# STOCKHOLM 1.0
#=GF ID 3.90.76.10/FF/000007
#=GF DE Dipeptide ABC transporter periplasmic dipeptide-binding protein
#=GF AC 3.90.76.10/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 97.048
#=GS Q48HF4/48-214      AC Q48HF4
#=GS Q48HF4/48-214      OS Pseudomonas savastanoi pv. phaseolicola 1448A
#=GS Q48HF4/48-214      DE Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative
#=GS Q48HF4/48-214      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 2; Pseudomonas savastanoi; 
#=GS Q48HF4/48-214      DR GO; GO:0015833; GO:0042626; GO:1904680; 
#=GS Q9X0N4/35-182      AC Q9X0N4
#=GS Q9X0N4/35-182      OS Thermotoga maritima MSB8
#=GS Q9X0N4/35-182      DE Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
#=GS Q9X0N4/35-182      DR ORG; Bacteria; Thermotogae; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga; Thermotoga maritima; 
#=GS Q8ZV97/63-205      AC Q8ZV97
#=GS Q8ZV97/63-205      OS Pyrobaculum aerophilum str. IM2
#=GS Q8ZV97/63-205      DE Dipeptide binding protein
#=GS Q8ZV97/63-205      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GS B1L484/56-190      AC B1L484
#=GS B1L484/56-190      OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L484/56-190      DE ABC-type dipeptide transport system, periplasmic component
#=GS B1L484/56-190      DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS Q89D29/61-231      AC Q89D29
#=GS Q89D29/61-231      OS Bradyrhizobium diazoefficiens USDA 110
#=GS Q89D29/61-231      DE Blr7616 protein
#=GS Q89D29/61-231      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS Q89PZ3/45-215      AC Q89PZ3
#=GS Q89PZ3/45-215      OS Bradyrhizobium diazoefficiens USDA 110
#=GS Q89PZ3/45-215      DE ABC transporter substrate-binding protein
#=GS Q89PZ3/45-215      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS B1L5E6/28-178      AC B1L5E6
#=GS B1L5E6/28-178      OS Candidatus Korarchaeum cryptofilum OPF8
#=GS B1L5E6/28-178      DE ABC-type dipeptide transport system, periplasmic component
#=GS B1L5E6/28-178      DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; 
#=GS G7VCV7/81-218      AC G7VCV7
#=GS G7VCV7/81-218      OS Pyrobaculum ferrireducens
#=GS G7VCV7/81-218      DE Dipeptide binding protein
#=GS G7VCV7/81-218      DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum ferrireducens; 
#=GS A4Z277/50-221      AC A4Z277
#=GS A4Z277/50-221      OS Bradyrhizobium sp. ORS 278
#=GS A4Z277/50-221      DE Putative ABC transporter, periplasmic binding protein
#=GS A4Z277/50-221      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. ORS 278; 
#=GS G7D397/50-221      AC G7D397
#=GS G7D397/50-221      OS Bradyrhizobium japonicum USDA 6
#=GS G7D397/50-221      DE Uncharacterized protein
#=GS G7D397/50-221      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A1B9YFR8/45-215  AC A0A1B9YFR8
#=GS A0A1B9YFR8/45-215  OS Bradyrhizobium sp. LMTR 3
#=GS A0A1B9YFR8/45-215  DE ABC transporter substrate-binding protein
#=GS A0A1B9YFR8/45-215  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. LMTR 3; 
#=GS I0GAV4/46-215      AC I0GAV4
