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CATH Superfamily 3.90.940.10

RNA polymerase subunit, RPB6/omega

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: DNA-directed RNA polymerase subunit omega

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 2 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
 420 P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI) P0A800 (/IPI)
(410 more)
DNA-directed 5'-3' RNA polymerase activity GO:0003899
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
 15 Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS)
(5 more)

There are 2 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein-containing complex assembly GO:0065003
The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex.
 420 P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA)
(410 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
 15 Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS) Q9KNM3 (/ISS)
(5 more)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 420 P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA) P0A800 (/IDA)
(410 more)
RNA polymerase complex GO:0030880
Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits.
 420 P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP) P0A800 (/IMP)
(410 more)