# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/000573
#=GF DE Leucine-rich repeat-containing protein 41
#=GF AC 3.80.10.10/FF/000573
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 34.803
#=GS A0A091HQH5/379-735  AC A0A091HQH5
#=GS A0A091HQH5/379-735  OS Calypte anna
#=GS A0A091HQH5/379-735  DE Leucine-rich repeat-containing protein 41
#=GS A0A091HQH5/379-735  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Apodiformes; Trochilidae; Calypte; Calypte anna; 
#=GS A0A093HNB8/363-715  AC A0A093HNB8
#=GS A0A093HNB8/363-715  OS Struthio camelus australis
#=GS A0A093HNB8/363-715  DE Leucine-rich repeat-containing protein 41
#=GS A0A093HNB8/363-715  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio; Struthio camelus; Struthio camelus australis; 
#=GS A0A093GE81/371-721  AC A0A093GE81
#=GS A0A093GE81/371-721  OS Picoides pubescens
#=GS A0A093GE81/371-721  DE Leucine-rich repeat-containing protein 41
#=GS A0A093GE81/371-721  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Piciformes; Picidae; Picoides; Picoides pubescens; 
#=GS H0ZD60/353-710      AC H0ZD60
#=GS H0ZD60/353-710      OS Taeniopygia guttata
#=GS H0ZD60/353-710      DE Leucine rich repeat containing 41
#=GS H0ZD60/353-710      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia; Taeniopygia guttata; 
#=GS G1NDW6/342-693      AC G1NDW6
#=GS G1NDW6/342-693      OS Meleagris gallopavo
#=GS G1NDW6/342-693      DE Leucine rich repeat containing 41
#=GS G1NDW6/342-693      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris; Meleagris gallopavo; 
#=GS A0A091J5V7/342-710  AC A0A091J5V7
#=GS A0A091J5V7/342-710  OS Egretta garzetta
#=GS A0A091J5V7/342-710  DE Leucine-rich repeat-containing protein 41
#=GS A0A091J5V7/342-710  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta; Egretta garzetta; 
#=GS A0A087RHM7/361-711  AC A0A087RHM7
#=GS A0A087RHM7/361-711  OS Aptenodytes forsteri
#=GS A0A087RHM7/361-711  DE Leucine-rich repeat-containing protein 41
#=GS A0A087RHM7/361-711  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes; Aptenodytes forsteri; 
#=GS A0A091G358/376-738  AC A0A091G358
#=GS A0A091G358/376-738  OS Cuculus canorus
#=GS A0A091G358/376-738  DE Leucine-rich repeat-containing protein 41
#=GS A0A091G358/376-738  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus; Cuculus canorus; 
#=GS A0A091N5C3/353-708  AC A0A091N5C3
#=GS A0A091N5C3/353-708  OS Apaloderma vittatum
#=GS A0A091N5C3/353-708  DE Leucine-rich repeat-containing protein 41
#=GS A0A091N5C3/353-708  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Trogoniformes; Trogonidae; Apaloderma; Apaloderma vittatum; 
#=GS A0A093GNN3/346-696  AC A0A093GNN3
#=GS A0A093GNN3/346-696  OS Tyto alba
#=GS A0A093GNN3/346-696  DE Leucine-rich repeat-containing protein 41
#=GS A0A093GNN3/346-696  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Strigiformes; Tytonidae; Tyto; Tyto alba; 
#=GS A0A091QK70/360-710  AC A0A091QK70
#=GS A0A091QK70/360-710  OS Leptosomus discolor
#=GS A0A091QK70/360-710  DE Leucine-rich repeat-containing protein 41
#=GS A0A091QK70/360-710  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Coraciiformes; Leptosomidae; Leptosomus; Leptosomus discolor; 
#=GS U3IG87/426-776      AC U3IG87
#=GS U3IG87/426-776      OS Anas platyrhynchos platyrhynchos
#=GS U3IG87/426-776      DE Leucine rich repeat containing 41
#=GS U3IG87/426-776      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; Anas platyrhynchos platyrhynchos; 
#=GS F1NBD2/424-775      AC F1NBD2
#=GS F1NBD2/424-775      OS Gallus gallus
#=GS F1NBD2/424-775      DE Uncharacterized protein
#=GS F1NBD2/424-775      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS R0L344/355-705      AC R0L344
#=GS R0L344/355-705      OS Anas platyrhynchos
#=GS R0L344/355-705      DE Leucine-rich repeat-containing protein 41
#=GS R0L344/355-705      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; 
