# STOCKHOLM 1.0
#=GF ID 3.40.532.10/FF/000016
#=GF DE Ubiquitin carboxyl-terminal hydrolase
#=GF AC 3.40.532.10/FF/000016
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.474
#=GS Q54N38/1-220      AC Q54N38
#=GS Q54N38/1-220      OS Dictyostelium discoideum
#=GS Q54N38/1-220      DE Ubiquitin carboxyl-terminal hydrolase isozyme L5
#=GS Q54N38/1-220      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54N38/1-220      DR EC; 3.4.19.12; 
#=GS Q8T487/16-242     AC Q8T487
#=GS Q8T487/16-242     OS Drosophila melanogaster
#=GS Q8T487/16-242     DE Ubiquitin carboxyl-terminal hydrolase
#=GS Q8T487/16-242     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8T487/16-242     DR GO; GO:0004843; GO:0005838; GO:0006511; GO:0016579; 
#=GS Q9VYQ3/16-242     AC Q9VYQ3
#=GS Q9VYQ3/16-242     OS Drosophila melanogaster
#=GS Q9VYQ3/16-242     DE Ubiquitin carboxyl-terminal hydrolase
#=GS Q9VYQ3/16-242     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VYQ3/16-242     DR GO; GO:0004843; GO:0005838; GO:0006511; GO:0016579; 
#=GS B3RUP4/1-230      AC B3RUP4
#=GS B3RUP4/1-230      OS Trichoplax adhaerens
#=GS B3RUP4/1-230      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B3RUP4/1-230      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS W4YJT5/1-234      AC W4YJT5
#=GS W4YJT5/1-234      OS Strongylocentrotus purpuratus
#=GS W4YJT5/1-234      DE Ubiquitin carboxyl-terminal hydrolase
#=GS W4YJT5/1-234      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS B8CAQ2/1-252      AC B8CAQ2
#=GS B8CAQ2/1-252      OS Thalassiosira pseudonana
#=GS B8CAQ2/1-252      DE Ubiquitin carboxyl-terminal hydrolase
#=GS B8CAQ2/1-252      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS F0ZA93/2-220      AC F0ZA93
#=GS F0ZA93/2-220      OS Dictyostelium purpureum
#=GS F0ZA93/2-220      DE Ubiquitin carboxyl-terminal hydrolase
#=GS F0ZA93/2-220      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A0A369S8W2/1-240  AC A0A369S8W2
#=GS A0A369S8W2/1-240  OS Trichoplax sp. H2
#=GS A0A369S8W2/1-240  DE Ubiquitin carboxyl-terminal hydrolase
#=GS A0A369S8W2/1-240  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GF SQ 8
Q54N38/1-220              ---MSENEGWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRL---------KPVLGLIFLFKWEKEEENR------------TISDN---------ENIFFANQVIQNACATQAILSVLLN--SEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQD-PFIFSKKKNRK----PSDAFHFISFIPFQGK--VYELDGLKKGPYCLGDC-TPD--------NWLEIATPFIQKRMEKY-SQGE----IRFNLMAVIKNR-
Q8T487/16-242             TKEATAANNWCLIESDPGVFTEMISGFGCTGAEVEEIWSIKADAFRHL---------EPIHGLIFLFKWLDDKPAGR-----------VVTDR---------SDIFFARQVIPNACATQALLCLLLNLEHEDIDLGQTLTDLRNLCQDLDPECRGHRLANEEKIRKVHNSFARPE-LFVVEESTDFI----EDDCYHFVGFMPIKGK--LFELDGMHEGPIELADIDQQQ--------NWLDVVRPIIAARMERY-SVGE----IHFNLMALVSDR-
