193 OS Escherichia coli 1303 #=GS A0A0E1M1Z2/121-193 DE RNA polymerase sigma-54 factor #=GS A0A0E1M1Z2/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS E3PKQ0/121-193 AC E3PKQ0 #=GS E3PKQ0/121-193 OS Escherichia coli ETEC H10407 #=GS E3PKQ0/121-193 DE RNA polymerase sigma-54 factor #=GS E3PKQ0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A070V9T2/121-193 AC A0A070V9T2 #=GS A0A070V9T2/121-193 OS Escherichia coli 2-177-06_S3_C2 #=GS A0A070V9T2/121-193 DE RNA polymerase sigma-54 factor #=GS A0A070V9T2/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A2S4N0S0/121-193 AC A0A2S4N0S0 #=GS A0A2S4N0S0/121-193 OS Shigella flexneri #=GS A0A2S4N0S0/121-193 DE RNA polymerase sigma-54 factor #=GS A0A2S4N0S0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS D2A8C4/121-193 AC D2A8C4 #=GS D2A8C4/121-193 OS Shigella flexneri 2002017 #=GS D2A8C4/121-193 DE RNA polymerase sigma-54 factor #=GS D2A8C4/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS F5N7M5/121-193 AC F5N7M5 #=GS F5N7M5/121-193 OS Shigella flexneri VA-6 #=GS F5N7M5/121-193 DE RNA polymerase sigma-54 factor #=GS F5N7M5/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS A0A3R0M0I4/121-193 AC A0A3R0M0I4 #=GS A0A3R0M0I4/121-193 OS Shigella flexneri #=GS A0A3R0M0I4/121-193 DE RNA polymerase sigma-54 factor #=GS A0A3R0M0I4/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS A0A2Y3CKL4/121-193 AC A0A2Y3CKL4 #=GS A0A2Y3CKL4/121-193 OS Shigella flexneri 2a #=GS A0A2Y3CKL4/121-193 DE RNA polymerase sigma-54 factor #=GS A0A2Y3CKL4/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS A0A200LKY0/121-193 AC A0A200LKY0 #=GS A0A200LKY0/121-193 OS Shigella sonnei #=GS A0A200LKY0/121-193 DE RNA polymerase sigma-54 factor #=GS A0A200LKY0/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sonnei; #=GS A0A127GPZ4/121-193 AC A0A127GPZ4 #=GS A0A127GPZ4/121-193 OS Shigella flexneri 4c #=GS A0A127GPZ4/121-193 DE RNA polymerase sigma-54 factor #=GS A0A127GPZ4/121-193 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; #=GS A0A0X1L3Q8/133-204 AC A0A0X1L3Q8 #=GS A0A0X1L3Q8/133-204 OS Vibrio cholerae MO10 #=GS A0A0X1L3Q8/133-204 DE RNA polymerase sigma-54 factor #=GS A0A0X1L3Q8/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS D7HFG5/133-204 AC D7HFG5 #=GS D7HFG5/133-204 OS Vibrio cholerae RC385 #=GS D7HFG5/133-204 DE RNA polymerase sigma-54 factor #=GS D7HFG5/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS C2HX11/133-204 AC C2HX11 #=GS C2HX11/133-204 OS Vibrio albensis VL426 #=GS C2HX11/133-204 DE RNA polymerase sigma-54 factor #=GS C2HX11/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS A0A0H3AJL7/133-204 AC A0A0H3AJL7 #=GS A0A0H3AJL7/133-204 OS Vibrio cholerae O395 #=GS A0A0H3AJL7/133-204 DE RNA polymerase sigma-54 factor #=GS A0A0H3AJL7/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS A0A0K9URM2/133-204 AC A0A0K9URM2 #=GS A0A0K9URM2/133-204 OS Vibrio cholerae 2740-80 #=GS A0A0K9URM2/133-204 DE RNA polymerase sigma-54 factor #=GS A0A0K9URM2/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS A0A0H3Q430/133-204 AC A0A0H3Q430 #=GS A0A0H3Q430/133-204 OS Vibrio cholerae B33 #=GS A0A0H3Q430/133-204 DE RNA polymerase sigma-54 factor #=GS A0A0H3Q430/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS A0A086SNJ1/133-204 AC A0A086SNJ1 #=GS A0A086SNJ1/133-204 OS Vibrio cholerae #=GS A0A086SNJ1/133-204 DE RNA polymerase sigma-54 factor #=GS A0A086SNJ1/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GS C3LRJ2/133-204 AC C3LRJ2 #=GS C3LRJ2/133-204 OS Vibrio cholerae M66-2 #=GS C3LRJ2/133-204 DE RNA polymerase sigma-54 factor #=GS C3LRJ2/133-204 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; #=GF SQ 74 P24255/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK Q9KP49/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- Q74BZ1/129-198 ADHLMWQLNMTKLSDEEARASAEIIGNIDEDGYLRATVEEVALA-----CSVSESVAESALKKIQEFDPMGVGAR P0A171/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR P49988/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR Q9PDH1/105-177 TDHLLWQLHLSPLSARDYQIGTVLIDAIEEDGYLRELLSTLTATLAP--LSVDESELLPVLRHIQSFDPTGVAAR W0FUB0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A0M9J523/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK Q60AV3/129-203 QDYLLWQMELTPFTERDHAIATAIIDAVDDDGYLDATVEEITQGLSSQLENLEQDEVRAVLHRIQNFDPPGIAAE A0A335ET76/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A0G3QLK0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGD--EEIGLDEVEAVLKRIQRFDPVGVAAR A0A157V291/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A236PCR2/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A3R0DFD3/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK E3G0U8/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVTLDDILESMGD--EEIGLDEVEAVLKRIQRFDPVGVAAR