#=GS A0A493TX63/455-805  AC A0A493TX63
#=GS A0A493TX63/455-805  OS Anas platyrhynchos platyrhynchos
#=GS A0A493TX63/455-805  DE Leucine rich repeat containing 41
#=GS A0A493TX63/455-805  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos; Anas platyrhynchos platyrhynchos; 
#=GF SQ 15
A0A091HQH5/379-735          ------------SCKKRGGS--AGTFSLKAAHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGANVFCILSGLRALSRRSDCQLRVVRLSDVFSHMPCMDLVRCVLSAFPQLHTLSVSFDLKNQLEGNSPQGIPSCSEAEIPESCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSATLPCSQELGLLLEALKECNPDLKKLSFHDVNLAEHQKEVLLLLQDPVLQELTFSFCRLFESSTPEFLSEIINAVKRNSTLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGRIQFTHLRLFQNWLDQDAATAQEALRRLQAVCSVVN
A0A093HNB8/363-715          ----------------RGGS--AGIFSLKAAHRFRSVSTLELFSVPLTGDTCRTLSNLLSSWVSLENLVLSYNGLGDNIFCLLSGLRALSRHSDCCLHVVRVSDVFSHIPCMDLVRCILSAFPRLHTLSVSFDLKNQLEGNRPEGNPSCREAEIPESCLEQLEIRFPREPLHTAFLLPVLKASRSLQQLSLDSAALPCPQELEHLLQALRECNPNLKKLSFHDVNLADHQKEVLLLLQDPILQEITFSFCRLFESCTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGHIKFTHLRLFQNWLDQDVETAQEALRRLKAVCSVVN
A0A093GE81/371-721          ------------------GS--AGVFSLKAARRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGANISCILTGLRALSRRSDCQLRVVRVSDVFSHMPCMELVRCILGAFPQLHTLSVSFDLKNQLEGNRPEGNPSCSEAEIPESCLEQLEIRFPREPLHTEFLLPVLKASKSLQQLSLDSATLPCSQELGLLLEALKECNPSLKKLSFHDVNLAEHQKEVLLLLQDPVLQEITFSFCRLFESSTNEFLSEIINAVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSALCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
H0ZD60/353-710              -------------TSSIPGSPCTGILSLKAAHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLNANISCILSGLRALSRHPECRFRVLRVSDMFSHMPCMELVRCILSALPQLHTLSVSFDLKNQLEGSRPGASPSCSEAEIPESCLEVLEIRFPREPLHTAFLRPVLKASKSLQQLSLDSATLPCPQELGLLLEVLKECTSNLKKLSFHDVNLAEHQKEVLLLLQDPGLQEITFSFCRLFESSTAEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQLPFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
G1NDW6/342-693              -----------------RGS--TGIFSLKAAHRFRSVSTLELFSIPLTGDTCRTLSNLLSSWVSLENLVLSYNGLGANIFCILSGLRALSQHSDCCLRVLRVSDVFSHMPCMELVRCILSVFPRLHTLSVSFDLKSQLEGNRPEGNPSCGDAEIPECCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSATLPSSLELGLLLQALKECNPNLKKLSFHDVNLADHQKEVLLLLQDPMLQEITFSFCRLFESCTAEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGYIQQRGGKIQFTHLRLFQNWLDQDAETAQEALRRLRAVCSVVN
A0A091J5V7/342-710          SSSPGSLCTGHAGCKKRGGS--AGIFSLKAAHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGANIFCILSGLRALSRHSDCRLRVLRVSDVFSHMPCMELVRCILSAFPQLHTLSVSFDLKNQLEGNRPEGNPSCSEAEIPESCLEQLEIRFPREPLDTAFLLPVLKASKSLQQLSLDSATLPSSQELGLLLEVLKECNPNLKKLSFHDVNLAEHQKEVLLLLQDPVLQEITFSFCRLFESSTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
A0A087RHM7/361-711          ------------------GS--AGIFSLKAAHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGADIFCILSGLRALSRHSDCHLRVVRVSDVFSHMPCMELVRCILSAFPQLHTLSVSFDLKNQLEGNRPEGNPSCSEVEIPESCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSATLPCSQELGLLLEVLKECNPNLKKLSFHDVNLAEHQKEVLLLLQDPVLQEITFSFCRLFESSTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
A0A091G358/376-738          ------LHTDHAGCKKIGGS--AGIFSLKAAHRFRSVSMLELFSIPLTGEMCRTLSNLLSSWLSLENLVLSYNGLGANIFCILSGLRTLSRHPDCHLRVVRVSDVYSHVPCMELVHCILSALPQLQTLSLSFDLKKQLEGNRPEGNPSCSEAEIPESCLEQLEIRFPREPLQTMFLLPVLKASKSLQQLSLDSATLPCSQELGLLLEALKECNPNLKKVSFRDMNLAEHQKEVLLLLQDPVLQEITFSFCRLFESSTAEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIPFTHLCLFQNWLDQDAETAQEALRRLKAVCSVVN
A0A091N5C3/353-708          -------------CKKRGGS--AGIFSPKVPHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGANIFCVLAGLRALAHHPDCRLRVVRVSDVFSHVPCMELVCCILSAFPQLHTLSVSFDLKNQLEGNRPEGNPGCSKVEIPESCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSAALPSSQELGLLLEALKECNPNLKKLSFHDVNLAEHQKEVLLLLQDPILQEVTFSFCRLFESSTTEFLLEIINAVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGHIQFTHLRLFQNWLDQDAETAQEALRRLRAVCSVVN
