# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/000484
#=GF DE Leucine-rich repeat kinase, isoform C
#=GF AC 3.80.10.10/FF/000484
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 57.413
#=GS Q9TZM3/799-965      AC Q9TZM3
#=GS Q9TZM3/799-965      OS Caenorhabditis elegans
#=GS Q9TZM3/799-965      DE Leucine-rich repeat serine/threonine-protein kinase 1
#=GS Q9TZM3/799-965      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9TZM3/799-965      DR GO; GO:0005737; GO:0005794; GO:0006979; GO:0034613; GO:0034976; GO:0043025; GO:0048489; GO:0048846; GO:1901215; 
#=GS Q9TZM3/799-965      DR EC; 2.7.11.1; 
#=GS Q9VDJ9/753-915      AC Q9VDJ9
#=GS Q9VDJ9/753-915      OS Drosophila melanogaster
#=GS Q9VDJ9/753-915      DE Leucine-rich repeat kinase
#=GS Q9VDJ9/753-915      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VDJ9/753-915      DR GO; GO:0004672; GO:0004674; GO:0005515; GO:0005737; GO:0005765; GO:0005795; GO:0006914; GO:0007528; GO:0008088; GO:0009267; GO:0017137; GO:0018105; GO:0031594; GO:0031902; GO:0032418; GO:0040011; GO:0042147; GO:0043198; GO:0044297; GO:0048312; GO:0050774; GO:0050808; GO:0051683; GO:0061174; GO:0070507; GO:0090128; GO:1900242; GO:1901215; GO:1990033; GO:2000331; GO:2000785; 
#=GS A0A0B4KHT3/821-983  AC A0A0B4KHT3
#=GS A0A0B4KHT3/821-983  OS Drosophila melanogaster
#=GS A0A0B4KHT3/821-983  DE Leucine-rich repeat kinase, isoform D
#=GS A0A0B4KHT3/821-983  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4KHT3/821-983  DR GO; GO:0004672; GO:0004674; GO:0005765; GO:0005795; GO:0006914; GO:0008088; GO:0017137; GO:0018105; GO:0031902; GO:0032418; GO:0040011; GO:0042147; GO:0043195; GO:0043198; GO:0044297; GO:0048488; GO:0050774; GO:0050808; GO:0051683; GO:0071212; GO:1900242; GO:1901215; GO:1990033; 
#=GS A0A0B4KH16/730-892  AC A0A0B4KH16
#=GS A0A0B4KH16/730-892  OS Drosophila melanogaster
#=GS A0A0B4KH16/730-892  DE Leucine-rich repeat kinase, isoform C
#=GS A0A0B4KH16/730-892  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4KH16/730-892  DR GO; GO:0004672; GO:0004674; GO:0005765; GO:0005795; GO:0006914; GO:0008088; GO:0017137; GO:0018105; GO:0031902; GO:0032418; GO:0040011; GO:0042147; GO:0043198; GO:0044297; GO:0050774; GO:0050808; GO:0051683; GO:1900242; GO:1901215; GO:1990033; 
#=GS A0A2G5VMV3/501-665  AC A0A2G5VMV3
#=GS A0A2G5VMV3/501-665  OS Caenorhabditis nigoni
#=GS A0A2G5VMV3/501-665  DE Uncharacterized protein
#=GS A0A2G5VMV3/501-665  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A1I7UF81/505-667  AC A0A1I7UF81
#=GS A0A1I7UF81/505-667  OS Caenorhabditis tropicalis
#=GS A0A1I7UF81/505-667  DE Uncharacterized protein
#=GS A0A1I7UF81/505-667  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS E3LM95/505-669      AC E3LM95
#=GS E3LM95/505-669      OS Caenorhabditis remanei
#=GS E3LM95/505-669      DE CRE-LRK-1 protein
#=GS E3LM95/505-669      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS G0MJT5/772-935      AC G0MJT5
#=GS G0MJT5/772-935      OS Caenorhabditis brenneri
#=GS G0MJT5/772-935      DE CBN-LRK-1 protein
#=GS G0MJT5/772-935      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A261BMG4/806-970  AC A0A261BMG4
#=GS A0A261BMG4/806-970  OS Caenorhabditis latens
#=GS A0A261BMG4/806-970  DE Uncharacterized protein
#=GS A0A261BMG4/806-970  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2H2I759/769-929  AC A0A2H2I759
#=GS A0A2H2I759/769-929  OS Caenorhabditis japonica
#=GS A0A2H2I759/769-929  DE Uncharacterized protein
#=GS A0A2H2I759/769-929  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS B4JUC1/771-930      AC B4JUC1
#=GS B4JUC1/771-930      OS Drosophila grimshawi
#=GS B4JUC1/771-930      DE GH17211
#=GS B4JUC1/771-930      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A2G5VN11/501-665  AC A0A2G5VN11
#=GS A0A2G5VN11/501-665  OS Caenorhabditis nigoni
#=GS A0A2G5VN11/501-665  DE Uncharacterized protein
#=GS A0A2G5VN11/501-665  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A260YMU8/806-970  AC A0A260YMU8
#=GS A0A260YMU8/806-970  OS Caenorhabditis remanei
#=GS A0A260YMU8/806-970  DE Uncharacterized protein
#=GS A0A260YMU8/806-970  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A0R3NFC0/732-890  AC A0A0R3NFC0
#=GS A0A0R3NFC0/732-890  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFC0/732-890  DE Uncharacterized protein, isoform C
#=GS A0A0R3NFC0/732-890  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R3NFE6/732-890  AC A0A0R3NFE6
#=GS A0A0R3NFE6/732-890  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NFE6/732-890  DE Uncharacterized protein, isoform E
#=GS A0A0R3NFE6/732-890  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS Q29AY4/765-923      AC Q29AY4
#=GS Q29AY4/765-923      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29AY4/765-923      DE Uncharacterized protein, isoform B
#=GS Q29AY4/765-923      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0KMK8/733-891  AC A0A3B0KMK8
#=GS A0A3B0KMK8/733-891  OS Drosophila guanche
#=GS A0A3B0KMK8/733-891  DE Blast:Glutamate receptor ionotropic, kainate 2
#=GS A0A3B0KMK8/733-891  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A0R3NL21/765-923  AC A0A0R3NL21