A0A1X0XEP2/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGD--EEIGLDEVEAVLKRIQRFDPVGVAAR I2B4P9/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDIRESTGD--DEITIEEVEAVLKRIQRFDPVGVAAK A0A3R9F1P7/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLEDILESVGD--DETDIEEVEAVLKRIQRFDPVGVAAR A0A0J8YBB8/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVALEDILESMGD--EEISLDEVEAVLKRVQRFDPVGVAAR A0A1S1C2D9/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A1F0IM94/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A448BRY2/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A2V2TMV1/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A173HJZ8/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A2K4LQE8/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A2L1IBD4/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A2I0C443/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A2V4FK52/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A427H1Z4/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVAAR A0A0S4IBG4/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINNQGYLEDSLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A089WHD6/140-213 QSHLLWQLNLAPMSDVDRMIAVTLIDSINPQGYLEDSLDEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGIAAR A0A427G514/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTIEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A285NZ89/148-221 QSHLLWQLNLVPMSDNDRLIAVTLIDSINDQGYLEATLEEICDGFDPE-LDIELDEIEAVLHRIQQFEPAGVAAR A0A3S8UQ50/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGIGAR A0A236RJL6/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK I6GJW1/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK H5UZI1/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLEDILESIGN--DETDIEEVEAVLKRIQRFDPVGVAAR A0A089PID0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTIPIEDILESIGD--ADIDIEEVEAVLKRIQRFDPIGVAAK V6ALF0/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR W1MRS8/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A0C6FAA1/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR A0A0H2ZGR9/140-213 HSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPE-LDVELDEVEVVLRRIQQLEPAGIGAR P0A172/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A0A160J456/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR E5G6E8/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR A5VZ42/140-213 QSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEICAGFDPE-LDIELDEVEAVLHRIQQFEPAGVGAR G0F2J9/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK M9H3Y1/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK F4SNS9/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A070T785/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A069XR56/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK Q0P6L7/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK I2X6R7/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK H4UPR2/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A1X3JCS0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK T9CL65/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A0E1M1Z2/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK E3PKQ0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A070V9T2/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A2S4N0S0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK D2A8C4/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK F5N7M5/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A3R0M0I4/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A2Y3CKL4/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A200LKY0/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A127GPZ4/121-193 QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESMGD--EEIDIDEVEAVLKRIQRFDPVGVAAK A0A0X1L3Q8/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- D7HFG5/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- C2HX11/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- A0A0H3AJL7/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- A0A0K9URM2/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- A0A0H3Q430/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- A0A086SNJ1/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- C3LRJ2/133-204 QDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRS--DDIELDEIEAVRKRIQQFDPFGVAS- #=GC scorecons 767959965868588688488556786765499954588784554441046765887868768896779497675 #=GC scorecons_70 *_**_***_***_*****_**__***_**__***___****_________***_*******_***_***_****_ #=GC scorecons_80 *__*_**__*_*_**_**_**___**_*___***___**_*__________*__****_*__***_***_**_*_ #=GC scorecons_90 ___*_**__*_*_**_**_**____*_____***___**_*______________*_*_*__***___*_*____ //