# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/000634
#=GF DE Partner of Paired
#=GF AC 3.80.10.10/FF/000634
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.309
#=GS A0A0B4KF28/448-538  AC A0A0B4KF28
#=GS A0A0B4KF28/448-538  OS Drosophila melanogaster
#=GS A0A0B4KF28/448-538  DE Partner of paired, isoform B
#=GS A0A0B4KF28/448-538  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4KF28/448-538  DR GO; GO:0019005; GO:0031146; 
#=GS Q9W214/448-535      AC Q9W214
#=GS Q9W214/448-535      OS Drosophila melanogaster
#=GS Q9W214/448-535      DE Partner of Paired
#=GS Q9W214/448-535      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9W214/448-535      DR GO; GO:0019005; GO:0031146; 
#=GS B4KP95/455-548      AC B4KP95
#=GS B4KP95/455-548      OS Drosophila mojavensis
#=GS B4KP95/455-548      DE Uncharacterized protein
#=GS B4KP95/455-548      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A0M4EW72/441-525  AC A0A0M4EW72
#=GS A0A0M4EW72/441-525  OS Drosophila busckii
#=GS A0A0M4EW72/441-525  DE Ppa
#=GS A0A0M4EW72/441-525  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B3MIW7/455-549      AC B3MIW7
#=GS B3MIW7/455-549      OS Drosophila ananassae
#=GS B3MIW7/455-549      DE Uncharacterized protein
#=GS B3MIW7/455-549      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4LIS9/459-552      AC B4LIS9
#=GS B4LIS9/459-552      OS Drosophila virilis
#=GS B4LIS9/459-552      DE Uncharacterized protein
#=GS B4LIS9/459-552      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A0J9RJ43/448-538  AC A0A0J9RJ43
#=GS A0A0J9RJ43/448-538  OS Drosophila simulans
#=GS A0A0J9RJ43/448-538  DE Uncharacterized protein
#=GS A0A0J9RJ43/448-538  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NNM4/448-538      AC B3NNM4
#=GS B3NNM4/448-538      OS Drosophila erecta
#=GS B3NNM4/448-538      DE Uncharacterized protein
#=GS B3NNM4/448-538      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4I893/448-535      AC B4I893
#=GS B4I893/448-535      OS Drosophila sechellia
#=GS B4I893/448-535      DE GM15616
#=GS B4I893/448-535      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS Q291P6/438-526      AC Q291P6
#=GS Q291P6/438-526      OS Drosophila pseudoobscura pseudoobscura
#=GS Q291P6/438-526      DE Uncharacterized protein
#=GS Q291P6/438-526      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0JJS0/439-526  AC A0A3B0JJS0
#=GS A0A3B0JJS0/439-526  OS Drosophila guanche
#=GS A0A3B0JJS0/439-526  DE Blast:F-box/LRR-repeat protein 14
#=GS A0A3B0JJS0/439-526  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4MQC2/453-540      AC B4MQC2
#=GS B4MQC2/453-540      OS Drosophila willistoni
#=GS B4MQC2/453-540      DE GK21848
#=GS B4MQC2/453-540      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4GAF9/438-526      AC B4GAF9
#=GS B4GAF9/438-526      OS Drosophila persimilis
#=GS B4GAF9/438-526      DE GL10712
#=GS B4GAF9/438-526      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GF SQ 13
A0A0B4KF28/448-538          -LYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVR-----
Q9W214/448-535              -LYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
B4KP95/455-548              -LYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVRXCV--
A0A0M4EW72/441-525          ----LRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
B3MIW7/455-549              --YRLRSLSLNQCQITDHGMLKIAKALHELENLNIGPCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVRXCVHH
B4LIS9/459-552              -LYRLRSLSLNQCQITDQGMLKIAKSLHELENLNIGQCSRITDKGLQTLAEDLSNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVRXCV--
A0A0J9RJ43/448-538          -LYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVR-----
B3NNM4/448-538              -LYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLWLVR-----
B4I893/448-535              -LYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
Q291P6/438-526              GLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
A0A3B0JJS0/439-526          -LYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
B4MQC2/453-540              -LYRLRSLSLNQCQITDQGMLKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLTSKGIDIIMKLPKLQKLNLGLW--------
B4GAF9/438-526              GLYRLRSLSLNQCQITDQGMVKIAKSLQELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW--------
#=GC scorecons              0577999999999999969979999697999999997999999999999999969999999999999899999999999999999999911100000
#=GC scorecons_70           __***********************_***************************************************************________
#=GC scorecons_80           ____*************_*******_*_*************************_***********************************________
#=GC scorecons_90           ____*************_**_****_*_********_****************_***********************************________
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