Q9VYQ3/16-242             TKEATAANNWCLIESDPGVFTEMISGFGCTGAEVEEIWSIKADAFRHL---------EPIHGLIFLFKWLDDKPAGR-----------VVTDR---------SDIFFARQVIPNACATQALLCLLLNLQHEDIDLGQTLTDLRNLCQDLDPECRGHRLANEEKIRKVHNSFARPE-LFVVEESTDFI----EDDCYHFVGFMPIKGK--LFELDGMHEGPIELADIDQQQ--------NWLDVVRPIIEARMERY-SVGE----IHFNLMALVSDR-
B3RUP4/1-230              ---MANSDGWRELESDP----------GVTGVEVEEIYDLSEPF------------DRKIYGFIFLFKWTKDRRSRRMMQ-------EQLQAEQYAYDTTIANRIFFAQQLIPNSCATHALLSILLN--SPSIEVGETLSEFRQFTKDHNPEVKGLAIGNVSKLVKAHNNHARPENRHVNTRGSVSH--GQSAESFHFVSYLPIDDH--LYELDGLKPYPIDHGVLPEGE--------NWTEMFRRVIKARLGME-TNNEPCHDIRYNLMSIVADKR
W4YJT5/1-234              -----MAGEWLELESDPGVFTLLVQEFGTKGVQVEEVYDLQKPI------------DGPVYGFIFLFKWIEERRARRKVQ--------SIADDAYVTNPGLLKDMFFAHQMVPNSCATHALLSILLN--CQDITLGKTLSNFKEFTKNFSPEDRGEAIGNVPEIAQAHNAHAHPEPPRLPEKATGGI--TRARETFHFVSYVPIGGR--LYELDGLKRGPLDHGPWDEKE--------EWTAKFQRVIADRLENEGGSSD----IRFSLMAVVADKK
B8CAQ2/1-252              --MSDGNNDWCTIESDPGVFTSLIESFGVKNVELSELWSLDDESLLSLTNPMEGVENASVHGLIFLFKWQSSHAGNTNDNSPEEETGKALVGE------DVPNDLFFAKQVTHNACATQAILSVL------RLVLGSTLSNFKSFTSHFPPDLRGEAIGSSDEIRTAHNSFGRAEDAFLSDPSKPKRIATDDDDVFHFVAYVPNDKDECVYELDGLKEGPIRVGSY-KKEGEDGNSTLQWVQVARDSIQNRLSHY-SPTE----IKFNLMAM-----
F0ZA93/2-220              ----GDNEGWCTIESDPGVFTELIDKIGVKDIQVEEIYSLDSSEYDRL---------KPVLGLIFLFKWEKDDDNR------------QISDN---------QDLFFANQVIQNACATQAILSVLLN--AEGIELGEELSNFKQFVGDFPPMMKGEAIGNSDLIKTTHNSFTVQD-PFIFSKSKSKK----PQDAFHFISFIPFQGK--VYELDGLKEGPYCLGDC-TPE--------NWLEVATPFIQKRIEKY-SQGE----IRFNLMAVIKNR-
A0A369S8W2/1-240          ---MANSDGWRELESDPGLFTLLIEDMGVTGVEVEEIYDLSEPF------------DRKIYGFIFLFKWTKDRRSRRMMQ-------EQLQAEQYAYDTTIANRIFFAQQLIPNSCATHALLSILLN--SPSIEVGETLSEFRQFTKDHNPEVKGLAIGNVSKLVKAHNNHARPENRHVNTRGSVSH--GQSAESFHFVSYLPIDDH--LYELDGLKPYPIDHGVLPEGE--------NWTEMFRRVIKARLGME-TNNEPCHDIRYNLMSIVADKR
#=GC scorecons            0002234449436999965662552239455567796547433211130000000013464969999992454345300100000000353540000000104569994966596999696965966002347469469657647436439536936767344634599555457034524444223001033737997575944540067999976459534633143600000000694544544944965340534800009677996553440
#=GC scorecons_70         _________*__******_**______*____****___*___________________*_********____________________________________***_*_*_*_********_***_____*_**_***_**_*_____*__**__***___*___**_____*__________________*_****_*_*______********__*___*_____*_________*_______*__*________*____*_*****______
#=GC scorecons_80         _________*___****__________*_____*_*_________________________*_******____________________________________***_*___*_***_*_*__*_______*__*__*___________*___*____*_______**_____*____________________****_*_*_______******___*___________________*_______*__*________*____*_****_______
#=GC scorecons_90         _________*___****__________*_______*_________________________*_******____________________________________***_*___*_***_*_*__*__________*__*___________*___*____________**___________________________**____*________****____*___________________*_______*__*_____________*___**_______
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