# STOCKHOLM 1.0
#=GF ID 3.60.20.10/FF/000072
#=GF DE Proteasome subunit alpha type
#=GF AC 3.60.20.10/FF/000072
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.433
#=GS O17586/1-246      AC O17586
#=GS O17586/1-246      OS Caenorhabditis elegans
#=GS O17586/1-246      DE Proteasome subunit alpha type-6
#=GS O17586/1-246      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O17586/1-246      DR GO; GO:0005515; GO:0019773; 
#=GS O17586/1-246      DR EC; 3.4.25.1; 
#=GS A0A0D1CFP7/1-305  AC A0A0D1CFP7
#=GS A0A0D1CFP7/1-305  OS Ustilago maydis 521
#=GS A0A0D1CFP7/1-305  DE Proteasome endopeptidase complex
#=GS A0A0D1CFP7/1-305  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS W5NA15/1-250      AC W5NA15
#=GS W5NA15/1-250      OS Lepisosteus oculatus
#=GS W5NA15/1-250      DE Proteasome endopeptidase complex
#=GS W5NA15/1-250      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS H3FYE5/1-246      AC H3FYE5
#=GS H3FYE5/1-246      OS Pristionchus pacificus
#=GS H3FYE5/1-246      DE Proteasome subunit alpha type
#=GS H3FYE5/1-246      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS E6ZW99/1-299      AC E6ZW99
#=GS E6ZW99/1-299      OS Sporisorium reilianum SRZ2
#=GS E6ZW99/1-299      DE Proteasome subunit alpha type
#=GS E6ZW99/1-299      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS A0A0F7RXC7/1-301  AC A0A0F7RXC7
#=GS A0A0F7RXC7/1-301  OS Sporisorium scitamineum
#=GS A0A0F7RXC7/1-301  DE Proteasome endopeptidase complex
#=GS A0A0F7RXC7/1-301  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS I2FPF6/1-300      AC I2FPF6
#=GS I2FPF6/1-300      OS Ustilago hordei Uh4857-4
#=GS I2FPF6/1-300      DE Proteasome subunit alpha type
#=GS I2FPF6/1-300      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS A0A1K0GE58/1-300  AC A0A1K0GE58
#=GS A0A1K0GE58/1-300  OS Ustilago bromivora
#=GS A0A1K0GE58/1-300  DE Proteasome subunit alpha type
#=GS A0A1K0GE58/1-300  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS A0A2G5TMW0/2-239  AC A0A2G5TMW0
#=GS A0A2G5TMW0/2-239  OS Caenorhabditis nigoni
#=GS A0A2G5TMW0/2-239  DE Proteasome subunit alpha type
#=GS A0A2G5TMW0/2-239  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XVG4/2-239      AC A8XVG4
#=GS A8XVG4/2-239      OS Caenorhabditis briggsae
#=GS A8XVG4/2-239      DE Proteasome subunit alpha type
#=GS A8XVG4/2-239      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A260ZUU2/1-246  AC A0A260ZUU2
#=GS A0A260ZUU2/1-246  OS Caenorhabditis latens
#=GS A0A260ZUU2/1-246  DE Proteasome subunit alpha type
#=GS A0A260ZUU2/1-246  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS G0PH36/1-246      AC G0PH36
#=GS G0PH36/1-246      OS Caenorhabditis brenneri
#=GS G0PH36/1-246      DE Proteasome subunit alpha type
#=GS G0PH36/1-246      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LTJ8/1-246      AC E3LTJ8
#=GS E3LTJ8/1-246      OS Caenorhabditis remanei
#=GS E3LTJ8/1-246      DE Proteasome subunit alpha type
#=GS E3LTJ8/1-246      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A1I7UVW8/1-246  AC A0A1I7UVW8
#=GS A0A1I7UVW8/1-246  OS Caenorhabditis tropicalis
#=GS A0A1I7UVW8/1-246  DE Proteasome subunit alpha type
#=GS A0A1I7UVW8/1-246  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A8WY28/1-246      AC A8WY28
#=GS A8WY28/1-246      OS Caenorhabditis briggsae
#=GS A8WY28/1-246      DE Proteasome subunit alpha type
#=GS A8WY28/1-246      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TN91/1-246  AC A0A2G5TN91
#=GS A0A2G5TN91/1-246  OS Caenorhabditis nigoni
#=GS A0A2G5TN91/1-246  DE Proteasome subunit alpha type
