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CATH Superfamily 3.40.1810.10

Transcription factor, MADS-box

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Transcription factor, MADS-box
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Browse Functional Families

ID Function Family (FunFam) Name Total Sequences Enzyme? Structure? Structural Representative PDB Sites? Alignment Diversity (0-100)
1
Myocyte-specific enhancer factor 2A homolog
2001
3D
 6bz1D01 - 74.2
2
Serum response factor b
1162
3D
 1srsB01 - 92.3
3
MADS-box transcription factor MADS-MC
379 - - 92.5
4
MADS-box transcription factor 1
267 - - 71.3
5
MADS-box transcription factor 21
242 - - 75.3
6
Agamous-like MADS-box protein AGL62
195 - - 97.9
7
Transcription factor, MADS-box
142 - - 83.3
8
MADS-box transcription factor 1
117 - - 81.1
9
agamous-like MADS-box protein AGL11
117 - - 69.8
10
Agamous-like MADS-box protein AGL30
111 - - 76.7
11
MADS-box transcription factor 7
79 - - 62.9
12
MADS-box protein SOC1
77 - - 72.3
13
Transcription factor, MADS-box
76 - - 80.2
14
MADS-box transcription factor 41
64 - - 71.8
15
MADS-box transcription factor 32
43 - - 35.0
16
MADS-box transcription factor 16
41 - - 70.9
17
PISTILLATA-like MADS-box transcription factor
40 - - 62.7
18
agamous-like MADS-box protein AGL80
28 - - 76.8
19
Agamous-like MADS-box protein AGL8
26 - - 68.3
20
MADS-box protein FLOWERING LOCUS C
24 - - 62.3
21
AGAMOUS-like 21
23 - - 52.7
22
MIKC MADS-domain protein PpMADS3
19 - - 44.2
23
MADS-box protein-like
17 - - 84.8
24
Agamous-like MADS-box protein AGL80
17 - - 92.4
25
AGAMOUS-like 76
16 - - 75.7
26
MADS-box transcription factor 29
14 - - 47.9
27
Os01g0213300 protein
14 - - 50.9
28
Agamous-like MADS-box protein AGL66 isoform A
11 - - 73.7
29
MADS transcription factor
10 - - 29.3
30
Agamous-like MADS-box protein AGL13
10 - - 65.1
31
MADS-box transcription factor 54
9 - - 72.5
32
MADS transcription factor
9 - - 43.5
33
Agamous-like MADS-box protein AGL53
8 - - 34.8
34
Os09g0116000 protein
8 - - 2.0
36
Agamous-like MADS-box protein AGL3 isoform A
7 - - 14.8
37
MADS-box protein SVP isoform B
7 - - 8.3
38
MADS-box transcription factor 34
7 - - 5.8
35
MADS-box transcription factor 13
7 - - 41.0
39
Agamous-like MADS-box protein AGL62
6 - - 34.2
40
Uncharacterized protein
6 - - 38.6
41
Agamous-like MADS-box protein AGL80
6 - - 19.7
42
Os01g0912400 protein
6 - - 4.4
43
Uncharacterized protein
5 - - 46.4
44
AGAMOUS-like 101
5 - - 70.7
46
Agamous-like MADS-box protein AGL92
5 - - 79.7
45
Floral homeotic protein APETALA 1
5 - - 9.6
48
4 - - 32.1
49
4 - - 10.4
50
AGAMOUS-like 15
4 - - 7.3
51
4 - - 13.0
52
MADS-box transcription factor pvg4
4 - - 69.6
47
4 - - 24.0
55
3 - - 3.5
56
3 - - 75.6
53
3 - - 48.0
54
3 - - 5.3
61
2 - - 14.7
68
2 - - 9.3
60
2 - - 46.5
69
2 - - 0.0
63
2 - - 7.1
62
2 - - 3.0
70
2 - - 0.0
58
2 - - 41.1
57
2 - - 13.8
64
2 - - 0.0
65
2 - - 2.6
66
2 - - 0.0
59
2 - - 42.7
67
2 - - 0.0
78
1 - - 0.0
80
1 - - 0.0
82
1 - - 0.0
81
1 - - 0.0
76
1 - - 0.0
84
1 - - 0.0
77
1 - - 0.0
79
1 - - 0.0
83
1 - - 0.0
71
1 - - 0.0
85
1 - - 0.0
74
1 - - 0.0
86
1 - - 0.0
75
1 - - 0.0
72
1 - - 0.0
73
1 - - 0.0