#=GS I0GAV4/46-215      OS Bradyrhizobium sp. S23321
#=GS I0GAV4/46-215      DE ABC transporter substrate-binding protein
#=GS I0GAV4/46-215      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. S23321; 
#=GS A0A1X0NA09/48-214  AC A0A1X0NA09
#=GS A0A1X0NA09/48-214  OS Pseudomonas floridensis
#=GS A0A1X0NA09/48-214  DE ABC transporter substrate-binding protein
#=GS A0A1X0NA09/48-214  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas floridensis; 
#=GS A0A1E3XWA0/48-214  AC A0A1E3XWA0
#=GS A0A1E3XWA0/48-214  OS Pseudomonas sp. BDAL1
#=GS A0A1E3XWA0/48-214  DE ABC transporter substrate-binding protein
#=GS A0A1E3XWA0/48-214  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. BDAL1; 
#=GS Q880C3/48-214      AC Q880C3
#=GS Q880C3/48-214      OS Pseudomonas syringae pv. tomato str. DC3000
#=GS Q880C3/48-214      DE Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative
#=GS Q880C3/48-214      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 3; 
#=GS Q880C3/48-214      DR GO; GO:0015833; GO:0042626; GO:1904680; 
#=GS W0H3W3/48-214      AC W0H3W3
#=GS W0H3W3/48-214      OS Pseudomonas cichorii JBC1
#=GS W0H3W3/48-214      DE Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative
#=GS W0H3W3/48-214      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas cichorii; 
#=GS A0A0N0W5A5/48-214  AC A0A0N0W5A5
#=GS A0A0N0W5A5/48-214  OS Pseudomonas amygdali pv. mellea
#=GS A0A0N0W5A5/48-214  DE Dipeptide ABC transporter
#=GS A0A0N0W5A5/48-214  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 2; Pseudomonas amygdali; 
#=GS A0A0E3VTE8/61-231  AC A0A0E3VTE8
#=GS A0A0E3VTE8/61-231  OS Bradyrhizobium diazoefficiens
#=GS A0A0E3VTE8/61-231  DE Uncharacterized protein
#=GS A0A0E3VTE8/61-231  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A0A2A6MQX0/61-231  AC A0A2A6MQX0
#=GS A0A2A6MQX0/61-231  OS Bradyrhizobium diazoefficiens
#=GS A0A2A6MQX0/61-231  DE ABC transporter substrate-binding protein
#=GS A0A2A6MQX0/61-231  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A0A2A6N7E2/45-215  AC A0A2A6N7E2
#=GS A0A2A6N7E2/45-215  OS Bradyrhizobium diazoefficiens
#=GS A0A2A6N7E2/45-215  DE ABC transporter substrate-binding protein
#=GS A0A2A6N7E2/45-215  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A4YP43/45-215      AC A4YP43
#=GS A4YP43/45-215      OS Bradyrhizobium sp. ORS 278
#=GS A4YP43/45-215      DE Putative ABC transporter substrate-binding protein
#=GS A4YP43/45-215      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. ORS 278; 
#=GS G7DQI3/45-215      AC G7DQI3
#=GS G7DQI3/45-215      OS Bradyrhizobium japonicum USDA 6
#=GS G7DQI3/45-215      DE ABC transporter substrate-binding protein
#=GS G7DQI3/45-215      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A0Q0CX14/48-214  AC A0A0Q0CX14
#=GS A0A0Q0CX14/48-214  OS Pseudomonas syringae pv. tomato
#=GS A0A0Q0CX14/48-214  DE Putative Dipeptide ABC transporter, periplasmic dipeptide-binding protein
#=GS A0A0Q0CX14/48-214  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 3; 
#=GS A0A0P9QD56/48-214  AC A0A0P9QD56
#=GS A0A0P9QD56/48-214  OS Pseudomonas amygdali pv. eriobotryae