#=GS A0A2G5TN91/1-246  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2N8UNS3/1-299  AC A0A2N8UNS3
#=GS A0A2N8UNS3/1-299  OS Sporisorium reilianum f. sp. reilianum
#=GS A0A2N8UNS3/1-299  DE Proteasome subunit alpha type
#=GS A0A2N8UNS3/1-299  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GF SQ 17
O17586/1-246              MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIP--DAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKK---------------------------------KSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVT-----------------------------KDNSKFTKLTSDQVEHHLNQIANRD
A0A0D1CFP7/1-305          MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDASSVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGYAITPDLLAKRMANMNQVYTQRAAMRPYGVSMILVGIDAERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQFKKSSTTTTGDAASAVPEAPAGASATDAAALEAEHISSNLTMQQTLDLAVNTLATVLAQDLKPSELEVAIVGGPDAAKVTLGGDDEGGIAQLDSSTLSKEVQQQKRFRKLNDEEISVILERLAERD
W5NA15/1-250              MSRGSSAGFDRHITIFSPEGRLYQVGAEYELKERSGQGQKEHSVRSRRCVLQPTEPPMGRDYCSTGTVQSCRKQLPSLSNCILSSYPSADSRSQVHRARVEAAEWKYKFGYEIPADMLCRRMADISQVYTQNAEMRPLGCCMMMISMDPQLGPMLYKCDPAGYYCGYRATCAGAKQTEASSYLEKKLRK---------------------------------RPDLPYDKTAELAITCLSSVLSLDFKPSEIEVGVVT-----------------------------KDNPKFRTLSEEEIDAHLVAIAERE
H3FYE5/1-246              MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTACIAVQKRVPDKLIVSDSVTSVFQLTPTIGCAMIGMVP--DSKFQVRRAILEATQWRYKHGHNMPAEQLAKRMADLNQFYTQNAEMRSLGCAMMMISFDDEDGPVMYRVDPAGYYRGVKGISLGVKQQPANAFLEKKMKK---------------------------------KSELSKDATIQLAIEALHNALGVDVRAKDLEVVVVS-----------------------------KDQPKFTKLTDDEVENHLNAIANRD
E6ZW99/1-299              MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDAASVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGFAITPDLLAKRMANLNQVYTQRAAMRPYGVSMILVGIDAERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQLRKSSSST------DVPEPPAGASASDAAALEAQHISSNLSVEQTLDLAVNTLATVLAQDLKPSELEVAIVGGPDAAKVLLGGDDEGGVAQLDSSTLPKQVQLQKRFRKLSDDEISVILERLAERD
A0A0F7RXC7/1-301          MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDAASVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGFAITPDLLAKRMANLNQVYTQRAAMRPYGVSMILVGIDPERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQFKKSSSTA----GDSVPDPPAGASAIDAAALEAEYISSNLSVEQTLDLAVNTLATVLAQDLKPSELEVAIVGGPDAAKVLLGGDDEGGVAQLDSSTLPKEVQLQKRFRKLNDEEVSVILERLAERD
I2FPF6/1-300              MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDASSVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGYAITPDLLAKRMANMNQVYTQRAAMRPYGVSMILVGIDPERGPQIFKIDPAGYYVGFRATAAGVKQTEATNLLEKQFKRSSSNSSA-AAGAGESAPEAASATDAAALEAEQISSNLSKEQTLDLAVNTLATVLAQDLKPSELEVAIVGGPNAARA--AQDDSG--APLDSSTLPKEVQQEKRFRKLNDEEISVILERLAERD
A0A1K0GE58/1-300          MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDASSVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGYAITPDLLAKRMANMNQVYTQRAAMRPYGVSMILVGIDPERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQFKRSSSNSSA-AAGAGESAPEAASATDAAALEAEQISSNLSKEQTLDLAVNTLATVLAQDLKPSELEVAIVGGPDAARA--AQDDSG--APLDSSTLPKEVQQEKRFRKLNDEEISVILERLAERD
A0A2G5TMW0/2-239          ------AGFDRHITIFSPEGRVYQV--EYAFKAINTTNLTAVAVKGDDVAVIAVQKRVPDSLIVRDSVTSIFRISQTVACCAIGIVP--DARFQVKRAQSEAANFKYKHGYDMPVDLLAKKMADLNQYYTQNAEMRCLGVGLLFVAFDDERGPEVYRVDPAGYFRGMRGVAMGVKQGPATVCLEKKIKK---------------------------------RAQWDSTHPAELAIEALQTSLGIDVRANDVEVVVV-------------------------------DKTSVRTLNNEEVEQYLTLIATRD
A8XVG4/2-239              ------AGFDRHITIFSPEGRVYQV--EYAFKAINTTNLTAVAVKGDDVAVIAVQKRVPDSLIVRDSVTSIFRISQTVACCAIGIVP--DARFQVKRAQSEAANFKYKHGYDMPVDLLAKKMADLNQYYTQNAEMRCLGVGLLFVAFDDERGPEVYRVDPAGYFRGMRGVAMGVKQGPATVCLEKKIKK---------------------------------RAQWDSTHPAELAIEALQTSLGIDVRANDVEVVVV-------------------------------DKTSVRTLNNEEVEQYLTLIATRD