A0A093GNN3/346-696          ------------------GS--AGIFSLKAARRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNGLGANIFCILSGLRALSCHSDCHLRVVRVSDVFSHMPCMELVHCILSAFPQLHTLSVSFDLKNQLEGNRPEGNPSCSEVEIPESCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSTTLPCSQELGLLLEALRECNPNLKKVSFHDVNLAEHQKEVLLLLQDPILQEITFSFCRLFESSTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLIALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
A0A091QK70/360-710          ------------------GS--AGIFSLKATHRFRSVSTLELFSIPLTGETCRTLSNLLSSWVSLENLVLSYNDLGANIFCILSGLRALSRHSDCHLRVVRVSDVFSHMPCMELVRCVLSAFPQLHTLSVSFDLKNQLEGNKPEGNPSCSEVEIPESCLEQLEIRFPREPLHTTFLLPVLKASKSLQQLSLDSATLPCSQQLGLLLEALKECNPALKKLSFHDVNLAEHQKEVLVLLQDPVLQEITFSFCRLFESSTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
U3IG87/426-776              ------------------GS--AGIFPLKAAHRFRSVSTLELCSIPLTGDTCRTLSNLLSSWVSLENLVLSYNGLGVNIFCILSGLRALSRHSDCRLHVLRVSDVFSHMPCMELVRCILSTLPQLHTLSVSFDLKNQLEGNGPEGNPSCSDAEIPESCLEQLEIRFPREPLHTMFLLPVLKASKSLQQLSLDSATLPSSQELGLLLQALKECNPSLKKLSFHDVNLADHQKEVLLLLQDPILQEISFSFCRLFESCTAEFLMEIINTVKKNTSLKSLRLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
F1NBD2/424-775              -----------------GGS--TGIFSLKAAHRFRSVSTLELFSIPLSDDTCRTLSNLLSSWVSLENLVLSYNGLGANIFCILSGLRALSQYSDCCLRVLRVSDVFSHMPCMELVHCILSVFPRLHTLSVSFDLKNQLEGNRPEGNPSCSDAEIPECCLEQLEIRFPREPLHTAFLLPVLKASKSLQQLSLDSATLPSSQELGLLLQALKECNPNLKKLSFHDVNLADHQKEVLLLLQDPMLQEITFSFCRLFESCTTEFLSEIINTVKRNSSLKSLKLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGYIQQRGGKIQFTHLRLFQNWLDQDAETAQEALRRLRAVCSVVN
R0L344/355-705              ------------------GS--AGIFPLKAAHRFRSVSTLELCSIPLTGDTCRTLSNLLSSWVSLENLVLSYNGLGVNIFCILSGLRALSRHSDCRLHVLRVSDVFSHMPCMELVRCILSTLPQLHTLSVSFDLKNQLEGNGPEGNPSCSDAEIPESCLEQLEIRFPREPLHTMFLLPVLKASKSLQQLSLDSATLPSSQELGLLLQALKECNPSLKKLSFHDVNLADHQKEVLLLLQDPILQEISFSFCRLFESCTAEFLMEIINTVKKNTSLKSLRLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
A0A493TX63/455-805          ------------------GS--AGIFPLKAAHRFRSVSTLELCSIPLTGDTCRTLSNLLSSWVSLENLVLSYNGLGVNIFCILSGLRALSRHSDCRLHVLRVSDVFSHMPCMELVRCILSTLPQLHTLSVSFDLKNQLEGNGPEGNPSCSDAEIPESCLEQLEIRFPREPLHTMFLLPVLKASKSLQQLSLDSATLPSSQELGLLLQALKECNPSLKKLSFHDVNLADHQKEVLLLLQDPILQEISFSFCRLFESCTAEFLMEIINTVKKNTSLKSLRLPGNRLGNHRLVALADIFSEDSSSSLCQLDVSSNCIKPDGLLEFTKKLEGHIQQRGGQIQFTHLRLFQNWLDQDAETAQEALRRLKAVCSVVN
#=GC scorecons              00000000000000000299007978789877999999799979899887799999999999899999999998976887979799989867689487969899889979998996989866979899989999979999869787989766999979997999999999979599799999989999999998799678898799669899885999799898999799999989999959997799999999969599969999799797899997999999999998999999999999899999999999999999999999998999999686999979999999998899999999979999999
#=GC scorecons_70           __________________**__*************************************************************************_*********************************************_*******************************_***********************_****************_*************************_**************_*_***_*************************************************************************************************************
#=GC scorecons_80           __________________**__********************_******_**************************_**_**********_*_**_*_*_********_******_****__*******************_***_****__*********************_***********************_********__******_************_************_**************_*_***_*************************************************************************_*_*************************_*******
#=GC scorecons_90           __________________**___*_*_***__******_***_******__************************__**_*_*_******___**_*_*_********_***_**_****__*_***********_****__*___***___****_***_**********_*_**_*****************_**__****_**__****___***_********_************_***__*********_*_***_****_**_*_*****_*********************************************************_*_****_**********_*********_*******
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