#=GS A0A0P9QD56/48-214  DE Dipeptide ABC transporter periplasmic dipeptide-binding protein
#=GS A0A0P9QD56/48-214  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 2; Pseudomonas amygdali; 
#=GF SQ 24
Q48HF4/48-214              SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIPALAERWEISPDRMRLTFHLRPGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTADNVSKLMRAEGPSTFVLDLPKATDPMLVLNTLATSPSAFVIDRLTALQHAKGDDLGA-AWLTTNTAGSGAF
Q9X0N4/35-182              TLDPAN-CYDYFSSNILQNVMVGLVDYE----------IGTSVLKPVLAERWEVDETGTVYTFYLRKDAKFEDGTPIDAHVFKYSFDRVMKLNGDPAFLLS-------DVVEKTEVVDDYTFRVTLKYPFS--AFVSVLGYTVA-YPVNPKVYPADSFYEGIPS---------ASGPY
Q8ZV97/63-205              ---PAN-AYDFFTWEVLYNTMAGLVRYR----------PGTTELEPDLALSWTALDGGRVWVFKLRPNLKFCDGTPLTAQDVKRSIERVMKINGDPAWLVT-------DFVERVEAPNETAVVFYLKKPVS--YFLALLATPPY-FPVHPKYAPDKVDSDQTAG---------GAG--
B1L484/56-190              ------------TWEVLSNVGEGLYKYE----------PGTDKLIPGIAERYEVKDGGSTWVFYLKKNVKFCDGTPVKAQDVVRSIKRVMKINRDPAWLVT-------DFVEDVVALDDYTVQFKLKKPVS--YFLALVATPPY-FPVHPSYPEDKIVSDATWG---------GAG--
Q89D29/61-231              -LDMQGVGSNQTVNGLSWNCYDRLLTYASKTLPDGTVSYDREKLAPELAESWEVAADGMSCTFRLRKDAKFHDGAPVTARDVKWSFDRAVKVGGFPTFQMSAGSLEK---PEQFVVVDDHTFRIDYVRKDK--MLLFNVAVVVP-FIINSELAKKNATPEDPWALAWLKTNEAGGGAY
Q89PZ3/45-215              TLDPNIPGSTRESFALSMSTYDRLVAFGRKQL-NGKWVFDLDTITGELAESYDVSPDGLKLTFRLRKDAKFQDGSPVTADDVKWSLDRCVTAPILGKAQLLTGSLTS---ADQFKVIDPLTIEVTLPKPDK--LALPNLATVYP-MIINSKVAKEHATADDPWATAWLKEHTAGSGAY
B1L5E6/28-178              ----------FTSCFVTNQLYDKLVDFE---------LPDLINAKPEVAERWEVSPDGMTWTFYIRKGIKFASGNPLTADDVVYSLQRVVKLKQTAYSVLEPFLKT----PDQIEKIDDYTVRIKLNKTVAPSFFLSVLTFTTS-SIVDKKVVEAHEKNGDMGS-AWLDDHSAGSG--
G7VCV7/81-218              ---------DFFTWEVLYNTMAGLVRYK----------PGTTDLEPDLAESWTAQDGGKVWVFKLRPNLKFCDGTPLTAQDVKRSIDRVMKINGDPAWLVT-------DFVERVEAPNATTVVFYLKKPVS--YFLALVATPPY-FPVHPRYNPDKVDSDQTAG---------GAG--
A4Z277/50-221              SLDMQGVGSNQTVNGLAWNCYDRLLSYAAKTLPDGTISYDRATLAPELAESWEVAADGMSCTFKLRNDATFHDGTPVTAKDVKWSFDRAVSVGGFPTFQMSAGSLEK---PEQFVLVDDHTFRIDYIRKDK--MLLFNVAVVVP-FVINSELAKKNATPEDPWALAWLKNNEAGGGAY
G7D397/50-221              SLDMQGVGSNQTVNGLSWNCYDRLLTYASRTLPDGTVSHDREKLAPELAESWEVAADGMSCTFKLRRDAKFHDGTPVTAKDVKWSFDRAVKVGGFPTFQMSAGSLEK---PEQFVVVDDHTFRIDYVRKDK--MLLFNVAVVVP-FIINSELAKKNATPEDPWALAWLRTNEAGGGAY
A0A1B9YFR8/45-215          TLDPNIPGATRESFAVSLSTYDRLVSFGRKQL-NGKWVFDLDKITGELAESYDVSPDGLKITFHLRKDAKFQDGSPVTAEDVKWSLDRAVTAPILGKNQLLTGSLTS---ADQFKVIDPLTFEVTLPKPDK--LALPNLAVVYP-IIINSKVAKQHATADDPWATAWLKEHTAGSGAY
I0GAV4/46-215              -LDPNIPGATRESFGLSMSTYDRLVSFGRKQL-NGKWVFDLDTITGELAESYDVSPDKLKITFHLRKDAKFQDGSPVTADDVKWSLDRCVTAPILGKAQLLTGSLTS---ADQFKVIDPLTVEVTLPKPDK--LALPNLATVYP-MIINSKLAKEHATADDPWAMAWLKEHAAGSGAY
A0A1X0NA09/48-214          SLDPAG-ATGLEVAEVNSNVYDMLLEQD---------AAQPDRLIPALAERWEISPDRMRLTFHLRPGVIFHSGNAVTAQDVAWSLQRVVTLNKALASTWKAYGYTSKNVSELMRAEGPSTFVLELPKATDPMLVLNTLATSPSAFIIDRLTALQHAKGDDLGA-GWLTTNTAGSGAF
A0A1E3XWA0/48-214          SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIPALAERWEISPDRMRLTFHLRPGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTADNVSKLMRAEGPSTFVLDLPKATDPMLVLNTLATSPSAFVIDRLTALQHAKGDDLGA-AWLTTNTAGSGAF