A0A260ZUU2/1-246          MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQTVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQVPATSFLEKKIKK---------------------------------KSELNSTETVELAIEALQNSLGIDVRSKDLEVVVVS-----------------------------KENTKFTKLTNDQVEHHLNQIANRD
G0PH36/1-246              MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQTVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVAVGVKQVPATSFLEKKIKK---------------------------------KADLTSTESIELAIEALQSSLGIDVRSKDLEVVVVS-----------------------------KDNTKFTKLTNDQVEHHLNQIANRD
E3LTJ8/1-246              MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQTVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQVPATSFLEKKIKK---------------------------------KSDLNSTETVELAIEALQNSLGIDVRSKDLEVVVVS-----------------------------KENTKFTKLTNDQVEHHLNQIANRD
A0A1I7UVW8/1-246          MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQTVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQVPATSFLEKKIKK---------------------------------KADLTSTETVELAIEALQTSLGIDVRSKDLEVVVVS-----------------------------KENAKFTKLTNDQVEHHLNQIANRD
A8WY28/1-246              MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQVPATSFLEKKIKK---------------------------------KPEMNSTETIELAIEALQNSLGIDVRSKDLEVVVVT-----------------------------KDNTKFTKLTNDQVEHHLNQIANRD
A0A2G5TN91/1-246          MSRGSSAGFDRHITIFSPEGRVYQV--EYAFKAINSTNLTAVAVKGVDTAVIAIQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIP--DAKFQVKRAQGEAASWKYKNGYNMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQVPATSFLEKKIKK---------------------------------KPEMNSTETIELAIEALQNSLGIDVRSKDLEVVVVT-----------------------------KDNTKFTKLTNDQVEHHLNQIANRD
A0A2N8UNS3/1-299          MSRSS---YDRYLTIFSPDGRLYQV--EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKLIDAASVTNIFNLTPEIGCIMTGRVA--DARAQVQRAKMEAADFKYKYGFAITPDLLAKRMANLNQVYTQRAAMRPYGVSMILVGIDAERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQLRKSSSST------DVPEPPAGASASDAAALEAQHISSNLSVEQTLDLAVNTLATVLAQDLKPSELEVAIVGGPDAAKVLLGGDDEGGVAQLDSSTLPKQVQLQKRFRKLSDDEISVILERLAERD
#=GC scorecons            666461337997699999799699900997897785557756897837457654876877577464697666555546774558466009774985995399845899597466477978799668949995959955955665754948599567769999984957655598994597469996578111000000000000010011101111111001455643456469975594559549575577995793111111000001101001011111111014444675695576753494469598
#=GC scorecons_70         ***_*___*****************__********___**__****_*__*___**_***_**_*__**__*_____***___*_____***_**_**__***__***_**_*__************_***_*_**__*__*__*__*_*_**_***_******_*_*____****__**_*****_**____________________________________*____*_****__*___*__*_*__****_**___________________________________*_**__***___*__**_**
#=GC scorecons_80         ________***__*****_**_***__********___**__**_*_*__*___**_***_**____**__________*___*_____**__**_**__***__***_**_____****_**__**_***_*_**__*________*_*_**__*__******_*______****__**__***__**____________________________________________**___*___*__*_____***__*___________________________________*__*________*___*_**
#=GC scorecons_90         _________**__*****_**_***__**_**__*_______**_*________*__*_________*_______________*_____*___**_**__***__***_*_______*_*_**__**_***_*_**__*________*_*_**_____******_*______****__*___***________________________________________________**___*___*__*______**__*______________________________________*________*___*_**
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