#=GS A0A0R3NL21/765-923  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NL21/765-923  DE Uncharacterized protein, isoform D
#=GS A0A0R3NL21/765-923  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0KHA4/766-924  AC A0A3B0KHA4
#=GS A0A3B0KHA4/766-924  OS Drosophila guanche
#=GS A0A3B0KHA4/766-924  DE Blast:Glutamate receptor ionotropic, kainate 2
#=GS A0A3B0KHA4/766-924  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS B4GZD1/764-923      AC B4GZD1
#=GS B4GZD1/764-923      OS Drosophila persimilis
#=GS B4GZD1/764-923      DE GL27344
#=GS B4GZD1/764-923      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GF SQ 20
Q9TZM3/799-965              NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQKEEESCVHKRHDSLEWLKTLQLAGNRLRSISVTN--------------------AASKVLLPALNVMDISDNKLLQAPPDVARLTLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
Q9VDJ9/753-915              ------------------KTASSKGSSSSATSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A0B4KHT3/821-983          ------------------KTASSKGSSSSATSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A0B4KH16/730-892          ------------------KTASSKGSSSSATSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A2G5VMV3/501-665          NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHQALVDPQKEEE-CVHKRHDSLEWLKTLQLAGNRLRSITVSN---------------------ATKVLLPQLNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
A0A1I7UF81/505-667          --SMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHATIDPQKEEE-CVHKRHDSLEWLKTLQLAGNRLRSISVSS---------------------TAKVLLPALNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTGIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
E3LM95/505-669              NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHTVIDSQKEEE-CVHKRHDSLEWLKTLQLAGNRLRTITVST---------------------AAKVLLPALNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNIAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
G0MJT5/772-935              -GSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHQALIDPQKEEE-CVHKRHDSLEWLKTLQLAGNRLRTISVSS---------------------AAKVLLPALNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
A0A261BMG4/806-970          NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHTVIDSQKEEE-CVHKRHDSLEWLKTLQLAGNRLRTITVST---------------------AAKVLLPALNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
A0A2H2I759/769-929          ----LPKRRNSPARQHRSRSKSAVRSQRSLSVSRHLTLTDPQKEEE-CVHKRHDSLEWLKTLQLAGNRLRSVSVTS---------------------PTKVLLPALNVLDLSDNKLGQAPADVAKLSLLSMLNLSGNTAIKELPSDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
B4JUC1/771-930              ---------------------YKTTTKGSSCSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWNVVGVNKSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGNVQISELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A2G5VN11/501-665          NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHQALVDPQKEEE-CVHKRHDSLEWLKTLQLAGNRLRSITVSN---------------------ATKVLLPQLNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
A0A260YMU8/806-970          NGSMLPKRRNSPARQHRSRSKSAVRSQRSLSVSRHHTVIDSQKEEE-CVHKRHDSLEWLKTLQLAGNRLRTITVST---------------------AAKVLLPALNVLDLSDNKLLQASPDIAKLSLLSMLNLSGNTAIKELPPDYGMLSRLWSLSLKGCSLKEPLESMVNVENCKTVEIVAYLKT
A0A0R3NFC0/732-890          ----------------------STASKGNASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A0R3NFE6/732-890          ----------------------STASKGNASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
Q29AY4/765-923              ----------------------STASKGNASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A3B0KMK8/733-891          ----------------------SSASKGSASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGLSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIDSKKHKTMDIVGYLKS
A0A0R3NL21/765-923          ----------------------STASKGNASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
A0A3B0KHA4/766-924          ----------------------SSASKGSASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGLSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIDSKKHKTMDIVGYLKS
B4GZD1/764-923              ---------------------KSSASKGNASSFRASVL------KSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESEDADWSVVGVSKSKVIFPNLSMLDMTNNCLKEIPPSLHELSSLSVLNISGNVNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKS
#=GC scorecons              0111222222222222222223544855757559545612122265294979945994979949969495484676222222222222222122211459966959668966694946566565598599699699955959998559699999696579959699959975566599679969996
#=GC scorecons_70           _________________________*__*_*__*___*_________*_****__**_****_**_*_*__*_**________________________*****_*_****_**_*_*_**____**_*********__*_****__*******_*__***_*****_***_____******_***_
#=GC scorecons_80           _________________________*_______*_____________*_*_**__**_*_**_**_*_*__*__*________________________**__*_*__**___*_*_________**_**_**_***__*_****__*_*****_*___**_*_***_**______**__**_***_
#=GC scorecons_90           _________________________*_______*_____________*_*_**__**_*_**_**_*_*__*___________________________**__*_*__**___*_*_________**_**_**_***__*_****__*_*****_*___**_*_***_**______**__**_***_
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