Q880C3/48-214              SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIAALAERWEISPDRMRLTFHLRAGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTAKNVSELMRAEGPSTFVLDLPKATDPMLVLNTLATSPSAFVIDRLTALQHARGDDLGA-GWLTTNTAGSGAF
W0H3W3/48-214              SLDPAG-ATGLEVSEVNSNVYDMLLEQD---------AARPDQLIPSLAERWEISPDRMRLTFHLRPGVVFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTAQNVTQLMRAEGPSTFVLDLPKATDPLLVLNTLATSPSAFVIDRVTALQNAQGDDQGA-AWLTTHTAGSGAF
A0A0N0W5A5/48-214          SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIPALAERWEISPDRMRLTFHLRPGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTADNVSKLMRAEGPSTFVLDLPKATDPMLVLNTLATSPSAFVIDRLTALQHAKGDDLGA-AWLTTNTAGSGAF
A0A0E3VTE8/61-231          -LDMQGVGSNQTVNGLSWNCYDRLLTYASKTLPDGTVSYDREKLAPELAESWEVAADGMSCTFRLRKDAKFHDGAPVTARDVKWSFDRAVKVGGFPTFQMSAGSLEK---PEQFVVVDDHTFRIDYVRKDK--MLLFNVAVVVP-FIINSELAKKNATPEDPWALAWLKTNEAGGGAY
A0A2A6MQX0/61-231          -LDMQGVGSNQTVNGLSWNCYDRLLTYASKTLPDGTVSYDREKLAPELAESWEVAADGMSCTFRLRKDAKFHDGAPVTARDVKWSFDRAVKVGGFPTFQMSAGSLEK---PEQFVVVDDHTFRIDYVRKDK--MLLFNVAVVVP-FIINSELAKKNATPEDPWALAWLKTNEAGGGAY
A0A2A6N7E2/45-215          TLDPNIPGSTRESFALSMSTYDRLVAFGRKQL-NGKWVFDLDTITGELAESYDVSPDGLKLTFRLRKDAKFQDGSPVTADDVKWSLDRCVTAPILGKAQLLTGSLTS---ADQFKVIDPLTIEVTLPKPDK--LALPNLATVYP-MIINSKVAKEHATADDPWATAWLKEHTAGSGAY
A4YP43/45-215              TLDPNIPGSTREAFALSMSSYDRLVSFGRKQL-NGKWVFDLDTITGELAESYSVSADGLKITFKLRPDAKFQDGSPVTAEDVKWSLDRCVTAPILGKAQLLTGSLTS---ADQFKVIDPLTIEVTLPKPDK--LALPNLATVYP-IIINSKLAKAHATADDPWALNWTKENAAGSGAY
G7DQI3/45-215              TLDPNIPGSTRESFALSMSTYDRLVAFGRKQL-NGKWVFDLDTITGELAESYDVSPDGLKLTFRLRKDAKFQDGSPVTAEDVKWSLDRCVTAPILGKAQLLTGSLTS---ADQFKVIDPLTIEVTLPKPDK--LALPNLATVYP-MIINSKVAKEHATADDPWATAWLKEHTAGSGAY
A0A0Q0CX14/48-214          SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIAALAERWEISPDRMRLTFHLRAGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTAKNVSELMRAEGPSTFVLDLPKATDPMLVLNTLATSPSAFVIDRLTALQHARGDDLGA-GWLTTNTAGSGAF
A0A0P9QD56/48-214          SLDPAG-ATGLEVSEVNANVYDMLLEQD---------AARPDQLIPALAERWEISPDRMRLTFHLRPGVTFHSGNPLTAQDVAWSLQRVVTLNKALASTWKAYGYTADNVSKLMRAEGPSTFVLDLPKATDPMLVLNTLTTSPSAFVIDRLTALQHAKGDDLGA-AWLTTNTAGSGAF
#=GC scorecons             2554330333334346426456495354010101100234353646489856665466533795884555946948679588569659575443344344332333201146444535438535464744400548346754440557543463456347644604543333586944
#=GC scorecons_70          _______________*__*__*_*___________________*___***_*_*__*____**_**____*__*_****_**__*__*_*______________________________*____*_*_______*__**_______*____*______**__*_________*_*__
#=GC scorecons_80          _______________________*_______________________***___________**_**____*__*_*_**_**__*__*_*______________________________*______________*___*_______*_________________________*_*__
#=GC scorecons_90          _______________________*________________________*_____________*_**____*__*_*__*_**__*__*________________________________*______________*_____________________________________*_*__
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